LINGO3, chr19:2289774-2308156 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1128402 chr19:2353150 LSM7 [+24531bp] All: C 103,235 14 A vs. C 0.283 (A) 0.342 (C) 1.12 (1.08-1.17) 46 (0-71) 8.40e-09
Meta_image?name=rs1128402

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs8112783 chr19:2315740 LSM7 [-5776bp] C - 11 T vs. G 0.058 (T) 0.392 (T) >1 (-) 40 (-) <0.05
rs4807225 chr19:2315387 LSM7 [-6129bp] C - 11 T vs. C 0.058 (T) 0.4 (T) >1 (-) 40 (-) <0.05
rs28435559 chr19:2316418 LSM7 [-5098bp] C - 11 A vs. G 0.058 (A) 0.4 (A) >1 (-) 39 (-) <0.05
rs4807224 chr19:2315236 LSM7 [-6280bp] C - 11 C vs. G 0.058 (C) 0.4 (C) >1 (-) 40 (-) <0.05
rs11084933 chr19:2335370 LSM7 [+6751bp] C - 12 T vs. C - - <1 (-) 51 (-) <0.05
rs143367040 chr19:2345099 LSM7 [+16480bp] C - 5 A vs. G - - >1 (-) 36 (-) <0.05
rs2865074 chr19:2255819 JSRP1 C - 10 T vs. C 0.183 (T) 0.083 (T) >1 (-) 0 (-) <0.05
rs886363 chr19:2255336 JSRP1 C - 10 A vs. G 0.192 (A) 0.067 (A) >1 (-) 0 (-) <0.05
rs7258448 chr19:2257230 JSRP1 C - 10 C vs. G 0.225 (G) 0.092 (G) <1 (-) 0 (-) <0.05
rs2523170 chr19:2268499 JSRP1 C - 11 A vs. T 0.242 (A) 0.1 (A) >1 (-) 0 (-) <0.05
rs10409081 chr19:2257514 JSRP1 C - 11 T vs. C 0.192 (T) 0.075 (T) >1 (-) 0 (-) <0.05
rs58070120 chr19:2264497 JSRP1 C - 11 T vs. C 0.3 (T) 0.308 (C) >1 (-) 0 (-) <0.05
rs12610725 chr19:2343845 LSM7 [+15226bp] C - 11 T vs. C 0.108 (T) 0.042 (T) <1 (-) 0 (-) <0.05
rs12610598 chr19:2343630 LSM7 [+15011bp] C - 11 A vs. G 0.092 (A) - <1 (-) 0 (-) <0.05
rs2523168 chr19:2266821 JSRP1 C - 11 C vs. G 0.208 (G) 0.1 (G) <1 (-) 0 (-) <0.05
rs2523177 chr19:2274578 C19orf35 [-53bp] C - 11 T vs. C 0.217 (T) 0.133 (T) >1 (-) 0 (-) >0.05
rs117849041 chr19:2312903 LINGO3 [+4747bp] C - 10 T vs. C 0.092 (T) - >1 (-) 31 (-) >0.05
rs8108923 chr19:2305651 LINGO3 C - 11 T vs. C 0.333 (T) 0.2 (T) >1 (-) 35 (-) >0.05
rs2865077 chr19:2261021 JSRP1 C - 11 A vs. T - - <1 (-) 0 (-) >0.05
rs8113619 chr19:2263458 JSRP1 C - 11 A vs. T - - <1 (-) 0 (-) >0.05
rs2523169 chr19:2267939 JSRP1 C - 11 A vs. G 0.267 (A) 0.1 (A) >1 (-) 0 (-) >0.05
rs2523175 chr19:2271323 OAZ1 C - 11 A vs. G 0.217 (A) 0.125 (A) >1 (-) 0 (-) >0.05
rs2523174 chr19:2271181 OAZ1 C - 11 T vs. C 0.217 (T) 0.133 (T) >1 (-) 0 (-) >0.05
rs12982784 chr19:2346882 LSM7 [+18263bp] C - 11 T vs. C 0.458 (T) 0.092 (T) <1 (-) 23 (-) >0.05
