HLA-DRA, chr6:32407619-32412823 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2395163 chr6:32387809 BTNL2 [+12904bp] All: C 103,235 14 C vs. T 0.283 (C) 0.1 (C) 0.87 (0.84-0.91) 0 (0-54) 5.00e-12
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All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2395163 chr6:32387809 BTNL2 [+12904bp] All: C 103,235 14 C vs. T 0.283 (C) 0.1 (C) 0.87 (0.84-0.91) 0 (0-54) 5.00e-12
rs9268484 chr6:32368513 BTNL2 All: C 103,235 14 C vs. T - - 1.17 (1.12-1.22) 0 (0-43) 7.34e-12
rs3793127 chr6:32371915 BTNL2 All: C 103,235 14 T vs. C 0.275 (T) 0.108 (T) 0.87 (0.84-0.91) 0 (0-53) 7.99e-12
rs3763309 chr6:32375973 BTNL2 [+1068bp] All: C 103,235 14 A vs. C 0.275 (A) 0.108 (A) 0.87 (0.84-0.91) 0 (0-53) 8.41e-12
rs9268926 chr6:32433067 HLA-DRA [+20244bp] All: C 96,523 12 G vs. A 0.275 (G) 0.058 (G) 0.84 (0.79-0.88) 0 (0-39) 8.70e-12
rs9268838 chr6:32428715 HLA-DRA [+15892bp] All: C 100,472 13 A vs. G 0.358 (A) 0.367 (A) 0.87 (0.84-0.91) 0 (0-21) 9.37e-12
rs3763312 chr6:32376348 BTNL2 [+1443bp] All: C 103,235 14 A vs. G 0.275 (A) 0.108 (A) 0.87 (0.84-0.91) 0 (0-51) 1.20e-11
rs9268522 chr6:32381443 BTNL2 [+6538bp] All: C 103,235 14 T vs. A 0.283 (T) 0.1 (T) 0.87 (0.84-0.91) 0 (0-51) 1.35e-11
rs9268521 chr6:32381374 BTNL2 [+6469bp] All: C 103,235 14 C vs. G 0.275 (C) 0.1 (C) 0.87 (0.84-0.91) 0 (0-51) 1.36e-11
rs9268627 chr6:32405821 HLA-DRA [-1798bp] All: C 103,235 14 C vs. T 0.283 (C) 0.108 (C) 0.87 (0.84-0.91) 0 (0-51) 1.84e-11
rs9268614 chr6:32402778 HLA-DRA [-4841bp] All: C 103,235 14 G vs. T 0.283 (G) 0.117 (G) 0.87 (0.84-0.91) 0 (0-51) 1.95e-11
rs9268581 chr6:32396930 HLA-DRA [-10689bp] All: C 103,235 14 A vs. G 0.283 (A) 0.1 (A) 0.87 (0.84-0.91) 0 (0-52) 2.21e-11
rs3763311 chr6:32376176 BTNL2 [+1271bp] All: C 103,235 14 T vs. C 0.342 (T) 0.333 (T) 0.89 (0.86-0.92) 0 (-) 6.01e-11
rs9268499 chr6:32375695 BTNL2 [+790bp] All: C 103,235 14 A vs. G 0.342 (A) 0.492 (A) 0.89 (0.86-0.92) 0 (-) 7.66e-11
rs9268515 chr6:32379295 BTNL2 [+4390bp] All: C 103,235 14 C vs. G 0.267 (C) 0.05 (C) 0.87 (0.83-0.90) 2 (0-56) 1.03e-10
rs9268835 chr6:32428115 HLA-DRA [+15292bp] All: C 100,472 13 A vs. G 0.35 (A) 0.375 (A) 0.88 (0.85-0.92) 0 (0-16) 1.04e-10
rs3817963 chr6:32368087 BTNL2 All: C 103,235 14 C vs. T 0.342 (C) 0.283 (C) 0.89 (0.86-0.92) 0 (0-2) 1.30e-10
rs9268477 chr6:32359121 BTNL2 [-2619bp] All: C 103,235 14 A vs. G 0.342 (A) 0.15 (A) 0.89 (0.86-0.92) 0 (0-22) 1.53e-10
rs9268543 chr6:32384801 BTNL2 [+9896bp] All: C 103,235 14 T vs. A 0.258 (T) - 0.86 (0.82-0.90) 3 (0-56) 1.55e-10
rs9268833 chr6:32428062 HLA-DRA [+15239bp] All: C 100,472 13 T vs. C 0.35 (T) 0.375 (T) 0.88 (0.85-0.92) 0 (0-12) 1.64e-10
rs9268516 chr6:32379489 BTNL2 [+4584bp] All: C 103,235 14 T vs. C 0.342 (T) 0.133 (T) 0.89 (0.86-0.92) 0 (0-25) 1.75e-10
rs9268514 chr6:32378945 BTNL2 [+4040bp] All: C 103,235 14 A vs. T 0.325 (A) 0.125 (A) 0.89 (0.86-0.92) 0 (0-25) 2.05e-10
rs3763316 chr6:32376746 BTNL2 [+1841bp] All: C 103,235 14 T vs. C 0.342 (T) 0.133 (T) 0.89 (0.86-0.92) 0 (0-22) 2.08e-10
rs9268834 chr6:32428079 HLA-DRA [+15256bp] All: C 100,472 13 A vs. C 0.35 (A) 0.367 (A) 0.88 (0.85-0.92) 0 (0-23) 2.26e-10
