HLA-DRA, chr6:32407619-32412823 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2395163 chr6:32387809 BTNL2 [+12904bp] All: C 103,235 14 C vs. T 0.283 (C) 0.1 (C) 0.87 (0.84-0.91) 0 (0-54) 5.00e-12
Meta_image?name=rs2395163

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs4959028 chr6:32383138 BTNL2 [+8233bp] C - 12 A vs. G 0.025 (G) 0.175 (G) <1 (-) 0 (-) <0.05
rs9268671 chr6:32414290 HLA-DRA [+1467bp] C - 12 A vs. G 0.325 (A) 0.25 (A) >1 (-) 36 (-) <0.05
rs3129860 chr6:32401079 HLA-DRA [-6540bp] C - 12 A vs. G 0.2 (A) 0.142 (A) >1 (-) 60 (-) <0.05
rs9268783 chr6:32420715 HLA-DRA [+7892bp] C - 12 T vs. C 0.375 (T) 0.425 (T) >1 (-) 28 (-) <0.05
rs9268644 chr6:32408044 HLA-DRA C - 12 A vs. C 0.467 (A) 0.158 (A) >1 (-) 0 (-) <0.05
rs9268847 chr6:32429277 HLA-DRA [+16454bp] C - 11 A vs. G - - <1 (-) 0 (-) <0.05
rs28362679 chr6:32363893 BTNL2 C - 12 A vs. G - - >1 (-) 9 (-) <0.05
rs17202717 chr6:32397863 HLA-DRA [-9756bp] C - 12 T vs. G 0.142 (T) - >1 (-) 60 (-) <0.05
rs34330585 chr6:32390703 BTNL2 [+15798bp] C - 12 C vs. G 0.142 (C) 0.033 (C) >1 (-) 60 (-) <0.05
rs34989128 chr6:32391772 HLA-DRA [-15847bp] C - 12 A vs. G 0.142 (A) 0.033 (A) >1 (-) 60 (-) <0.05
rs35875335 chr6:32391991 HLA-DRA [-15628bp] C - 12 T vs. C 0.142 (C) 0.033 (C) <1 (-) 60 (-) <0.05
rs35817460 chr6:32394122 HLA-DRA [-13497bp] C - 12 T vs. G - - >1 (-) 60 (-) <0.05
rs16822616 chr6:32410083 HLA-DRA C - 12 A vs. C 0.142 (A) 0.033 (A) >1 (-) 63 (-) <0.05
rs17496549 chr6:32409708 HLA-DRA C - 12 T vs. C 0.142 (T) 0.033 (T) >1 (-) 62 (-) <0.05
rs17496307 chr6:32401036 HLA-DRA [-6583bp] C - 12 A vs. T 0.142 (T) 0.033 (T) <1 (-) 60 (-) <0.05
rs12661254 chr6:32362173 BTNL2 C - 12 A vs. G 0.008 (G) - <1 (-) 9 (-) <0.05
rs2076534 chr6:32362416 BTNL2 C - 12 T vs. G 0.275 (T) 0.242 (T) >1 (-) 58 (-) <0.05
rs3817961 chr6:32368459 BTNL2 C - 12 A vs. G - - >1 (-) 52 (-) <0.05
rs9268779 chr6:32420397 HLA-DRA [+7574bp] C - 12 T vs. C 0.342 (T) 0.258 (T) >1 (-) 11 (-) <0.05
rs9268791 chr6:32421073 HLA-DRA [+8250bp] C - 12 T vs. C - - >1 (-) 6 (-) <0.05
rs7775108 chr6:32420238 HLA-DRA [+7415bp] C - 12 T vs. C - - >1 (-) 36 (-) <0.05
rs112748105 chr6:32368483 BTNL2 C - 12 A vs. G - - >1 (-) 53 (-) <0.05
rs112970137 chr6:32371717 BTNL2 C - 12 A vs. G 0.058 (G) 0.158 (G) <1 (-) 0 (-) <0.05
rs2395178 chr6:32405362 HLA-DRA [-2257bp] C - 12 C vs. G 0.333 (G) 0.317 (G) <1 (-) 58 (-) <0.05
rs6926737 chr6:32375745 BTNL2 [+840bp] C - 12 A vs. G 0.433 (G) 0.308 (G) <1 (-) 57 (-) <0.05
