IGF2BP3, chr7:23349828-23510086 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs199351 chr7:23300049 GPNMB All: C 108,990 15 C vs. A 0.392 (C) 0.425 (C) 0.89 (0.87-0.92) 9 (0-46) 9.25e-12
Meta_image?name=rs199351

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs199351 chr7:23300049 GPNMB All: C 108,990 15 C vs. A 0.392 (C) 0.425 (C) 0.89 (0.87-0.92) 9 (0-46) 9.25e-12
rs156429 chr7:23306020 GPNMB All: C 108,990 15 C vs. T 0.383 (C) 0.3 (C) 0.89 (0.87-0.92) 0 (0-46) 3.09e-11
rs10250602 chr7:23303701 GPNMB All: C 108,990 15 C vs. T 0.358 (C) 0.15 (C) 0.89 (0.86-0.92) 7 (0-57) 3.87e-11
rs156425 chr7:23309119 GPNMB All: C 108,990 15 C vs. T 0.392 (C) 0.417 (C) 0.90 (0.87-0.93) 0 (0-42) 6.13e-11
rs166663 chr7:23316742 GPNMB [+2015bp] All: C 108,990 15 C vs. A 0.392 (C) 0.292 (C) 0.90 (0.87-0.93) 0 (0-41) 1.69e-10
rs1728320 chr7:23319789 GPNMB [+5062bp] All: C 108,990 15 G vs. T 0.375 (G) 0.392 (G) 0.90 (0.87-0.93) 0 (0-40) 1.77e-10
rs28635122 chr7:23310181 GPNMB All: C 108,990 15 T vs. C 0.367 (T) 0.167 (T) 0.90 (0.87-0.93) 0 (0-50) 1.93e-10
rs2268747 chr7:23313462 GPNMB All: C 108,990 15 G vs. A 0.367 (G) 0.258 (G) 0.90 (0.87-0.93) 0 (0-50) 2.34e-10
rs156407 chr7:23315639 GPNMB [+912bp] All: C 108,990 15 A vs. G 0.392 (A) 0.4 (A) 0.90 (0.87-0.93) 0 (0-40) 2.44e-10
rs4282457 chr7:23322416 GPNMB [+7689bp] All: C 108,990 15 A vs. G - 0.342 (G) 1.11 (1.08-1.15) 0 (0-42) 2.51e-10
rs199654 chr7:23344218 MALSU1 All: C 108,990 15 G vs. A 0.317 (G) 0.15 (G) 0.89 (0.86-0.93) 0 (0-49) 8.88e-09
rs199651 chr7:23366691 IGF2BP3 All: C 108,990 15 T vs. A - - 1.10 (1.06-1.14) 0 (0-25) 1.41e-08
rs199652 chr7:23366145 IGF2BP3 All: C 108,990 15 A vs. G - - 1.10 (1.06-1.14) 0 (0-7) 2.14e-08
rs76983703 chr7:23376713 IGF2BP3 All: C 108,990 15 A vs. G 0.242 (A) 0.092 (A) 0.90 (0.87-0.94) 24 (0-59) 3.21e-08
rs149821 chr7:23339460 MALSU1 All: C 108,990 15 T vs. C 0.433 (T) 0.342 (T) 0.92 (0.89-0.95) 0 (0-9) 3.49e-07
rs156421 chr7:23312487 GPNMB C - 13 A vs. G 0.392 (G) 0.342 (G) >1 (-) 0 (-) <1.00e-06
rs10229956 chr7:23402936 IGF2BP3 C - 13 C vs. G 0.425 (C) 0.258 (C) <1 (-) 0 (-) <1.00e-06
rs466225 chr7:23332403 MALSU1 [-5955bp] C - 13 T vs. G 0.375 (T) 0.233 (T) <1 (-) 0 (-) <1.00e-04
rs433395 chr7:23401955 IGF2BP3 C - 13 T vs. G 0.392 (T) 0.283 (T) <1 (-) 0 (-) <1.00e-04
rs10224388 chr7:23316440 GPNMB [+1713bp] C - 13 A vs. G - - <1 (-) 0 (-) <1.00e-04
rs274054 chr7:23390467 IGF2BP3 C - 13 C vs. G 0.375 (C) 0.383 (C) <1 (-) 0 (-) <1.00e-04
rs7794684 chr7:23310805 GPNMB C - 13 A vs. G 0.367 (G) 0.283 (G) >1 (-) 6 (-) <1.00e-04
rs5850 chr7:23314547 GPNMB C - 13 T vs. C 0.367 (T) 0.158 (T) <1 (-) 6 (-) <1.00e-04
