HLA-DQB2, chr6:32723875-32731311 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region
Append your own data and create meta-analysis

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9275503 chr6:32673931 HLA-DQA2 [-35188bp] All: C 99,286 13 G vs. A 0.175 (G) - 0.78 (0.73-0.84) 0 (0-56) 1.84e-12
Meta_image?name=rs9275503

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
chr6:32727985 chr6:32727985 HLA-DQB2 C - 5 C vs. G - - <1 (-) 0 (-) >0.05
rs112802378 chr6:32675358 HLA-DQA2 [-33761bp] C - 4 T vs. C - 0.033 (T) >1 (-) 20 (-) >0.05
rs5024432 chr6:32684468 HLA-DQA2 [-24651bp] C - 10 T vs. C 0.075 (T) 0.067 (T) <1 (-) 0 (-) >0.05
rs115263321 chr6:32728340 HLA-DQB2 C - 6 T vs. C 0.008 (T) - >1 (-) 0 (-) >0.05
rs9276504 chr6:32719745 MIR3135B [+1989bp] C - 10 T vs. C 0.083 (C) - >1 (-) 15 (-) >0.05
rs6917611 chr6:32774954 HLA-DOB [-5586bp] C - 12 C vs. G 0.358 (C) 0.433 (C) <1 (-) 0 (-) >0.05
rs9275653 chr6:32685865 HLA-DQA2 [-23254bp] C - 12 A vs. G 0.45 (G) 0.25 (G) >1 (-) 18 (-) >0.05
rs9276451 chr6:32715685 HLA-DQA2 [+693bp] C - 11 T vs. C 0.083 (T) - <1 (-) 10 (-) >0.05
rs9275588 chr6:32680423 HLA-DQA2 [-28696bp] C - 12 A vs. G 0.5 (G) 0.442 (G) <1 (-) 28 (-) >0.05
rs144345506 chr6:32683586 HLA-DQA2 [-25533bp] C - 9 A vs. G - - <1 (-) 0 (-) >0.05
rs9275589 chr6:32680441 HLA-DQA2 [-28678bp] C - 12 T vs. G 0.492 (G) 0.433 (T) >1 (-) 27 (-) >0.05
rs150909029 chr6:32772903 HLA-DOB [-7637bp] C - 11 A vs. G - - >1 (-) 0 (-) >0.05
rs9276408 chr6:32710370 HLA-DQA2 C - 10 T vs. G 0.383 (T) 0.325 (T) <1 (-) 18 (-) >0.05
rs142944862 chr6:32707588 HLA-DQA2 [-1531bp] C - 3 A vs. G - - <1 (-) 50 (-) >0.05
rs9276733 chr6:32766026 HLA-DOB [-14514bp] C - 12 A vs. G 0.267 (G) 0.358 (G) >1 (-) 0 (-) >0.05
rs2859072 chr6:32703313 HLA-DQA2 [-5806bp] C - 11 A vs. G 0.225 (A) 0.467 (A) >1 (-) 13 (-) >0.05
rs2239800 chr6:32713267 HLA-DQA2 C - 12 A vs. G 0.042 (G) 0.333 (G) <1 (-) 29 (-) >0.05
rs6912002 chr6:32765268 HLA-DOB [-15272bp] C - 12 T vs. C 0.267 (C) 0.383 (C) >1 (-) 0 (-) >0.05
rs6937723 chr6:32766003 HLA-DOB [-14537bp] C - 12 A vs. T 0.267 (T) 0.392 (T) >1 (-) 0 (-) >0.05
rs6937875 chr6:32766041 HLA-DOB [-14499bp] C - 12 T vs. C 0.267 (T) 0.392 (T) <1 (-) 0 (-) >0.05
rs9276772 chr6:32774291 HLA-DOB [-6249bp] C - 12 C vs. G 0.092 (G) - >1 (-) 19 (-) >0.05
rs11244 chr6:32780724 HLA-DOB C - 12 A vs. G 0.233 (A) 0.317 (A) <1 (-) 0 (-) >0.05
rs1383264 chr6:32739967 HLA-DQB2 [+8656bp] C - 12 A vs. T 0.467 (A) 0.217 (A) <1 (-) 17 (-) >0.05
