LAMP3, chr3:182840001-182881627 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region
Append your own data and create meta-analysis

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs11711441 chr3:182821275 MCCC1 All: C 108,990 15 A vs. G 0.2 (A) 0.25 (A) 0.83 (0.79-0.87) 0 (0-53) 2.54e-14
Meta_image?name=rs11711441

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs147387418 chr3:182851075 LAMP3 C - 8 T vs. C - - <1 (-) 0 (-) >0.05
rs670232 chr3:182890020 MCF2L2 [-5811bp] C - 13 A vs. T 0.108 (A) 0.083 (A) <1 (-) 0 (-) >0.05
rs575386 chr3:182890262 MCF2L2 [-5569bp] C - 13 C vs. G 0.108 (C) 0.083 (C) <1 (-) 0 (-) >0.05
rs575326 chr3:182890241 MCF2L2 [-5590bp] C - 13 T vs. C 0.108 (C) 0.083 (C) >1 (-) 0 (-) >0.05
rs114211523 chr3:182876733 LAMP3 C - 13 A vs. T 0.058 (T) - >1 (-) 31 (-) >0.05
rs71634235 chr3:182824520 MCCC1 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs12493054 chr3:182872626 LAMP3 C - 13 A vs. G 0.1 (G) 0.058 (G) <1 (-) 45 (-) >0.05
rs113687724 chr3:182876343 LAMP3 C - 4 T vs. C - - <1 (-) 0 (-) >0.05
rs12496658 chr3:182869163 LAMP3 C - 13 T vs. C 0.1 (T) 0.025 (T) >1 (-) 45 (-) >0.05
rs75941068 chr3:182861364 LAMP3 C - 13 T vs. C 0.042 (T) - >1 (-) 1 (-) >0.05
rs115196257 chr3:182916536 MCF2L2 C - 11 T vs. C 0.033 (C) - <1 (-) 0 (-) >0.05
rs4610254 chr3:182916673 MCF2L2 C - 12 T vs. C 0.008 (T) 0.0 (T) >1 (-) 0 (-) >0.05
rs1540737 chr3:182876928 LAMP3 C - 13 A vs. G 0.117 (G) 0.325 (G) <1 (-) 35 (-) >0.05
rs80116725 chr3:182882567 LAMP3 [+940bp] C - 5 A vs. G 0.017 (A) - <1 (-) 0 (-) >0.05
chr3:182834546 chr3:182834546 MCCC1 [+683bp] C - 6 A vs. G - - >1 (-) 0 (-) >0.05
rs2017340 chr3:182928791 MCF2L2 C - 12 T vs. C 0.008 (C) 0.0 (C) <1 (-) 0 (-) >0.05
rs75470872 chr3:182859619 LAMP3 C - 13 A vs. C 0.025 (A) - <1 (-) 29 (-) >0.05
rs77037932 chr3:182848752 LAMP3 C - 12 T vs. C 0.042 (T) 0.217 (T) >1 (-) 37 (-) >0.05
rs145702608 chr3:182919412 MCF2L2 C - 11 T vs. C - - >1 (-) 0 (-) >0.05
rs2314415 chr3:182922537 MCF2L2 C - 10 A vs. C 0.158 (C) 0.008 (C) >1 (-) 11 (-) >0.05
rs1502761 chr3:182894673 MCF2L2 [-1158bp] C - 13 A vs. C 0.117 (A) 0.075 (A) <1 (-) 0 (-) >0.05
rs75639290 chr3:182852568 LAMP3 C - 13 C vs. G 0.025 (C) - <1 (-) 26 (-) >0.05
rs116005924 chr3:182858111 LAMP3 C - 13 T vs. C 0.008 (T) - <1 (-) 29 (-) >0.05
rs79034696 chr3:182851057 LAMP3 C - 13 A vs. G 0.058 (A) 0.058 (A) >1 (-) 1 (-) >0.05
rs35597162 chr3:182853554 LAMP3 C - 13 A vs. G 0.025 (A) - <1 (-) 26 (-) >0.05
rs631755 chr3:182887921 LAMP3 [+6294bp] C - 13 A vs. C - - <1 (-) 0 (-) >0.05
rs147138145 chr3:182850087 LAMP3 C - 13 A vs. G - - <1 (-) 26 (-) >0.05
rs111559465 chr3:182884401 LAMP3 [+2774bp] C - 13 A vs. G - - >1 (-) 48 (-) >0.05
rs9850075 chr3:182888865 MCF2L2 [-6966bp] C - 13 C vs. G 0.108 (G) - >1 (-) 0 (-) >0.05
rs7635891 chr3:182930018 MCF2L2 C - 10 T vs. G 0.042 (G) - <1 (-) 6 (-) >0.05
rs13434055 chr3:182889449 MCF2L2 [-6382bp] C - 13 T vs. C 0.108 (C) 0.083 (C) >1 (-) 0 (-) >0.05
rs1629673 chr3:182889310 MCF2L2 [-6521bp] C - 13 A vs. G 0.108 (G) 0.083 (G) >1 (-) 0 (-) >0.05
rs647434 chr3:182889192 MCF2L2 [-6639bp] C - 13 A vs. T 0.108 (A) 0.075 (A) <1 (-) 0 (-) >0.05
rs75740475 chr3:182845491 LAMP3 C - 13 A vs. G 0.025 (A) - <1 (-) 28 (-) >0.05
rs521981 chr3:182889001 MCF2L2 [-6830bp] C - 13 T vs. C 0.108 (C) 0.083 (C) >1 (-) 0 (-) >0.05
rs7648312 chr3:182869141 LAMP3 C - 13 T vs. C - 0.208 (T) <1 (-) 0 (-) >0.05
rs6804951 chr3:182925404 MCF2L2 C - 10 T vs. C 0.042 (T) 0.0 (T) <1 (-) 13 (-) >0.05
rs9827084 chr3:182924862 MCF2L2 C - 10 C vs. G 0.042 (C) - <1 (-) 13 (-) >0.05
rs9864865 chr3:182925049 MCF2L2 C - 10 A vs. G 0.05 (A) 0.0 (A) <1 (-) 13 (-) >0.05
rs544146 chr3:182889168 MCF2L2 [-6663bp] C - 13 A vs. G 0.108 (A) 0.083 (A) <1 (-) 0 (-) >0.05
rs1403452 chr3:182926028 MCF2L2 C - 10 T vs. C 0.033 (C) 0.0 (C) <1 (-) 9 (-) >0.05
chr3:182882133 chr3:182882133 LAMP3 [+506bp] C - 5 A vs. G - - >1 (-) 0 (-) >0.05
rs6770548 chr3:182925799 MCF2L2 C - 10 A vs. G 0.042 (A) 0.0 (A) >1 (-) 9 (-) >0.05
rs630527 chr3:182887667 LAMP3 [+6040bp] C - 13 A vs. G 0.117 (A) 0.075 (A) <1 (-) 0 (-) >0.05
rs488277 chr3:182887673 LAMP3 [+6046bp] C - 13 T vs. C 0.117 (C) 0.083 (C) 1 (-) 0 (-) >0.05

Association studies for this region [+]