LAMP3, chr3:182840001-182881627 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs11711441 chr3:182821275 MCCC1 All: C 108,990 15 A vs. G 0.2 (A) 0.25 (A) 0.83 (0.79-0.87) 0 (0-53) 2.54e-14
Meta_image?name=rs11711441

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs41319644 chr3:182896127 MCF2L2 C - 13 A vs. G - - <1 (-) 0 (-) <0.05
rs534333 chr3:182907865 MCF2L2 C - 13 T vs. C 0.3 (T) 0.142 (T) <1 (-) 0 (-) <0.05
rs10937116 chr3:182901075 MCF2L2 C - 13 A vs. G 0.217 (G) 0.467 (G) >1 (-) 0 (-) <0.05
rs11718681 chr3:182893003 MCF2L2 [-2828bp] C - 13 T vs. G 0.217 (T) 0.392 (T) <1 (-) 0 (-) <0.05
rs2103062 chr3:182924298 MCF2L2 C - 13 A vs. G 0.342 (G) 0.292 (G) <1 (-) 14 (-) <0.05
rs9838250 chr3:182927262 MCF2L2 C - 13 T vs. C 0.35 (C) 0.267 (C) <1 (-) 12 (-) <0.05
rs35813649 chr3:182900353 MCF2L2 C - 13 A vs. G 0.217 (G) 0.392 (G) >1 (-) 0 (-) <0.05
rs61469447 chr3:182899223 MCF2L2 C - 13 C vs. G 0.208 (C) 0.392 (C) <1 (-) 0 (-) <0.05
rs13095031 chr3:182915574 MCF2L2 C - 13 A vs. C 0.275 (A) 0.283 (A) >1 (-) 0 (-) <0.05
rs1983421 chr3:182913945 MCF2L2 C - 13 T vs. C 0.342 (T) 0.275 (T) >1 (-) 18 (-) <0.05
rs664010 chr3:182899738 MCF2L2 C - 13 T vs. G 0.308 (G) 0.467 (G) >1 (-) 0 (-) <0.05
rs9290753 chr3:182916196 MCF2L2 C - 13 T vs. C 0.35 (T) 0.283 (T) >1 (-) 16 (-) <0.05
rs903950 chr3:182928723 MCF2L2 C - 13 T vs. G 0.3 (G) 0.283 (G) <1 (-) 0 (-) <0.05
rs6800128 chr3:182915214 MCF2L2 C - 13 A vs. C 0.342 (A) 0.283 (A) >1 (-) 11 (-) <0.05
rs6787284 chr3:182928776 MCF2L2 C - 13 A vs. G 0.342 (G) 0.283 (G) <1 (-) 11 (-) <0.05
rs13063997 chr3:182924735 MCF2L2 C - 13 A vs. G - - <1 (-) 0 (-) <0.05
rs13095879 chr3:182910050 MCF2L2 C - 13 T vs. C 0.483 (C) 0.442 (T) >1 (-) 0 (-) <0.05
rs683302 chr3:182895091 MCF2L2 [-740bp] C - 13 T vs. C - - <1 (-) 0 (-) <0.05
rs519088 chr3:182895046 MCF2L2 [-785bp] C - 13 A vs. G - - >1 (-) 0 (-) <0.05
rs681516 chr3:182894734 MCF2L2 [-1097bp] C - 13 T vs. C 0.317 (T) 0.475 (T) <1 (-) 0 (-) <0.05
rs484315 chr3:182893594 MCF2L2 [-2237bp] C - 13 C vs. G 0.325 (G) 0.475 (G) >1 (-) 0 (-) <0.05
rs512071 chr3:182894336 MCF2L2 [-1495bp] C - 13 T vs. C 0.317 (C) 0.475 (C) >1 (-) 0 (-) <0.05
rs4859275 chr3:182814131 MCCC1 C - 13 A vs. T - - <1 (-) 42 (-) <0.05
rs4859276 chr3:182814824 MCCC1 C - 13 C vs. G 0.4 (G) 0.442 (C) >1 (-) 42 (-) <0.05