rs7762279 chr6:32755290 HLA-DQB2 [+23979bp] C - 12 T vs. C 0.092 (C) - >1 (-) 20 (-) >0.05
rs17213554 chr6:32759694 HLA-DOB [-20846bp] C - 10 T vs. G 0.017 (G) - >1 (-) 0 (-) >0.05
rs9276700 chr6:32756653 HLA-DOB [-23887bp] C - 12 T vs. C - - <1 (-) 20 (-) >0.05
rs28724893 chr6:32744440 HLA-DQB2 [+13129bp] C - 12 T vs. C 0.475 (C) 0.258 (T) <1 (-) 38 (-) >0.05
rs9276691 chr6:32752844 HLA-DQB2 [+21533bp] C - 12 A vs. G 0.083 (G) - >1 (-) 21 (-) >0.05
rs719655 chr6:32752333 HLA-DQB2 [+21022bp] C - 12 T vs. C 0.092 (T) - <1 (-) 21 (-) >0.05
rs9276688 chr6:32751244 HLA-DQB2 [+19933bp] C - 12 T vs. C 0.1 (T) - <1 (-) 20 (-) >0.05
rs9276572 chr6:32725625 HLA-DQB2 C - 6 T vs. C - - >1 (-) 0 (-) >0.05
rs9276689 chr6:32751962 HLA-DQB2 [+20651bp] C - 12 T vs. C 0.1 (T) - <1 (-) 20 (-) >0.05
rs9275660 chr6:32686196 HLA-DQA2 [-22923bp] C - 11 A vs. C 0.2 (A) 0.075 (A) >1 (-) 0 (-) >0.05
rs9276731 chr6:32765585 HLA-DOB [-14955bp] C - 12 T vs. G 0.083 (T) - <1 (-) 25 (-) >0.05
rs2859070 chr6:32703540 HLA-DQA2 [-5579bp] C - 5 A vs. T - 0.092 (T) >1 (-) 29 (-) >0.05
rs112136957 chr6:32682165 HLA-DQA2 [-26954bp] C - 8 T vs. C 0.042 (C) 0.067 (C) <1 (-) 0 (-) >0.05
rs9276450 chr6:32715682 HLA-DQA2 [+690bp] C - 11 A vs. C 0.083 (A) - <1 (-) 13 (-) >0.05
rs111673066 chr6:32735964 HLA-DQB2 [+4653bp] C - 10 A vs. G 0.008 (A) - >1 (-) 0 (-) >0.05
rs78084276 chr6:32778326 HLA-DOB [-2214bp] C - 12 T vs. G 0.033 (T) 0.042 (T) <1 (-) 0 (-) >0.05
rs3129730 chr6:32681839 HLA-DQA2 [-27280bp] C - 11 A vs. G 0.075 (G) 0.025 (G) >1 (-) 0 (-) >0.05
rs17212846 chr6:32675581 HLA-DQA2 [-33538bp] C - 11 A vs. T 0.083 (T) - >1 (-) 0 (-) >0.05
rs9275664 chr6:32686434 HLA-DQA2 [-22685bp] C - 12 A vs. G 0.467 (G) 0.25 (G) >1 (-) 19 (-) >0.05
rs2621341 chr6:32775213 HLA-DOB [-5327bp] C - 4 C vs. G - 0.008 (C) >1 (-) 0 (-) >0.05
rs115683811 chr6:32747258 HLA-DQB2 [+15947bp] C - 10 A vs. G 0.033 (G) - <1 (-) 0 (-) >0.05
rs6937727 chr6:32766020 HLA-DOB [-14520bp] C - 12 A vs. G 0.267 (G) 0.375 (G) >1 (-) 0 (-) >0.05
rs6938180 chr6:32766014 HLA-DOB [-14526bp] C - 12 A vs. G 0.25 (A) 0.392 (A) <1 (-) 0 (-) >0.05
rs4318925 chr6:32761506 HLA-DOB [-19034bp] C - 12 T vs. C 0.1 (T) 0.075 (T) <1 (-) 11 (-) >0.05
rs117610182 chr6:32711984 HLA-DQA2 C - 5 A vs. G - 0.133 (A) >1 (-) 0 (-) >0.05
rs4947349 chr6:32747790 HLA-DQB2 [+16479bp] C - 12 T vs. G 0.092 (T) - <1 (-) 9 (-) >0.05
rs28557364 chr6:32687319 HLA-DQA2 [-21800bp] C - 9 T vs. C - - <1 (-) 0 (-) >0.05

Association studies for this region [+]