HLA-DQB2, chr6:32723875-32731311 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9275503 chr6:32673931 HLA-DQA2 [-35188bp] All: C 99,286 13 G vs. A 0.175 (G) - 0.78 (0.73-0.84) 0 (0-56) 1.84e-12
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All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs7748699 chr6:32773883 HLA-DOB [-6657bp] C - 12 C vs. G 0.267 (G) 0.383 (G) >1 (-) 0 (-) >0.05
rs7748681 chr6:32773858 HLA-DOB [-6682bp] C - 12 A vs. C 0.258 (A) 0.383 (A) <1 (-) 0 (-) >0.05
rs7382619 chr6:32775809 HLA-DOB [-4731bp] C - 12 T vs. C 0.267 (T) 0.358 (T) <1 (-) 0 (-) >0.05
rs4947351 chr6:32771144 HLA-DOB [-9396bp] C - 12 T vs. C - - >1 (-) 38 (-) >0.05
rs2621373 chr6:32765130 HLA-DOB [-15410bp] C - 11 T vs. C 0.342 (C) 0.367 (C) <1 (-) 0 (-) >0.05
rs7755858 chr6:32770111 HLA-DOB [-10429bp] C - 12 A vs. C 0.258 (C) 0.383 (C) >1 (-) 0 (-) >0.05
rs2858333 chr6:32681085 HLA-DQA2 [-28034bp] C - 11 A vs. G 0.183 (G) 0.367 (G) <1 (-) 34 (-) >0.05
chr6:32745517 chr6:32745517 HLA-DQB2 [+14206bp] C - 4 A vs. C - - >1 (-) 0 (-) >0.05
rs6929904 chr6:32777319 HLA-DOB [-3221bp] C - 12 A vs. C 0.267 (C) 0.383 (C) >1 (-) 0 (-) >0.05
rs7381867 chr6:32777556 HLA-DOB [-2984bp] C - 12 T vs. G 0.267 (G) 0.383 (G) >1 (-) 0 (-) >0.05
rs2647087 chr6:32681049 HLA-DQA2 [-28070bp] C - 11 A vs. C 0.183 (C) 0.367 (C) <1 (-) 33 (-) >0.05
rs7745656 chr6:32680970 HLA-DQA2 [-28149bp] C - 11 T vs. G 0.183 (T) 0.367 (T) >1 (-) 33 (-) >0.05
rs7381376 chr6:32767673 HLA-DOB [-12867bp] C - 12 C vs. G 0.275 (G) 0.383 (G) >1 (-) 0 (-) >0.05
rs79771376 chr6:32746897 HLA-DQB2 [+15586bp] C - 12 A vs. G 0.092 (G) 0.183 (G) <1 (-) 36 (-) >0.05
rs9276760 chr6:32773102 HLA-DOB [-7438bp] C - 12 T vs. G 0.267 (T) 0.392 (T) <1 (-) 0 (-) >0.05
rs9276763 chr6:32773262 HLA-DOB [-7278bp] C - 12 A vs. G 0.267 (A) 0.383 (A) <1 (-) 0 (-) >0.05
rs4947348 chr6:32747410 HLA-DQB2 [+16099bp] C - 12 T vs. G 0.092 (G) 0.183 (G) <1 (-) 35 (-) >0.05
rs9276762 chr6:32773202 HLA-DOB [-7338bp] C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs7740209 chr6:32767432 HLA-DOB [-13108bp] C - 12 T vs. C 0.267 (T) 0.383 (T) <1 (-) 0 (-) >0.05
rs3916766 chr6:32681645 HLA-DQA2 [-27474bp] C - 11 A vs. T 0.183 (A) 0.367 (A) >1 (-) 31 (-) >0.05
rs28371347 chr6:32680537 HLA-DQA2 [-28582bp] C - 11 T vs. C 0.192 (C) 0.358 (C) <1 (-) 31 (-) >0.05
rs28371346 chr6:32680532 HLA-DQA2 [-28587bp] C - 11 T vs. C 0.192 (C) 0.358 (C) <1 (-) 31 (-) >0.05
rs2858332 chr6:32681161 HLA-DQA2 [-27958bp] C - 12 T vs. G 0.492 (T) 0.392 (G) <1 (-) 24 (-) >0.05
