HLA-DQB2, chr6:32723875-32731311 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9275503 chr6:32673931 HLA-DQA2 [-35188bp] All: C 99,286 13 G vs. A 0.175 (G) - 0.78 (0.73-0.84) 0 (0-56) 1.84e-12
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All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2857146 chr6:32770983 HLA-DOB [-9557bp] C - 12 A vs. G 0.342 (G) 0.367 (G) <1 (-) 0 (-) >0.05
rs2857115 chr6:32778281 HLA-DOB [-2259bp] C - 12 A vs. G 0.325 (A) 0.367 (A) >1 (-) 9 (-) >0.05
rs2857138 chr6:32775496 HLA-DOB [-5044bp] C - 12 A vs. G 0.342 (A) 0.367 (A) >1 (-) 0 (-) >0.05
rs2127674 chr6:32777150 HLA-DOB [-3390bp] C - 12 A vs. G 0.333 (G) 0.342 (G) <1 (-) 0 (-) >0.05
rs2621337 chr6:32776649 HLA-DOB [-3891bp] C - 12 T vs. C 0.333 (T) 0.367 (T) >1 (-) 0 (-) >0.05
rs2621338 chr6:32776583 HLA-DOB [-3957bp] C - 12 A vs. G 0.342 (A) 0.367 (A) >1 (-) 0 (-) >0.05
rs6457680 chr6:32770688 HLA-DOB [-9852bp] C - 12 A vs. T 0.267 (A) 0.375 (A) <1 (-) 0 (-) >0.05
rs2621366 chr6:32768980 HLA-DOB [-11560bp] C - 12 A vs. C 0.342 (A) 0.375 (A) >1 (-) 0 (-) >0.05
rs57007283 chr6:32708560 HLA-DQA2 [-559bp] C - 4 T vs. C 0.008 (T) - <1 (-) 44 (-) >0.05
rs59593022 chr6:32708747 HLA-DQA2 [-372bp] C - 4 A vs. C - 0.033 (A) <1 (-) 44 (-) >0.05
rs28666756 chr6:32707665 HLA-DQA2 [-1454bp] C - 4 A vs. G - 0.025 (A) <1 (-) 44 (-) >0.05
rs28421301 chr6:32707387 HLA-DQA2 [-1732bp] C - 4 T vs. C - 0.033 (C) >1 (-) 44 (-) >0.05
rs2857132 chr6:32776179 HLA-DOB [-4361bp] C - 12 A vs. G 0.342 (A) 0.367 (A) >1 (-) 0 (-) >0.05
rs113734161 chr6:32703277 HLA-DQA2 [-5842bp] C - 6 T vs. C 0.008 (T) - <1 (-) 34 (-) >0.05
rs6925725 chr6:32703942 HLA-DQA2 [-5177bp] C - 6 A vs. C - - >1 (-) 34 (-) >0.05
rs2621333 chr6:32778263 HLA-DOB [-2277bp] C - 12 T vs. C 0.342 (T) 0.367 (T) >1 (-) 0 (-) >0.05
rs73398730 chr6:32703744 HLA-DQA2 [-5375bp] C - 6 T vs. C 0.008 (C) 0.033 (C) >1 (-) 34 (-) >0.05
rs2857119 chr6:32777853 HLA-DOB [-2687bp] C - 12 T vs. C 0.342 (T) 0.367 (T) >1 (-) 0 (-) >0.05
rs2857120 chr6:32777605 HLA-DOB [-2935bp] C - 12 T vs. C 0.342 (C) 0.367 (C) <1 (-) 0 (-) >0.05
rs113936637 chr6:32750260 HLA-DQB2 [+18949bp] C - 12 A vs. T 0.083 (A) - >1 (-) 0 (-) >0.05
rs2857117 chr6:32778026 HLA-DOB [-2514bp] C - 12 T vs. C 0.325 (T) 0.367 (T) >1 (-) 0 (-) >0.05
rs2857118 chr6:32777900 HLA-DOB [-2640bp] C - 12 A vs. G 0.342 (A) 0.358 (A) >1 (-) 0 (-) >0.05
rs3892710 chr6:32682862 HLA-DQA2 [-26257bp] C - 11 T vs. C 0.167 (T) 0.067 (T) <1 (-) 0 (-) >0.05