rs62119668 chr19:2267526 JSRP1 C - 11 A vs. G - - <1 (-) 0 (-) >0.05
rs12974520 chr19:2262505 JSRP1 C - 11 A vs. T - - >1 (-) 0 (-) >0.05
rs886881 chr19:2321854 LSM7 C - 12 C vs. G 0.267 (G) 0.308 (C) <1 (-) 51 (-) >0.05
rs2074457 chr19:2271282 OAZ1 C - 11 T vs. C 0.233 (T) 0.117 (T) >1 (-) 0 (-) >0.05
rs10409063 chr19:2276710 C19orf35 C - 11 T vs. C 0.217 (T) 0.125 (T) >1 (-) 0 (-) >0.05
rs117324377 chr19:2339975 LSM7 [+11356bp] C - 11 T vs. C 0.117 (T) - <1 (-) 0 (-) >0.05
rs115062290 chr19:2324667 LSM7 C - 4 C vs. G 0.075 (G) - <1 (-) 0 (-) >0.05
rs11883146 chr19:2339702 LSM7 [+11083bp] C - 11 T vs. C 0.117 (T) - <1 (-) 0 (-) >0.05
rs12984128 chr19:2325360 LSM7 C - 11 A vs. G 0.367 (A) 0.267 (G) >1 (-) 56 (-) >0.05
rs34070908 chr19:2335872 LSM7 [+7253bp] C - 11 T vs. C 0.267 (T) 0.233 (T) <1 (-) 6 (-) >0.05
rs62119711 chr19:2296903 LINGO3 C - 11 T vs. C - - >1 (-) 0 (-) >0.05
rs55855802 chr19:2265531 JSRP1 C - 11 T vs. C 0.333 (C) 0.4 (T) <1 (-) 0 (-) >0.05
rs2523173 chr19:2270634 OAZ1 C - 11 T vs. C 0.325 (C) 0.358 (T) <1 (-) 0 (-) >0.05
rs2074458 chr19:2271741 OAZ1 C - 11 A vs. G 0.342 (G) 0.342 (A) <1 (-) 0 (-) >0.05
rs145026607 chr19:2335624 LSM7 [+7005bp] C - 11 T vs. C - - <1 (-) 0 (-) >0.05
rs75527053 chr19:2338601 LSM7 [+9982bp] C - 11 C vs. G 0.117 (G) 0.067 (G) >1 (-) 0 (-) >0.05
rs12985777 chr19:2268055 JSRP1 C - 11 T vs. C 0.258 (T) 0.1 (T) >1 (-) 7 (-) >0.05
rs62119704 chr19:2267563 JSRP1 C - 11 T vs. C - - <1 (-) 0 (-) >0.05
rs28718565 chr19:2316597 LSM7 [-4919bp] C - 12 T vs. C 0.233 (C) 0.325 (T) <1 (-) 34 (-) >0.05
rs2250625 chr19:2270099 OAZ1 C - 11 T vs. C 0.342 (C) 0.333 (T) <1 (-) 0 (-) >0.05
rs8109162 chr19:2309034 LINGO3 [+878bp] C - 11 A vs. G 0.075 (A) 0.383 (A) >1 (-) 47 (-) >0.05
rs34741325 chr19:2338171 LSM7 [+9552bp] C - 11 A vs. G 0.125 (A) 0.042 (A) <1 (-) 0 (-) >0.05
rs7253263 chr19:2317060 LSM7 [-4456bp] C - 12 A vs. G - - <1 (-) 45 (-) >0.05
rs4807227 chr19:2318180 LSM7 [-3336bp] C - 12 T vs. C 0.275 (C) 0.325 (T) <1 (-) 45 (-) >0.05
rs78720096 chr19:2336737 LSM7 [+8118bp] C - 11 A vs. G 0.117 (A) 0.05 (A) <1 (-) 0 (-) >0.05
rs730417 chr19:2317666 LSM7 [-3850bp] C - 12 T vs. C 0.275 (C) 0.325 (T) <1 (-) 45 (-) >0.05

Association studies for this region [+]