JSRP1, chr19:2252251-2269758 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs117022814 chr19:2209647 DOT1L All: C 96,015 12 T vs. C 0.033 (T) - 1.32 (1.18-1.48) 28 (0-64) 2.00e-06
Meta_image?name=rs117022814

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs117022814 chr19:2209647 DOT1L All: C 96,015 12 T vs. C 0.033 (T) - 1.32 (1.18-1.48) 28 (0-64) 2.00e-06
rs2159026 chr19:2318969 LSM7 [-2547bp] All: C 103,235 14 G vs. A 0.2 (G) 0.442 (G) 1.09 (1.04-1.14) 44 (0-70) 9.35e-05
rs4807228 chr19:2319273 LSM7 [-2243bp] All: C 103,235 14 T vs. C 0.258 (T) 0.317 (C) 1.07 (1.03-1.11) 47 (2-72) 2.09e-04
rs62119714 chr19:2309376 LINGO3 [+1220bp] C - 8 T vs. C 0.033 (T) - >1 (-) 49 (-) <0.05
chr19:2203555 chr19:2203555 DOT1L C - 9 T vs. G - - >1 (-) 22 (-) <0.05
rs145731586 chr19:2203551 DOT1L C - 9 T vs. C - - >1 (-) 22 (-) <0.05
rs28645435 chr19:2317988 LSM7 [-3528bp] C - 11 T vs. C 0.05 (T) 0.442 (T) >1 (-) 43 (-) <0.05
rs7255529 chr19:2305592 LINGO3 C - 11 A vs. G 0.408 (A) 0.408 (G) >1 (-) 35 (-) <0.05
rs8113393 chr19:2315553 LSM7 [-5963bp] C - 11 T vs. C 0.058 (T) 0.392 (T) >1 (-) 42 (-) <0.05
rs8112783 chr19:2315740 LSM7 [-5776bp] C - 11 T vs. G 0.058 (T) 0.392 (T) >1 (-) 40 (-) <0.05
rs4807225 chr19:2315387 LSM7 [-6129bp] C - 11 T vs. C 0.058 (T) 0.4 (T) >1 (-) 40 (-) <0.05
rs74974755 chr19:2207701 DOT1L C - 5 A vs. T 0.025 (T) - <1 (-) 0 (-) <0.05
rs28435559 chr19:2316418 LSM7 [-5098bp] C - 11 A vs. G 0.058 (A) 0.4 (A) >1 (-) 39 (-) <0.05
rs4807224 chr19:2315236 LSM7 [-6280bp] C - 11 C vs. G 0.058 (C) 0.4 (C) >1 (-) 40 (-) <0.05
rs73516526 chr19:2221430 DOT1L C - 11 T vs. G 0.025 (T) 0.242 (T) <1 (-) 17 (-) <0.05
rs2865074 chr19:2255819 JSRP1 C - 10 T vs. C 0.183 (T) 0.083 (T) >1 (-) 0 (-) <0.05
rs886363 chr19:2255336 JSRP1 C - 10 A vs. G 0.192 (A) 0.067 (A) >1 (-) 0 (-) <0.05
rs740404 chr19:2232049 DOT1L C - 11 A vs. G 0.1 (A) 0.2 (A) <1 (-) 0 (-) <0.05
rs7258448 chr19:2257230 JSRP1 C - 10 C vs. G 0.225 (G) 0.092 (G) <1 (-) 0 (-) <0.05
rs2523170 chr19:2268499 JSRP1 C - 11 A vs. T 0.242 (A) 0.1 (A) >1 (-) 0 (-) <0.05
rs10409081 chr19:2257514 JSRP1 C - 11 T vs. C 0.192 (T) 0.075 (T) >1 (-) 0 (-) <0.05
rs58070120 chr19:2264497 JSRP1 C - 11 T vs. C 0.3 (T) 0.308 (C) >1 (-) 0 (-) <0.05
rs11672897 chr19:2214242 DOT1L C - 11 A vs. G 0.092 (A) - <1 (-) 0 (-) <0.05
