HLA-DRB1, chr6:32546546-32557625 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs504594 - HLA-DRB1 All: C 104,595 13 C vs. A - - 1.24 (1.17-1.32) 36 (0-67) 5.73e-13
Meta_image?name=rs504594

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9271405 chr6:32587584 HLA-DQA1 [-8372bp] C - 4 T vs. C 0.117 (C) 0.217 (C) >1 (-) 0 (-) >0.05
rs9271325 chr6:32582513 HLA-DQA1 [-13443bp] C - 4 C vs. G 0.35 (G) 0.408 (G) <1 (-) 10 (-) >0.05
rs13208475 chr6:32583255 HLA-DQA1 [-12701bp] C - 4 T vs. C 0.167 (T) 0.142 (T) >1 (-) 0 (-) >0.05
rs13208697 chr6:32583274 HLA-DQA1 [-12682bp] C - 4 T vs. G 0.158 (T) 0.133 (T) >1 (-) 0 (-) >0.05
rs9272070 chr6:32599485 HLA-DQA1 C - 3 T vs. G 0.408 (G) 0.45 (G) >1 (-) 0 (-) >0.05
rs9271407 chr6:32587605 HLA-DQA1 [-8351bp] C - 4 T vs. C 0.125 (T) 0.217 (T) <1 (-) 0 (-) >0.05
rs9271410 chr6:32587645 HLA-DQA1 [-8311bp] C - 4 A vs. G 0.133 (G) 0.217 (G) >1 (-) 0 (-) >0.05
rs9271412 chr6:32587685 HLA-DQA1 [-8271bp] C - 4 T vs. C 0.133 (T) 0.217 (T) <1 (-) 0 (-) >0.05
rs9271417 chr6:32587818 HLA-DQA1 [-8138bp] C - 4 T vs. C 0.125 (C) 0.217 (C) >1 (-) 0 (-) >0.05
rs17840121 chr6:32577693 HLA-DQA1 [-18263bp] C - 8 C vs. G 0.133 (C) 0.033 (C) <1 (-) 0 (-) >0.05
rs13206219 chr6:32577847 HLA-DQA1 [-18109bp] C - 8 T vs. G 0.117 (T) - <1 (-) 0 (-) >0.05
rs9271424 chr6:32587922 HLA-DQA1 [-8034bp] C - 4 T vs. C 0.125 (C) 0.208 (C) >1 (-) 0 (-) >0.05
rs3104364 chr6:32603968 HLA-DQA1 C - 3 A vs. G 0.458 (A) 0.425 (A) >1 (-) 17 (-) >0.05
rs2647092 chr6:32584440 HLA-DQA1 [-11516bp] C - 4 T vs. C 0.117 (T) 0.242 (T) >1 (-) 0 (-) >0.05
rs13206639 chr6:32578100 HLA-DQA1 [-17856bp] C - 8 A vs. G 0.125 (A) 0.033 (A) <1 (-) 0 (-) >0.05
rs562462 chr6:32586437 HLA-DQA1 [-9519bp] C - 4 T vs. C - - <1 (-) 0 (-) >0.05
rs9271425 chr6:32587923 HLA-DQA1 [-8033bp] C - 4 A vs. G 0.125 (G) 0.208 (G) >1 (-) 0 (-) >0.05
rs9271437 chr6:32588166 HLA-DQA1 [-7790bp] C - 4 A vs. G 0.133 (A) 0.217 (A) <1 (-) 0 (-) >0.05
rs9272207 chr6:32601966 HLA-DQA1 C - 3 T vs. C 0.258 (C) - <1 (-) 48 (-) >0.05
rs2647063 chr6:32570439 HLA-DRB1 [+12814bp] C - 3 C vs. G 0.108 (C) - <1 (-) 0 (-) >0.05
rs9271439 chr6:32588234 HLA-DQA1 [-7722bp] C - 4 A vs. G 0.133 (G) - >1 (-) 0 (-) >0.05
rs9272105 chr6:32599999 HLA-DQA1 C - 4 A vs. G 0.408 (A) 0.475 (A) >1 (-) 0 (-) >0.05
rs9271300 chr6:32581582 HLA-DQA1 [-14374bp] C - 4 C vs. G 0.433 (G) 0.383 (G) >1 (-) 0 (-) >0.05
rs9272104 chr6:32599918 HLA-DQA1 C - 4 T vs. C 0.408 (C) 0.475 (C) <1 (-) 0 (-) >0.05