rs9501184 chr6:32680199 HLA-DQA2 [-28920bp] C - 11 A vs. G 0.183 (A) 0.35 (A) >1 (-) 30 (-) >0.05
rs6919657 chr6:32770443 HLA-DOB [-10097bp] C - 12 A vs. C 0.275 (C) 0.383 (C) >1 (-) 0 (-) >0.05
rs6899857 chr6:32770482 HLA-DOB [-10058bp] C - 12 T vs. C 0.267 (C) 0.383 (C) >1 (-) 0 (-) >0.05
rs7383606 chr6:32766593 HLA-DOB [-13947bp] C - 12 T vs. C 0.267 (T) 0.383 (T) <1 (-) 0 (-) >0.05
rs9276734 chr6:32766854 HLA-DOB [-13686bp] C - 12 A vs. G 0.267 (A) 0.383 (A) <1 (-) 0 (-) >0.05
rs7382679 chr6:32767170 HLA-DOB [-13370bp] C - 12 T vs. G 0.267 (G) 0.383 (G) >1 (-) 0 (-) >0.05
rs7383562 chr6:32766345 HLA-DOB [-14195bp] C - 12 A vs. G 0.267 (G) 0.383 (G) >1 (-) 0 (-) >0.05
rs7383602 chr6:32766433 HLA-DOB [-14107bp] C - 12 C vs. G 0.267 (C) 0.383 (C) <1 (-) 0 (-) >0.05
rs9276745 chr6:32771411 HLA-DOB [-9129bp] C - 12 T vs. G 0.267 (T) 0.375 (T) <1 (-) 0 (-) >0.05
rs1383261 chr6:32765451 HLA-DOB [-15089bp] C - 12 T vs. C 0.267 (T) 0.383 (T) <1 (-) 0 (-) >0.05
rs73396649 chr6:32682928 HLA-DQA2 [-26191bp] C - 3 T vs. C - - <1 (-) 0 (-) >0.05
rs9276778 chr6:32775312 HLA-DOB [-5228bp] C - 12 A vs. G 0.267 (A) 0.383 (A) <1 (-) 0 (-) >0.05
rs17213630 chr6:32775253 HLA-DOB [-5287bp] C - 12 A vs. G 0.092 (A) 0.2 (A) >1 (-) 39 (-) >0.05
rs17219974 chr6:32762756 HLA-DOB [-17784bp] C - 10 A vs. T 0.025 (T) - >1 (-) 0 (-) >0.05
rs116098592 chr6:32681820 HLA-DQA2 [-27299bp] C - 8 T vs. C 0.033 (T) 0.075 (T) >1 (-) 0 (-) >0.05
rs116953562 chr6:32676388 HLA-DQA2 [-32731bp] C - 4 A vs. G - 0.017 (G) <1 (-) 18 (-) >0.05
rs2647085 chr6:32680124 HLA-DQA2 [-28995bp] C - 11 T vs. C 0.167 (C) 0.367 (C) <1 (-) 33 (-) >0.05
rs9276749 chr6:32771964 HLA-DOB [-8576bp] C - 12 T vs. G 0.267 (G) 0.375 (G) >1 (-) 0 (-) >0.05
rs9276726 chr6:32763888 HLA-DOB [-16652bp] C - 12 T vs. C 0.267 (C) 0.375 (C) >1 (-) 0 (-) >0.05
rs7383081 chr6:32777540 HLA-DOB [-3000bp] C - 12 T vs. C 0.267 (T) 0.375 (T) <1 (-) 0 (-) >0.05
rs9276492 chr6:32718828 MIR3135B [+1072bp] C - 11 T vs. C 0.092 (T) - <1 (-) 0 (-) >0.05
rs9276491 chr6:32718827 MIR3135B [+1071bp] C - 11 A vs. G 0.092 (G) - >1 (-) 0 (-) >0.05
rs1054684 chr6:32776921 HLA-DOB [-3619bp] C - 12 T vs. C 0.092 (C) - >1 (-) 17 (-) >0.05
rs7381315 chr6:32767251 HLA-DOB [-13289bp] C - 12 A vs. G 0.267 (G) 0.383 (G) >1 (-) 0 (-) >0.05
rs9391744 chr6:32680227 HLA-DQA2 [-28892bp] C - 11 T vs. C 0.183 (T) 0.367 (T) >1 (-) 31 (-) >0.05
rs17581425 chr6:32680585 HLA-DQA2 [-28534bp] C - 11 T vs. C 0.2 (C) 0.358 (C) <1 (-) 33 (-) >0.05
rs9275658 chr6:32685989 HLA-DQA2 [-23130bp] C - 11 C vs. G 0.35 (C) 0.25 (G) >1 (-) 22 (-) >0.05

Association studies for this region [+]