rs2523168 chr19:2266821 JSRP1 C - 11 C vs. G 0.208 (G) 0.1 (G) <1 (-) 0 (-) <0.05
rs3746159 chr19:2210269 DOT1L C - 12 T vs. C 0.125 (T) 0.175 (T) <1 (-) 0 (-) >0.05
rs2523177 chr19:2274578 C19orf35 [-53bp] C - 11 T vs. C 0.217 (T) 0.133 (T) >1 (-) 0 (-) >0.05
rs117849041 chr19:2312903 LINGO3 [+4747bp] C - 10 T vs. C 0.092 (T) - >1 (-) 31 (-) >0.05
rs8108923 chr19:2305651 LINGO3 C - 11 T vs. C 0.333 (T) 0.2 (T) >1 (-) 35 (-) >0.05
rs2865077 chr19:2261021 JSRP1 C - 11 A vs. T - - <1 (-) 0 (-) >0.05
rs8113619 chr19:2263458 JSRP1 C - 11 A vs. T - - <1 (-) 0 (-) >0.05
rs2523169 chr19:2267939 JSRP1 C - 11 A vs. G 0.267 (A) 0.1 (A) >1 (-) 0 (-) >0.05
rs2523175 chr19:2271323 OAZ1 C - 11 A vs. G 0.217 (A) 0.125 (A) >1 (-) 0 (-) >0.05
rs2523174 chr19:2271181 OAZ1 C - 11 T vs. C 0.217 (T) 0.133 (T) >1 (-) 0 (-) >0.05
rs62119668 chr19:2267526 JSRP1 C - 11 A vs. G - - <1 (-) 0 (-) >0.05
rs12974520 chr19:2262505 JSRP1 C - 11 A vs. T - - >1 (-) 0 (-) >0.05
rs2074457 chr19:2271282 OAZ1 C - 11 T vs. C 0.233 (T) 0.117 (T) >1 (-) 0 (-) >0.05
rs10409063 chr19:2276710 C19orf35 C - 11 T vs. C 0.217 (T) 0.125 (T) >1 (-) 0 (-) >0.05
rs62119711 chr19:2296903 LINGO3 C - 11 T vs. C - - >1 (-) 0 (-) >0.05
rs113640510 chr19:2221035 DOT1L C - 11 A vs. G - - >1 (-) 20 (-) >0.05
rs55855802 chr19:2265531 JSRP1 C - 11 T vs. C 0.333 (C) 0.4 (T) <1 (-) 0 (-) >0.05
rs2523173 chr19:2270634 OAZ1 C - 11 T vs. C 0.325 (C) 0.358 (T) <1 (-) 0 (-) >0.05
rs2074458 chr19:2271741 OAZ1 C - 11 A vs. G 0.342 (G) 0.342 (A) <1 (-) 0 (-) >0.05
rs12985777 chr19:2268055 JSRP1 C - 11 T vs. C 0.258 (T) 0.1 (T) >1 (-) 7 (-) >0.05
rs62119704 chr19:2267563 JSRP1 C - 11 T vs. C - - <1 (-) 0 (-) >0.05
rs28718565 chr19:2316597 LSM7 [-4919bp] C - 12 T vs. C 0.233 (C) 0.325 (T) <1 (-) 34 (-) >0.05
rs2250625 chr19:2270099 OAZ1 C - 11 T vs. C 0.342 (C) 0.333 (T) <1 (-) 0 (-) >0.05
rs8109162 chr19:2309034 LINGO3 [+878bp] C - 11 A vs. G 0.075 (A) 0.383 (A) >1 (-) 47 (-) >0.05
rs7253263 chr19:2317060 LSM7 [-4456bp] C - 12 A vs. G - - <1 (-) 45 (-) >0.05
rs4807227 chr19:2318180 LSM7 [-3336bp] C - 12 T vs. C 0.275 (C) 0.325 (T) <1 (-) 45 (-) >0.05
rs730417 chr19:2317666 LSM7 [-3850bp] C - 12 T vs. C 0.275 (C) 0.325 (T) <1 (-) 45 (-) >0.05

Association studies for this region [+]