rs9268475 chr6:32358231 BTNL2 [-3509bp] All: C 103,235 14 T vs. C 0.342 (T) 0.133 (T) 0.89 (0.86-0.92) 0 (0-20) 2.49e-10
rs9268491 chr6:32374131 BTNL2 All: C 103,235 14 G vs. C 0.35 (G) 0.133 (G) 0.89 (0.86-0.92) 0 (0-18) 2.52e-10
rs9268478 chr6:32360258 BTNL2 [-1482bp] All: C 103,235 14 G vs. A - - 1.12 (1.08-1.16) 0 (0-23) 2.57e-10
rs9268932 chr6:32433290 HLA-DRA [+20467bp] All: C 96,523 12 T vs. G 0.492 (T) 0.433 (G) 1.14 (1.09-1.19) 0 (0-43) 3.36e-09
rs9268947 chr6:32433741 HLA-DRA [+20918bp] All: C 96,523 12 G vs. A - 0.333 (A) 1.15 (1.10-1.21) 0 (0-42) 4.73e-09
rs9268937 chr6:32433399 HLA-DRA [+20576bp] All: C 96,523 12 G vs. A 0.458 (G) 0.483 (A) 0.88 (0.84-0.92) 0 (0-46) 5.18e-09
rs9268944 chr6:32433654 HLA-DRA [+20831bp] All: C 96,523 12 C vs. T 0.417 (C) - 0.87 (0.83-0.91) 0 (0-36) 1.16e-08
rs9268951 chr6:32433907 HLA-DRA [+21084bp] C - 10 A vs. G - - <1 (-) 0 (-) <5.00e-08
rs3135348 chr6:32394098 HLA-DRA [-13521bp] All: C 103,235 14 G vs. A - - 0.92 (0.89-0.95) 0 (0-48) 1.05e-07
rs2076523 chr6:32370835 BTNL2 All: C 103,235 14 C vs. T 0.392 (C) 0.467 (C) 0.91 (0.88-0.95) 0 (0-54) 1.16e-07
rs9268893 chr6:32431927 HLA-DRA [+19104bp] All: C 100,472 13 C vs. T 0.483 (C) 0.375 (C) 1.10 (1.06-1.14) 0 (0-47) 1.22e-07
rs4321864 chr6:32399187 HLA-DRA [-8432bp] All: C 103,235 14 A vs. C 0.342 (A) 0.383 (A) 0.91 (0.88-0.94) 0 (0-0) 1.71e-07
rs3806157 chr6:32373801 BTNL2 All: C 103,235 14 G vs. T 0.408 (G) 0.317 (G) 0.92 (0.89-0.95) 0 (0-52) 1.75e-07
rs3806156 chr6:32373698 BTNL2 All: C 103,235 14 T vs. G 0.408 (T) 0.467 (T) 0.92 (0.89-0.95) 0 (0-55) 2.07e-07
rs3135344 chr6:32395036 HLA-DRA [-12583bp] All: C 103,235 14 C vs. T 0.4 (C) 0.033 (C) 1.10 (1.06-1.13) 0 (0-36) 2.56e-07
rs3817973 chr6:32361111 BTNL2 [-629bp] All: C 103,235 14 C vs. T 0.492 (C) 0.333 (T) 1.09 (1.05-1.12) 51 (10-74) 3.55e-07
rs9268906 chr6:32432181 HLA-DRA [+19358bp] All: C 100,472 13 G vs. A 0.392 (G) 0.375 (G) 0.91 (0.88-0.95) 0 (0-22) 4.20e-07
rs2076533 chr6:32363527 BTNL2 All: C 103,235 14 C vs. T 0.492 (C) 0.333 (T) 1.09 (1.05-1.12) 50 (8-73) 4.37e-07
rs9268888 chr6:32431867 HLA-DRA [+19044bp] C - 11 T vs. G 0.458 (G) 0.383 (G) <1 (-) 0 (-) <1.00e-06
rs9268852 chr6:32429594 HLA-DRA [+16771bp] All: C 100,472 13 A vs. G 0.458 (A) 0.375 (A) 1.09 (1.06-1.13) 0 (0-39) 4.95e-07
rs9268877 chr6:32431147 HLA-DRA [+18324bp] All: C 100,472 13 A vs. G 0.467 (A) 0.367 (A) 1.09 (1.06-1.13) 0 (0-41) 4.95e-07
rs9268889 chr6:32431886 HLA-DRA [+19063bp] All: C 100,472 13 G vs. A 0.383 (G) 0.392 (G) 0.91 (0.88-0.95) 0 (0-24) 5.02e-07
rs9268849 chr6:32429327 HLA-DRA [+16504bp] All: C 103,235 14 T vs. C 0.4 (T) 0.367 (T) 0.91 (0.88-0.95) 0 (0-19) 5.06e-07
rs2395185 chr6:32433167 HLA-DRA [+20344bp] All: C 96,523 12 T vs. G 0.392 (T) 0.367 (T) 0.91 (0.88-0.95) 0 (0-43) 5.71e-07
rs9268923 chr6:32432835 HLA-DRA [+20012bp] All: C 100,472 13 T vs. C 0.392 (T) 0.367 (T) 0.91 (0.88-0.95) 0 (0-32) 5.92e-07
rs9268858 chr6:32429758 HLA-DRA [+16935bp] All: C 100,472 13 C vs. T 0.392 (C) 0.367 (C) 0.91 (0.88-0.95) 0 (0-30) 6.42e-07

Association studies for this region [+]