rs74649132 chr3:182925233 MCF2L2 C - 13 T vs. G 0.05 (G) - <1 (-) 0 (-) <0.05
rs3732604 chr3:182810144 MCCC1 C - 13 T vs. G 0.367 (T) 0.425 (G) <1 (-) 24 (-) <0.05
rs6443851 chr3:182819049 MCCC1 C - 13 A vs. G - - <1 (-) 40 (-) <0.05
rs13077633 chr3:182879396 LAMP3 C - 12 T vs. C 0.092 (T) 0.125 (T) <1 (-) 18 (-) <0.05
rs71314284 chr3:182878255 LAMP3 C - 12 T vs. C 0.092 (T) 0.125 (T) <1 (-) 17 (-) <0.05
rs17803349 chr3:182878123 LAMP3 C - 12 T vs. C 0.092 (T) 0.125 (T) <1 (-) 17 (-) <0.05
rs13078394 chr3:182879648 LAMP3 C - 12 C vs. G 0.092 (C) 0.125 (C) <1 (-) 17 (-) <0.05
rs13077467 chr3:182879326 LAMP3 C - 12 C vs. G - - >1 (-) 17 (-) <0.05
rs3811729 chr3:182880480 LAMP3 C - 12 A vs. G 0.083 (G) 0.1 (G) >1 (-) 17 (-) <0.05
rs4630966 chr3:182921803 MCF2L2 C - 13 T vs. C 0.183 (C) 0.258 (C) <1 (-) 0 (-) <0.05
rs7621440 chr3:182890414 MCF2L2 [-5417bp] C - 9 T vs. C 0.283 (T) 0.2 (T) >1 (-) 0 (-) <0.05
rs76694075 chr3:182883826 LAMP3 [+2199bp] C - 12 T vs. G 0.1 (T) 0.083 (T) <1 (-) 11 (-) <0.05
rs35556810 chr3:182883340 LAMP3 [+1713bp] C - 12 A vs. C 0.058 (C) 0.092 (C) >1 (-) 16 (-) <0.05
rs35592835 chr3:182883344 LAMP3 [+1717bp] C - 12 A vs. G 0.067 (A) 0.075 (A) <1 (-) 16 (-) <0.05
rs2001449 chr3:182928936 MCF2L2 C - 13 C vs. G 0.183 (C) 0.233 (C) >1 (-) 0 (-) <0.05
rs577136 chr3:182913092 MCF2L2 C - 13 T vs. G 0.45 (G) 0.417 (G) <1 (-) 14 (-) <0.05
rs13084610 chr3:182880797 LAMP3 C - 12 A vs. G - - <1 (-) 14 (-) <0.05
rs6786083 chr3:182883075 LAMP3 [+1448bp] C - 12 C vs. G - - <1 (-) 0 (-) <0.05
rs571761 chr3:182912526 MCF2L2 C - 13 C vs. G 0.458 (G) 0.4 (G) <1 (-) 13 (-) <0.05
rs35862933 chr3:182883791 LAMP3 [+2164bp] C - 12 T vs. C 0.1 (C) 0.092 (C) >1 (-) 21 (-) <0.05
rs684174 chr3:182912282 MCF2L2 C - 13 T vs. C 0.442 (T) 0.375 (T) >1 (-) 13 (-) <0.05
rs77814004 chr3:182881422 LAMP3 C - 12 A vs. G 0.075 (G) 0.117 (G) >1 (-) 16 (-) >0.05
rs71314289 chr3:182882340 LAMP3 [+713bp] C - 12 T vs. C 0.1 (C) 0.125 (C) >1 (-) 17 (-) >0.05
rs13090403 chr3:182881818 LAMP3 [+191bp] C - 12 T vs. C - - <1 (-) 16 (-) >0.05
rs34992803 chr3:182881614 LAMP3 C - 12 T vs. G 0.1 (T) 0.108 (T) <1 (-) 21 (-) >0.05
rs13094740 chr3:182881893 LAMP3 [+266bp] C - 12 A vs. G - - >1 (-) 16 (-) >0.05

Association studies for this region [+]