ISYNA1, chr19:18545198-18549111 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2303693 chr19:18557673 ELL All: C 108,990 15 T vs. C 0.167 (T) 0.058 (T) 0.91 (0.86-0.95) 0 (0-31) 7.09e-05
Meta_image?name=rs2303693

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2303693 chr19:18557673 ELL All: C 108,990 15 T vs. C 0.167 (T) 0.058 (T) 0.91 (0.86-0.95) 0 (0-31) 7.09e-05
rs113465793 chr19:18556417 ELL All: C 108,990 15 C vs. A 0.183 (C) 0.042 (C) 0.91 (0.87-0.95) 0 (0-38) 7.76e-05
rs2303694 chr19:18562438 ELL All: C 108,990 15 T vs. C 0.183 (T) 0.058 (T) 0.91 (0.87-0.95) 0 (0-32) 1.08e-04
rs79888481 chr19:18569957 ELL All: C 108,990 15 A vs. G 0.183 (A) 0.058 (A) 0.91 (0.87-0.96) 0 (0-31) 1.20e-04
rs111615037 chr19:18569910 ELL C - 12 A vs. G - - >1 (-) 34 (-) <0.05
rs146804507 chr19:18524170 SSBP4 [-5504bp] C - 3 A vs. G - - >1 (-) 0 (-) <0.05
rs112583951 chr19:18592124 ELL C - 12 A vs. G - - >1 (-) 33 (-) <0.05
rs78230247 chr19:18550121 ISYNA1 [+1010bp] C - 12 A vs. G - - >1 (-) 33 (-) <0.05
rs112125416 chr19:18560563 ELL C - 12 A vs. G 0.025 (A) - >1 (-) 26 (-) <0.05
rs76668818 chr19:18583243 ELL C - 10 T vs. C 0.05 (C) - >1 (-) 8 (-) <0.05
rs79341273 chr19:18558517 ELL C - 10 A vs. G 0.05 (A) - <1 (-) 0 (-) <0.05
rs10424080 chr19:18518778 LRRC25 [+10351bp] C - 13 T vs. C 0.242 (T) 0.117 (T) >1 (-) 8 (-) <0.05
rs78612005 chr19:18554561 ELL C - 10 C vs. G 0.042 (G) - >1 (-) 4 (-) <0.05
rs74701207 chr19:18551039 ISYNA1 [+1928bp] C - 13 T vs. C 0.2 (C) 0.058 (C) >1 (-) 0 (-) <0.05
rs117419635 chr19:18535494 SSBP4 C - 10 A vs. G 0.033 (G) - >1 (-) 0 (-) <0.05
rs111682204 chr19:18574235 ELL C - 13 T vs. C - - >1 (-) 0 (-) <0.05
rs8103520 chr19:18563970 ELL C - 13 A vs. C 0.183 (C) 0.058 (C) >1 (-) 0 (-) <0.05
rs79257623 chr19:18563714 ELL C - 13 A vs. G 0.183 (A) 0.058 (A) <1 (-) 0 (-) <0.05
rs76184771 chr19:18567189 ELL C - 13 A vs. G 0.192 (G) 0.058 (G) >1 (-) 0 (-) <0.05
rs3746176 chr19:18568951 ELL C - 13 C vs. G 0.183 (G) 0.033 (G) >1 (-) 0 (-) <0.05
rs79341622 chr19:18598213 ELL C - 13 T vs. C 0.175 (C) 0.067 (C) >1 (-) 0 (-) <0.05
rs75445489 chr19:18571150 ELL C - 13 A vs. G 0.175 (A) 0.058 (A) <1 (-) 0 (-) <0.05
rs74497531 chr19:18578178 ELL C - 13 A vs. G 0.183 (A) 0.05 (A) <1 (-) 0 (-) <0.05
rs75245298 chr19:18581227 ELL C - 13 T vs. C 0.183 (C) 0.042 (C) >1 (-) 0 (-) <0.05
rs78855479 chr19:18581916 ELL C - 13 T vs. C 0.183 (T) 0.058 (T) <1 (-) 0 (-) <0.05
rs77571703 chr19:18578984 ELL C - 13 T vs. C 0.183 (T) 0.058 (T) <1 (-) 0 (-) <0.05
rs13344313 chr19:18517767 LRRC25 [+9340bp] C - 13 A vs. G 0.242 (A) 0.1 (A) >1 (-) 14 (-) <0.05
rs12971295 chr19:18517331 LRRC25 [+8904bp] C - 13 A vs. G - - >1 (-) 14 (-) <0.05
rs9749546 chr19:18518216 LRRC25 [+9789bp] C - 13 A vs. C 0.242 (C) 0.117 (C) <1 (-) 15 (-) <0.05
rs78061871 chr19:18566637 ELL C - 13 A vs. G 0.183 (A) - <1 (-) 0 (-) <0.05
rs75681761 chr19:18585329 ELL C - 13 A vs. G 0.183 (A) 0.05 (A) <1 (-) 0 (-) <0.05
rs117410880 chr19:18587332 ELL C - 10 C vs. G 0.017 (C) - <1 (-) 0 (-) <0.05
rs117956919 chr19:18572355 ELL C - 12 T vs. C 0.033 (T) - >1 (-) 0 (-) <0.05
rs10421074 chr19:18516210 LRRC25 [+7783bp] C - 13 T vs. C 0.233 (T) 0.117 (T) >1 (-) 12 (-) <0.05
rs76517609 chr19:18545411 ISYNA1 C - 5 A vs. T - - >1 (-) 15 (-) >0.05
rs8107222 chr19:18595089 ELL C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs148184174 chr19:18569434 ELL C - 4 A vs. G - - <1 (-) 10 (-) >0.05
rs147838337 chr19:18542996 SSBP4 C - 4 A vs. G - - >1 (-) 12 (-) >0.05
rs79557920 chr19:18528362 SSBP4 [-1312bp] C - 13 A vs. G 0.183 (A) - <1 (-) 0 (-) >0.05
rs75581575 chr19:18528247 SSBP4 [-1427bp] C - 13 A vs. C 0.183 (C) - >1 (-) 0 (-) >0.05
rs77488050 chr19:18525298 SSBP4 [-4376bp] C - 13 T vs. C 0.192 (C) 0.058 (C) >1 (-) 0 (-) >0.05
rs8102195 chr19:18527110 SSBP4 [-2564bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs2007981 chr19:18567555 ELL C - 13 A vs. C 0.375 (A) 0.183 (A) <1 (-) 0 (-) >0.05
rs79355165 chr19:18522031 SSBP4 [-7643bp] C - 13 A vs. G 0.192 (G) 0.075 (G) >1 (-) 0 (-) >0.05
rs111408331 chr19:18514714 LRRC25 [+6287bp] C - 10 A vs. G 0.017 (A) - >1 (-) 12 (-) >0.05
rs34666550 chr19:18502861 LRRC25 C - 11 T vs. C 0.033 (T) - >1 (-) 55 (-) >0.05
rs116875009 chr19:18550559 ISYNA1 [+1448bp] C - 12 T vs. C 0.017 (T) - >1 (-) 0 (-) >0.05
chr19:18587032 chr19:18587032 ELL C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs79007747 chr19:18587862 ELL C - 12 A vs. G - 0.017 (A) <1 (-) 0 (-) >0.05
rs4808800 chr19:18517958 LRRC25 [+9531bp] C - 12 A vs. G 0.35 (G) 0.117 (G) <1 (-) 28 (-) >0.05

Association studies for this region [+]