rs4265084 chr7:23407240 IGF2BP3 C - 13 C vs. G 0.367 (C) 0.125 (C) <1 (-) 0 (-) <1.00e-04
rs274058 chr7:23391509 IGF2BP3 C - 13 C vs. G 0.375 (G) 0.292 (G) >1 (-) 0 (-) <1.00e-04
rs2268745 chr7:23317600 GPNMB [+2873bp] C - 13 A vs. G 0.367 (A) 0.25 (A) <1 (-) 6 (-) <1.00e-04
rs199649 chr7:23369704 IGF2BP3 C - 13 C vs. G - - <1 (-) 0 (-) <1.00e-04
rs10255155 chr7:23402147 IGF2BP3 C - 13 A vs. T 0.392 (T) 0.25 (T) >1 (-) 0 (-) <1.00e-04
rs2268744 chr7:23332280 MALSU1 [-6078bp] C - 13 T vs. C 0.383 (T) 0.15 (T) <1 (-) 1 (-) <1.00e-04
rs7796541 chr7:23389073 IGF2BP3 C - 13 A vs. C 0.367 (A) 0.167 (A) <1 (-) 0 (-) <1.00e-04
rs1964536 chr7:23380185 IGF2BP3 All: C 108,990 15 C vs. T 0.458 (C) 0.25 (C) 0.93 (0.90-0.96) 0 (0-47) 4.80e-06
rs199657 chr7:23337507 MALSU1 [-851bp] C - 13 C vs. G 0.417 (G) 0.25 (G) >1 (-) 0 (-) <1.00e-04
rs199656 chr7:23337615 MALSU1 [-743bp] C - 13 T vs. G 0.417 (G) 0.25 (G) >1 (-) 0 (-) <1.00e-04
rs4428570 chr7:23361805 IGF2BP3 C - 13 T vs. G - - <1 (-) 0 (-) <1.00e-04
rs10233942 chr7:23373730 IGF2BP3 C - 13 A vs. G - - <1 (-) 0 (-) <1.00e-04
rs200717 chr7:23392271 IGF2BP3 C - 13 T vs. C 0.433 (C) 0.283 (C) >1 (-) 0 (-) <1.00e-04
rs466240 chr7:23338774 MALSU1 C - 13 T vs. C 0.417 (C) 0.283 (C) >1 (-) 0 (-) <1.00e-04
rs10279941 chr7:23370508 IGF2BP3 C - 13 C vs. G 0.358 (G) 0.183 (G) >1 (-) 0 (-) <1.00e-04
rs274032 chr7:23374559 IGF2BP3 C - 13 C vs. G 0.425 (G) 0.383 (G) >1 (-) 0 (-) <1.00e-04
rs199650 chr7:23367189 IGF2BP3 C - 13 T vs. C 0.433 (C) - >1 (-) 0 (-) <1.00e-04
rs3807459 chr7:23389751 IGF2BP3 C - 13 T vs. C 0.425 (C) 0.35 (C) >1 (-) 0 (-) <1.00e-04
rs111665084 chr7:23427720 IGF2BP3 All: C 108,990 15 C vs. T - - 1.11 (1.06-1.17) 0 (0-52) 3.71e-05
rs460031 chr7:23335308 MALSU1 [-3050bp] All: C 108,990 15 T vs. G 0.4 (T) 0.225 (T) 1.08 (1.04-1.11) 0 (0-48) 4.70e-05
rs199359 chr7:23338514 MALSU1 C - 13 T vs. C 0.425 (C) 0.15 (C) >1 (-) 0 (-) <1.00e-04
rs6461705 chr7:23360749 IGF2BP3 C - 13 T vs. C - - <1 (-) 0 (-) <1.00e-04
rs79980740 chr7:23430418 IGF2BP3 All: C 108,990 15 T vs. C 0.158 (T) 0.067 (T) 0.91 (0.86-0.95) 5 (0-56) 7.02e-05
rs377383 chr7:23435053 IGF2BP3 All: C 108,990 15 T vs. G 0.25 (T) 0.317 (G) 1.09 (1.04-1.13) 0 (0-30) 9.28e-05
rs449271 chr7:23416417 IGF2BP3 All: C 108,990 15 T vs. C 0.1 (T) 0.258 (T) 0.91 (0.87-0.95) 0 (0-43) 9.47e-05
rs6461708 chr7:23415317 IGF2BP3 All: C 108,990 15 A vs. C 0.1 (A) 0.258 (A) 0.91 (0.87-0.96) 0 (0-42) 1.10e-04
rs55633349 chr7:23317121 GPNMB [+2394bp] All: C 108,990 15 G vs. A 0.108 (G) - 0.90 (0.85-0.95) 38 (0-66) 1.49e-04

Association studies for this region [+]