HLA-DRA, chr6:32407619-32412823 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region
Append your own data and create meta-analysis

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2395163 chr6:32387809 BTNL2 [+12904bp] All: C 103,235 14 C vs. T 0.283 (C) 0.1 (C) 0.87 (0.84-0.91) 0 (0-54) 5.00e-12
Meta_image?name=rs2395163

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs73729239 chr6:32427339 HLA-DRA [+14516bp] C - 4 A vs. C - - >1 (-) 0 (-) >0.05
rs117956179 chr6:32374135 BTNL2 C - 11 A vs. G - 0.142 (G) >1 (-) 14 (-) >0.05
rs9268913 chr6:32432520 HLA-DRA [+19697bp] C - 11 T vs. C 0.15 (T) 0.258 (T) <1 (-) 0 (-) >0.05
rs9268901 chr6:32432007 HLA-DRA [+19184bp] C - 11 T vs. G 0.15 (T) 0.258 (T) <1 (-) 0 (-) >0.05
rs9268894 chr6:32431954 HLA-DRA [+19131bp] C - 11 T vs. G 0.142 (G) 0.233 (G) >1 (-) 0 (-) >0.05
rs73399211 chr6:32432464 HLA-DRA [+19641bp] C - 3 T vs. G - - >1 (-) 0 (-) >0.05
rs143363223 chr6:32360140 BTNL2 [-1600bp] C - 10 A vs. G - - >1 (-) 9 (-) >0.05
rs7452863 chr6:32439068 HLA-DRA [+26245bp] C - 3 C vs. G 0.125 (C) 0.242 (C) <1 (-) 0 (-) >0.05
rs118046932 chr6:32374105 BTNL2 C - 11 T vs. C - 0.15 (C) >1 (-) 14 (-) >0.05
rs117052861 chr6:32373903 BTNL2 C - 11 T vs. C - 0.15 (C) >1 (-) 13 (-) >0.05
rs117346624 chr6:32373904 BTNL2 C - 11 A vs. G - 0.15 (A) <1 (-) 13 (-) >0.05
rs117618533 chr6:32373907 BTNL2 C - 11 A vs. T - 0.15 (T) >1 (-) 13 (-) >0.05
rs73395141 chr6:32424727 HLA-DRA [+11904bp] C - 11 T vs. C - - <1 (-) 1 (-) >0.05
rs28732207 chr6:32383458 BTNL2 [+8553bp] C - 12 A vs. G 0.042 (G) - <1 (-) 0 (-) >0.05
rs117252344 chr6:32373866 BTNL2 C - 11 T vs. C - 0.15 (T) <1 (-) 13 (-) >0.05
rs142491731 chr6:32360109 BTNL2 [-1631bp] C - 10 T vs. C - - >1 (-) 9 (-) >0.05
rs9469109 chr6:32393161 HLA-DRA [-14458bp] C - 12 A vs. T 0.083 (T) 0.358 (T) >1 (-) 0 (-) >0.05
rs117904727 chr6:32365406 BTNL2 C - 9 A vs. G - 0.142 (A) >1 (-) 0 (-) >0.05
rs117660964 chr6:32385948 BTNL2 [+11043bp] C - 3 A vs. G - 0.05 (G) >1 (-) 0 (-) >0.05
rs28732211 chr6:32398616 HLA-DRA [-9003bp] C - 12 A vs. T 0.05 (A) - >1 (-) 0 (-) >0.05
rs9268919 chr6:32432598 HLA-DRA [+19775bp] C - 11 T vs. C 0.15 (C) 0.242 (C) >1 (-) 0 (-) >0.05
rs3135363 chr6:32389648 BTNL2 [+14743bp] C - 11 A vs. G 0.183 (G) 0.275 (G) >1 (-) 0 (-) >0.05
rs28732210 chr6:32398497 HLA-DRA [-9122bp] C - 12 T vs. C 0.05 (T) - >1 (-) 0 (-) >0.05
