LAMP3, chr3:182840001-182881627 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs11711441 chr3:182821275 MCCC1 All: C 108,990 15 A vs. G 0.2 (A) 0.25 (A) 0.83 (0.79-0.87) 0 (0-53) 2.54e-14
Meta_image?name=rs11711441

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs11711441 chr3:182821275 MCCC1 All: C 108,990 15 A vs. G 0.2 (A) 0.25 (A) 0.83 (0.79-0.87) 0 (0-53) 2.54e-14
rs147354256 chr3:182819548 MCCC1 All: C 108,990 15 T vs. C - - 1.20 (1.15-1.26) 1 (0-54) 2.89e-14
rs3772722 chr3:182811490 MCCC1 All: C 108,990 15 C vs. G 0.2 (C) 0.258 (C) 0.83 (0.80-0.87) 8 (0-45) 3.31e-14
rs73178990 chr3:182822362 MCCC1 All: C 108,990 15 C vs. T 0.2 (C) 0.242 (C) 0.83 (0.79-0.87) 0 (0-54) 3.64e-14
rs111716486 chr3:182809594 MCCC1 All: C 108,990 15 G vs. A 0.225 (G) 0.25 (G) 0.83 (0.79-0.87) 0 (0-52) 7.09e-14
rs11716229 chr3:182805943 MCCC1 All: C 108,990 15 C vs. G 0.192 (C) 0.392 (C) 0.84 (0.80-0.88) 1 (0-54) 9.36e-14
rs73178993 chr3:182830265 MCCC1 All: C 108,990 15 G vs. C 0.2 (G) 0.258 (G) 0.84 (0.80-0.88) 0 (0-52) 9.58e-14
rs9823766 chr3:182794516 MCCC1 All: C 108,990 15 C vs. T 0.192 (C) 0.392 (C) 0.84 (0.80-0.88) 0 (0-51) 9.60e-14
rs16833689 chr3:182803656 MCCC1 All: C 108,990 15 T vs. C 0.192 (T) 0.4 (T) 0.84 (0.80-0.88) 5 (0-56) 1.40e-13
rs9822789 chr3:182802874 MCCC1 All: C 108,990 15 T vs. G 0.192 (T) 0.392 (T) 0.84 (0.80-0.88) 5 (0-56) 1.49e-13
rs12638619 chr3:182799242 MCCC1 All: C 108,990 15 T vs. C 0.192 (T) 0.392 (T) 0.84 (0.80-0.88) 5 (0-56) 1.89e-13
rs11716740 chr3:182831688 MCCC1 All: C 108,990 15 T vs. C 0.2 (T) 0.225 (T) 0.84 (0.80-0.88) 0 (0-50) 4.05e-13
rs73178986 chr3:182815540 MCCC1 All: C 108,990 15 A vs. G 0.142 (A) - 0.79 (0.74-0.84) 0 (0-43) 7.15e-13
rs73178998 chr3:182833363 MCCC1 All: C 108,990 15 A vs. G 0.2 (A) 0.192 (A) 0.84 (0.80-0.88) 0 (0-48) 1.25e-12
rs73180903 chr3:182836851 MCCC1 [+2988bp] All: C 108,990 15 T vs. C 0.2 (T) 0.225 (T) 0.84 (0.80-0.88) 0 (0-49) 1.85e-12
rs56075297 chr3:182839415 LAMP3 [-586bp] All: C 108,990 15 G vs. A - - 1.18 (1.13-1.24) 0 (0-51) 9.07e-12
rs9882050 chr3:182800039 MCCC1 All: C 108,990 15 T vs. C 0.225 (T) 0.467 (C) 0.86 (0.83-0.90) 19 (0-56) 1.63e-11
rs11718831 chr3:182854377 LAMP3 All: C 108,990 15 T vs. C - - 1.19 (1.13-1.25) 0 (0-44) 3.49e-11
rs3821520 chr3:182851513 LAMP3 All: C 108,990 15 G vs. A 0.2 (G) 0.225 (G) 0.85 (0.81-0.89) 0 (0-50) 3.59e-11
rs73180930 chr3:182860042 LAMP3 All: C 108,990 15 T vs. C 0.2 (T) 0.208 (T) 0.85 (0.81-0.89) 7 (0-57) 3.83e-11
rs3772714 chr3:182849509 LAMP3 All: C 108,990 15 C vs. T 0.208 (C) 0.225 (C) 0.85 (0.81-0.89) 0 (0-46) 4.01e-11
rs1393586 chr3:182859353 LAMP3 All: C 108,990 15 C vs. T 0.192 (C) 0.225 (C) 0.85 (0.81-0.89) 5 (0-56) 4.22e-11
rs3821517 chr3:182849739 LAMP3 All: C 108,990 15 A vs. G 0.2 (A) 0.217 (A) 0.85 (0.81-0.89) 0 (0-47) 4.44e-11
rs111548965 chr3:182809650 MCCC1 All: C 108,990 15 A vs. C - - 1.17 (1.11-1.23) 2 (0-54) 8.58e-10