rs2395173 chr6:32404859 HLA-DRA [-2760bp] C - 12 A vs. G 0.342 (A) 0.317 (A) >1 (-) 57 (-) <0.05
rs3763314 chr6:32376618 BTNL2 [+1713bp] C - 12 T vs. C 0.45 (C) 0.333 (C) <1 (-) 57 (-) <0.05
rs3135397 chr6:32403941 HLA-DRA [-3678bp] C - 12 A vs. T 0.342 (A) 0.317 (A) >1 (-) 57 (-) <0.05
rs9268686 chr6:32415522 HLA-DRA [+2699bp] C - 12 T vs. C 0.342 (C) 0.425 (C) <1 (-) 40 (-) <0.05
rs6932542 chr6:32380262 BTNL2 [+5357bp] C - 12 A vs. G 0.433 (A) 0.317 (A) >1 (-) 57 (-) <0.05
rs984778 chr6:32400088 HLA-DRA [-7531bp] C - 12 T vs. C 0.333 (C) 0.317 (C) <1 (-) 57 (-) <0.05
rs6911383 chr6:32379682 BTNL2 [+4777bp] C - 12 T vs. C 0.433 (T) 0.317 (T) >1 (-) 57 (-) <0.05
rs9268501 chr6:32376882 BTNL2 [+1977bp] C - 12 T vs. G 0.433 (T) 0.317 (T) >1 (-) 56 (-) <0.05
rs9268502 chr6:32376932 BTNL2 [+2027bp] C - 12 T vs. C 0.433 (C) 0.317 (C) <1 (-) 56 (-) <0.05
rs9268503 chr6:32377061 BTNL2 [+2156bp] C - 12 T vs. C 0.433 (C) 0.317 (C) <1 (-) 56 (-) <0.05
rs9268507 chr6:32377539 BTNL2 [+2634bp] C - 12 A vs. G 0.433 (A) 0.317 (A) >1 (-) 57 (-) <0.05
rs28895026 chr6:32391695 HLA-DRA [-15924bp] C - 12 T vs. C 0.175 (C) 0.033 (C) <1 (-) 35 (-) <0.05
rs6932810 chr6:32380190 BTNL2 [+5285bp] C - 12 A vs. G 0.433 (G) 0.317 (G) <1 (-) 57 (-) <0.05
rs5007259 chr6:32379101 BTNL2 [+4196bp] C - 12 T vs. C 0.433 (T) 0.317 (T) >1 (-) 57 (-) <0.05
rs6906730 chr6:32379445 BTNL2 [+4540bp] C - 12 T vs. C 0.433 (T) 0.317 (T) >1 (-) 57 (-) <0.05
rs9268506 chr6:32377470 BTNL2 [+2565bp] C - 12 T vs. C 0.433 (C) 0.317 (C) <1 (-) 57 (-) <0.05
rs9268513 chr6:32378787 BTNL2 [+3882bp] C - 12 T vs. C 0.433 (T) 0.325 (T) >1 (-) 57 (-) <0.05
rs5007266 chr6:32378834 BTNL2 [+3929bp] C - 12 T vs. C 0.433 (T) 0.325 (T) >1 (-) 57 (-) <0.05
rs9268520 chr6:32380860 BTNL2 [+5955bp] C - 12 A vs. C 0.433 (C) 0.325 (C) <1 (-) 57 (-) <0.05
rs3135335 chr6:32401845 HLA-DRA [-5774bp] C - 12 C vs. G 0.333 (C) 0.317 (C) >1 (-) 56 (-) <0.05
rs4502931 chr6:32380782 BTNL2 [+5877bp] C - 12 A vs. T 0.442 (T) 0.325 (T) <1 (-) 57 (-) <0.05
rs5007258 chr6:32379239 BTNL2 [+4334bp] C - 12 A vs. G 0.433 (A) 0.325 (A) >1 (-) 57 (-) <0.05
rs6938337 chr6:32381041 BTNL2 [+6136bp] C - 12 C vs. G 0.442 (C) 0.325 (C) >1 (-) 57 (-) <0.05
rs968154 chr6:32380785 BTNL2 [+5880bp] C - 12 A vs. G 0.433 (G) 0.325 (G) <1 (-) 57 (-) <0.05
rs9268518 chr6:32380818 BTNL2 [+5913bp] C - 12 A vs. G 0.433 (A) 0.325 (A) >1 (-) 57 (-) <0.05

Association studies for this region [+]