rs2621339 chr6:32775582 HLA-DOB [-4958bp] C - 12 A vs. C 0.342 (A) 0.367 (A) >1 (-) 0 (-) >0.05
rs2621347 chr6:32772669 HLA-DOB [-7871bp] C - 12 A vs. G 0.342 (A) 0.367 (A) >1 (-) 0 (-) >0.05
rs9501215 chr6:32772404 HLA-DOB [-8136bp] C - 12 T vs. G 0.342 (T) 0.358 (T) >1 (-) 0 (-) >0.05
rs73402884 chr6:32728393 HLA-DQB2 C - 4 A vs. T - - <1 (-) 17 (-) >0.05
rs113721192 chr6:32682590 HLA-DQA2 [-26529bp] C - 4 A vs. G 0.008 (A) 0.042 (A) <1 (-) 0 (-) >0.05
rs6920126 chr6:32763160 HLA-DOB [-17380bp] C - 6 T vs. G - - >1 (-) 50 (-) >0.05
rs2857148 chr6:32768314 HLA-DOB [-12226bp] C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs10364 chr6:32780572 HLA-DOB C - 12 T vs. C 0.092 (C) 0.175 (C) <1 (-) 41 (-) >0.05
rs2857149 chr6:32768312 HLA-DOB [-12228bp] C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs2621369 chr6:32768285 HLA-DOB [-12255bp] C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs17427887 chr6:32679107 HLA-DQA2 [-30012bp] C - 8 T vs. G 0.025 (T) - >1 (-) 53 (-) >0.05
rs2857212 chr6:32740411 HLA-DQB2 [+9100bp] C - 12 A vs. G 0.408 (G) 0.483 (G) <1 (-) 18 (-) >0.05
rs114756943 chr6:32719882 MIR3135B [+2126bp] C - 3 A vs. T - - <1 (-) 0 (-) >0.05
rs79017203 chr6:32709543 HLA-DQA2 C - 3 T vs. C - 0.042 (C) >1 (-) 61 (-) >0.05
rs7771968 chr6:32709532 HLA-DQA2 C - 3 T vs. C 0.008 (C) - >1 (-) 61 (-) >0.05
rs28459946 chr6:32709709 HLA-DQA2 C - 3 T vs. C - 0.042 (C) >1 (-) 61 (-) >0.05
rs7755792 chr6:32709732 HLA-DQA2 C - 3 T vs. C 0.008 (T) 0.033 (T) <1 (-) 61 (-) >0.05
rs28459982 chr6:32709422 HLA-DQA2 C - 3 A vs. T 0.008 (T) 0.025 (T) >1 (-) 61 (-) >0.05
rs9276410 chr6:32710396 HLA-DQA2 C - 11 A vs. G 0.417 (A) 0.217 (G) >1 (-) 17 (-) >0.05
rs112333001 chr6:32709317 HLA-DQA2 C - 3 A vs. G - - <1 (-) 61 (-) >0.05
rs10947331 chr6:32676925 HLA-DQA2 [-32194bp] C - 8 A vs. G - - >1 (-) 0 (-) >0.05
rs17219302 chr6:32680725 HLA-DQA2 [-28394bp] C - 11 T vs. C 0.192 (C) 0.375 (C) <1 (-) 26 (-) >0.05
rs17219309 chr6:32680727 HLA-DQA2 [-28392bp] C - 11 A vs. C 0.183 (C) 0.367 (C) <1 (-) 26 (-) >0.05
rs9276807 chr6:32780156 HLA-DOB [-384bp] C - 12 A vs. G 0.267 (A) 0.292 (A) <1 (-) 0 (-) >0.05
rs112692718 chr6:32685027 HLA-DQA2 [-24092bp] C - 5 A vs. T 0.008 (T) - >1 (-) 8 (-) >0.05
rs1794268 chr6:32674065 HLA-DQA2 [-35054bp] C - 8 T vs. C 0.033 (C) 0.058 (C) <1 (-) 0 (-) >0.05
rs1794265 chr6:32674737 HLA-DQA2 [-34382bp] C - 8 A vs. C 0.033 (G) 0.108 (A) >1 (-) 0 (-) >0.05

Association studies for this region [+]