LINGO3, chr19:2289774-2308156 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1128402 chr19:2353150 LSM7 [+24531bp] All: C 103,235 14 A vs. C 0.283 (A) 0.342 (C) 1.12 (1.08-1.17) 46 (0-71) 8.40e-09
Meta_image?name=rs1128402

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs114142346 chr19:2247225 SF3A2 C - 10 A vs. C 0.042 (C) - >1 (-) 0 (-) >0.05
rs116872179 chr19:2301128 LINGO3 C - 11 A vs. G 0.025 (A) - >1 (-) 0 (-) >0.05
rs10401294 chr19:2267356 JSRP1 C - 11 A vs. G - - >1 (-) 0 (-) >0.05
rs4807219 chr19:2275471 C19orf35 C - 11 T vs. C 0.075 (T) 0.483 (C) >1 (-) 0 (-) >0.05
rs12979409 chr19:2270370 OAZ1 C - 11 T vs. G 0.108 (T) 0.5 (T) >1 (-) 0 (-) >0.05
rs12985247 chr19:2274359 C19orf35 [-272bp] C - 11 T vs. C 0.083 (T) 0.483 (C) >1 (-) 0 (-) >0.05
rs117020035 chr19:2248717 SF3A2 [+39bp] C - 8 A vs. G 0.025 (A) - <1 (-) 0 (-) >0.05
rs11084931 chr19:2319153 LSM7 [-2363bp] C - 12 A vs. C 0.2 (C) 0.233 (C) <1 (-) 41 (-) >0.05
rs10407022 chr19:2249477 AMH C - 9 T vs. G 0.125 (G) 0.283 (G) <1 (-) 0 (-) >0.05
rs4807223 chr19:2313800 LINGO3 [+5644bp] C - 12 A vs. G 0.117 (A) 0.233 (A) <1 (-) 12 (-) >0.05
rs8110136 chr19:2311086 LINGO3 [+2930bp] C - 9 T vs. G - 0.208 (T) <1 (-) 49 (-) >0.05
rs77028998 chr19:2321939 LSM7 C - 11 A vs. G 0.042 (A) 0.217 (A) <1 (-) 47 (-) >0.05
rs56137104 chr19:2267556 JSRP1 C - 11 A vs. G - - >1 (-) 0 (-) >0.05
rs75469452 chr19:2253267 JSRP1 C - 4 T vs. C 0.008 (T) 0.025 (T) >1 (-) 45 (-) >0.05
rs4806836 chr19:2269829 OAZ1 C - 11 T vs. C 0.083 (T) 0.492 (C) >1 (-) 0 (-) >0.05
rs12981166 chr19:2270386 OAZ1 C - 11 T vs. C 0.1 (T) 0.483 (C) >1 (-) 0 (-) >0.05
rs4807217 chr19:2257608 JSRP1 C - 5 A vs. G - - <1 (-) 49 (-) >0.05
rs3787013 chr19:2254408 JSRP1 C - 5 A vs. G - 0.208 (A) >1 (-) 30 (-) >0.05
rs12983632 chr19:2272511 OAZ1 C - 11 T vs. C 0.083 (T) 0.475 (C) >1 (-) 0 (-) >0.05
rs113581583 chr19:2342955 LSM7 [+14336bp] C - 8 T vs. C 0.025 (T) - <1 (-) 13 (-) >0.05
rs139359677 chr19:2326143 LSM7 C - 8 T vs. C - - <1 (-) 0 (-) >0.05
rs115504014 chr19:2282022 C19orf35 C - 3 A vs. G 0.033 (A) 0.042 (A) >1 (-) 55 (-) >0.05
rs150276774 chr19:2311144 LINGO3 [+2988bp] C - 8 T vs. C - - <1 (-) 0 (-) >0.05
rs7250822 chr19:2255311 JSRP1 C - 5 C vs. G - 0.225 (G) <1 (-) 30 (-) >0.05
rs10415913 chr19:2259505 JSRP1 C - 7 A vs. G 0.067 (A) 0.5 (A) >1 (-) 40 (-) >0.05
rs11880345 chr19:2341059 LSM7 [+12440bp] C - 11 A vs. G 0.333 (G) 0.483 (G) >1 (-) 22 (-) >0.05
rs16991095 chr19:2310756 LINGO3 [+2600bp] C - 9 T vs. G 0.067 (T) 0.225 (T) >1 (-) 39 (-) >0.05
rs4806834 chr19:2260361 JSRP1 C - 5 T vs. C 0.05 (T) 0.25 (T) >1 (-) 50 (-) >0.05
rs2108525 chr19:2314153 LINGO3 [+5997bp] C - 12 T vs. C - - >1 (-) 18 (-) >0.05
rs79961092 chr19:2309132 LINGO3 [+976bp] C - 8 T vs. C 0.067 (T) 0.233 (T) <1 (-) 58 (-) >0.05
rs79255564 chr19:2310023 LINGO3 [+1867bp] C - 8 A vs. G 0.067 (G) 0.233 (G) >1 (-) 58 (-) >0.05
rs79008834 chr19:2309675 LINGO3 [+1519bp] C - 8 A vs. C 0.067 (A) 0.233 (A) <1 (-) 58 (-) >0.05
rs73518414 chr19:2278755 C19orf35 C - 11 T vs. C 0.1 (T) 0.483 (C) <1 (-) 0 (-) >0.05
rs4806835 chr19:2266879 JSRP1 C - 11 A vs. T 0.125 (A) 0.483 (T) >1 (-) 0 (-) >0.05

Association studies for this region [+]