rs28732212 chr6:32402531 HLA-DRA [-5088bp] C - 12 A vs. G 0.042 (A) - >1 (-) 0 (-) >0.05
rs118010815 chr6:32373774 BTNL2 C - 11 A vs. G - 0.15 (A) <1 (-) 13 (-) >0.05
rs28732213 chr6:32403119 HLA-DRA [-4500bp] C - 12 A vs. G 0.05 (A) - >1 (-) 0 (-) >0.05
rs117130854 chr6:32358432 BTNL2 [-3308bp] C - 10 A vs. G - 0.15 (A) <1 (-) 2 (-) >0.05
rs3129950 chr6:32358201 BTNL2 [-3539bp] C - 12 C vs. G 0.1 (C) - <1 (-) 0 (-) >0.05
rs7763411 chr6:32424992 HLA-DRA [+12169bp] C - 11 T vs. C 0.083 (T) - <1 (-) 2 (-) >0.05
rs117590326 chr6:32365093 BTNL2 C - 9 A vs. T - 0.15 (A) <1 (-) 0 (-) >0.05
rs9296027 chr6:32393062 HLA-DRA [-14557bp] C - 12 C vs. G 0.083 (G) 0.342 (G) >1 (-) 0 (-) >0.05
rs115303880 chr6:32358459 BTNL2 [-3281bp] C - 10 T vs. G 0.167 (T) 0.192 (T) <1 (-) 2 (-) >0.05
rs117510940 chr6:32365491 BTNL2 C - 9 T vs. C - 0.15 (T) >1 (-) 0 (-) >0.05
rs73404904 chr6:32395507 HLA-DRA [-12112bp] C - 12 C vs. G - - <1 (-) 0 (-) >0.05
rs117882890 chr6:32363558 BTNL2 C - 9 A vs. T - 0.15 (T) <1 (-) 0 (-) >0.05
rs73400843 chr6:32371500 BTNL2 C - 11 A vs. G 0.025 (A) 0.017 (A) <1 (-) 0 (-) >0.05
rs117802793 chr6:32365503 BTNL2 C - 9 T vs. C - 0.142 (C) <1 (-) 0 (-) >0.05
rs3129966 chr6:32381280 BTNL2 [+6375bp] C - 12 C vs. G 0.092 (C) - <1 (-) 4 (-) >0.05
rs117217900 chr6:32365532 BTNL2 C - 9 C vs. G - 0.15 (C) >1 (-) 0 (-) >0.05
rs117099966 chr6:32365791 BTNL2 C - 9 A vs. G - 0.15 (G) <1 (-) 0 (-) >0.05
rs117623763 chr6:32368016 BTNL2 C - 11 A vs. G - 0.15 (A) >1 (-) 9 (-) >0.05
rs116963671 chr6:32367971 BTNL2 C - 11 A vs. G - 0.142 (A) >1 (-) 9 (-) >0.05
rs73407174 chr6:32406224 HLA-DRA [-1395bp] C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs117709429 chr6:32365785 BTNL2 C - 9 T vs. C - 0.15 (T) >1 (-) 0 (-) >0.05
rs113273903 chr6:32406316 HLA-DRA [-1303bp] C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs28732214 chr6:32406122 HLA-DRA [-1497bp] C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs3129956 chr6:32368462 BTNL2 C - 12 A vs. G - - <1 (-) 2 (-) >0.05
rs115911147 chr6:32398170 HLA-DRA [-9449bp] C - 8 T vs. C 0.008 (T) - <1 (-) 0 (-) >0.05
rs118023064 chr6:32365752 BTNL2 C - 9 A vs. G - 0.15 (G) <1 (-) 0 (-) >0.05
rs2395187 chr6:32433197 HLA-DRA [+20374bp] C - 10 C vs. G 0.133 (G) 0.258 (G) <1 (-) 0 (-) >0.05

Association studies for this region [+]