rs9271471 chr6:32588665 HLA-DQA1 [-7291bp] C - 4 C vs. G 0.133 (G) 0.225 (G) >1 (-) 0 (-) >0.05
rs9271462 chr6:32588501 HLA-DQA1 [-7455bp] C - 4 T vs. C 0.133 (C) - >1 (-) 0 (-) >0.05
rs9271460 chr6:32588463 HLA-DQA1 [-7493bp] C - 4 A vs. G 0.108 (A) - <1 (-) 0 (-) >0.05
rs9271484 chr6:32588905 HLA-DQA1 [-7051bp] C - 4 T vs. G 0.142 (T) 0.183 (T) <1 (-) 0 (-) >0.05
rs9271492 chr6:32589122 HLA-DQA1 [-6834bp] C - 4 A vs. C 0.217 (C) 0.342 (C) >1 (-) 0 (-) >0.05
rs9272179 chr6:32601451 HLA-DQA1 C - 3 T vs. C 0.317 (C) 0.45 (C) <1 (-) 31 (-) >0.05
rs9272180 chr6:32601461 HLA-DQA1 C - 3 T vs. C 0.325 (T) 0.45 (T) >1 (-) 31 (-) >0.05
rs9272186 chr6:32601635 HLA-DQA1 C - 3 T vs. C 0.333 (T) 0.433 (T) >1 (-) 36 (-) >0.05
rs116630455 chr6:32601946 HLA-DQA1 C - 4 T vs. C 0.158 (C) 0.2 (C) >1 (-) 72 (-) >0.05
rs28383272 chr6:32586207 HLA-DQA1 [-9749bp] C - 3 A vs. T 0.125 (A) - >1 (-) 0 (-) >0.05
rs28383273 chr6:32586221 HLA-DQA1 [-9735bp] C - 3 T vs. C 0.125 (T) - >1 (-) 0 (-) >0.05
rs28383274 chr6:32586246 HLA-DQA1 [-9710bp] C - 3 A vs. G 0.125 (G) 0.033 (G) <1 (-) 0 (-) >0.05
rs28383263 chr6:32585843 HLA-DQA1 [-10113bp] C - 4 T vs. C 0.133 (T) 0.033 (T) <1 (-) 0 (-) >0.05
rs9271379 chr6:32587333 HLA-DQA1 [-8623bp] C - 4 T vs. C - 0.233 (T) <1 (-) 0 (-) >0.05
rs607998 chr6:32587038 HLA-DQA1 [-8918bp] C - 4 A vs. G 0.117 (A) 0.092 (A) >1 (-) 0 (-) >0.05
rs9272185 chr6:32601620 HLA-DQA1 C - 3 A vs. G 0.333 (A) 0.45 (A) >1 (-) 38 (-) >0.05
rs9272254 chr6:32603098 HLA-DQA1 C - 3 T vs. C 0.408 (T) 0.433 (T) <1 (-) 55 (-) >0.05
rs28383265 chr6:32585924 HLA-DQA1 [-10032bp] C - 3 T vs. C 0.125 (T) 0.025 (T) >1 (-) 0 (-) >0.05
rs9272183 chr6:32601604 HLA-DQA1 C - 3 T vs. C 0.342 (T) 0.442 (T) >1 (-) 37 (-) >0.05
rs9272172 chr6:32601260 HLA-DQA1 C - 3 C vs. G 0.258 (C) 0.208 (C) >1 (-) 27 (-) >0.05
rs28383271 chr6:32586134 HLA-DQA1 [-9822bp] C - 4 T vs. C 0.125 (T) 0.033 (T) >1 (-) 0 (-) >0.05
rs9272170 chr6:32601243 HLA-DQA1 C - 3 C vs. G 0.283 (G) 0.375 (G) <1 (-) 32 (-) >0.05
rs28383257 chr6:32585680 HLA-DQA1 [-10276bp] C - 4 T vs. C 0.083 (T) 0.033 (T) >1 (-) 0 (-) >0.05
rs9272118 chr6:32600448 HLA-DQA1 C - 5 T vs. C 0.408 (T) 0.475 (T) >1 (-) 0 (-) >0.05
rs9272132 chr6:32600677 HLA-DQA1 C - 5 A vs. G 0.408 (G) 0.458 (G) <1 (-) 0 (-) >0.05
rs9272116 chr6:32600404 HLA-DQA1 C - 5 T vs. C 0.375 (C) 0.475 (C) <1 (-) 0 (-) >0.05

Association studies for this region [+]