rs574718 chr3:182847981 LAMP3 All: C 108,990 15 T vs. C - - 1.13 (1.08-1.17) 24 (0-59) 4.69e-09
rs668802 chr3:182838318 LAMP3 [-1683bp] All: C 108,990 15 G vs. A 0.275 (G) 0.425 (G) 0.89 (0.85-0.93) 23 (0-58) 6.57e-09
rs629478 chr3:182857263 LAMP3 All: C 108,990 15 G vs. A 0.325 (G) 0.483 (A) 0.90 (0.87-0.94) 29 (0-62) 7.48e-08
rs551488 chr3:182857426 LAMP3 All: C 108,990 15 C vs. T 0.325 (C) 0.492 (T) 0.91 (0.87-0.94) 30 (0-62) 9.97e-08
rs573813 chr3:182848083 LAMP3 All: C 108,990 15 C vs. A - - 1.10 (1.06-1.15) 30 (0-62) 1.01e-07
rs515818 chr3:182852427 LAMP3 All: C 108,990 15 G vs. A 0.333 (G) 0.492 (A) 0.91 (0.88-0.94) 30 (0-62) 1.06e-07
rs649355 chr3:182851435 LAMP3 All: C 108,990 15 C vs. T 0.325 (C) 0.492 (T) 0.91 (0.88-0.94) 30 (0-63) 1.20e-07
rs599011 chr3:182855032 LAMP3 All: C 108,990 15 G vs. A 0.333 (G) 0.492 (A) 0.91 (0.88-0.94) 31 (0-63) 1.27e-07
rs79155994 chr3:182862135 LAMP3 All: C 108,990 15 G vs. A 0.15 (G) 0.192 (G) 0.87 (0.82-0.92) 17 (0-54) 2.72e-06
rs522235 chr3:182858287 LAMP3 All: C 108,990 15 C vs. T 0.392 (C) 0.5 (C) 0.92 (0.89-0.95) 0 (0-51) 2.78e-06
rs675924 chr3:182859401 LAMP3 All: C 108,990 15 G vs. T 0.392 (G) 0.5 (G) 0.92 (0.89-0.96) 0 (0-51) 4.35e-06
rs831256 chr3:182858461 LAMP3 All: C 108,990 15 A vs. G 0.392 (A) 0.492 (G) 0.93 (0.89-0.96) 0 (0-51) 6.42e-06
rs7639990 chr3:182861174 LAMP3 All: C 108,990 15 T vs. G 0.325 (T) 0.258 (T) 0.92 (0.89-0.96) 0 (0-49) 9.51e-06
rs111487892 chr3:182870681 LAMP3 All: C 108,990 15 C vs. T 0.1 (C) 0.192 (C) 0.86 (0.80-0.92) 12 (0-49) 1.16e-05
rs79275625 chr3:182870662 LAMP3 All: C 108,990 15 A vs. G 0.1 (A) 0.192 (A) 0.86 (0.80-0.92) 11 (0-49) 1.31e-05
rs76730564 chr3:182862450 LAMP3 All: C 108,990 15 T vs. C 0.1 (T) 0.167 (T) 0.87 (0.82-0.93) 9 (0-47) 1.36e-05
rs138006075 chr3:182867156 LAMP3 All: C 108,990 15 C vs. T - - 1.15 (1.08-1.22) 10 (0-47) 1.55e-05
rs77611354 chr3:182862740 LAMP3 All: C 108,990 15 C vs. T 0.1 (C) 0.175 (C) 0.87 (0.82-0.93) 7 (0-43) 1.70e-05
rs74965417 chr3:182863840 LAMP3 All: C 108,990 15 G vs. A 0.1 (G) 0.208 (G) 0.88 (0.82-0.93) 9 (0-46) 2.05e-05
rs676290 chr3:182859449 LAMP3 All: C 102,085 14 T vs. C 0.4 (T) 0.5 (T) 0.92 (0.89-0.96) 0 (0-54) 2.38e-05
rs145445128 chr3:182863519 LAMP3 All: C 108,990 15 C vs. A - - 1.15 (1.08-1.22) 5 (0-56) 2.45e-05
rs75413779 chr3:182865515 LAMP3 All: C 108,990 15 T vs. C 0.1 (T) 0.208 (T) 0.88 (0.82-0.93) 12 (0-49) 2.65e-05
rs78939752 chr3:182866455 LAMP3 All: C 108,990 15 C vs. T 0.1 (C) 0.208 (C) 0.88 (0.83-0.93) 11 (0-49) 2.68e-05
rs111869263 chr3:182866935 LAMP3 All: C 108,990 15 T vs. C 0.1 (T) 0.208 (T) 0.88 (0.83-0.93) 11 (0-49) 2.70e-05
rs2280563 chr3:182872318 LAMP3 All: C 108,990 15 T vs. C 0.092 (T) 0.183 (T) 0.88 (0.83-0.93) 14 (0-52) 2.73e-05
rs114318380 chr3:182871130 LAMP3 All: C 108,990 15 A vs. G 0.1 (A) 0.192 (A) 0.87 (0.81-0.93) 18 (0-55) 2.91e-05

Association studies for this region [+]