LRRK2, chr12:40590546-40763087 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs76904798 chr12:40614434 LRRK2 All: C 120,238 21 T vs. C 0.158 (T) - 1.16 (1.11-1.20) 0 (0-47) 4.86e-14
Meta_image?name=rs76904798

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs12422719 chr12:40773745 LRRK2 [+10658bp] C - 8 C vs. G 0.017 (T) - <1 (-) 9 (-) >0.05
rs140696058 chr12:40812330 MUC19 C - 9 A vs. C - - >1 (-) 0 (-) >0.05
rs112677925 chr12:40751634 LRRK2 C - 13 A vs. G 0.042 (A) - >1 (-) 0 (-) >0.05
rs118037563 chr12:40802786 MUC19 C - 8 C vs. G - 0.025 (C) >1 (-) 0 (-) >0.05
rs73107141 chr12:40771193 LRRK2 [+8106bp] C - 13 A vs. T 0.117 (A) - <1 (-) 0 (-) >0.05
rs10878222 chr12:40610718 LRRK2 C - 13 A vs. G 0.458 (A) 0.3 (A) <1 (-) 0 (-) >0.05
rs17444075 chr12:40719339 LRRK2 C - 11 T vs. G - - <1 (-) 17 (-) >0.05
rs10878551 chr12:40812123 MUC19 C - 13 T vs. C 0.333 (T) 0.325 (T) <1 (-) 25 (-) >0.05
rs2708427 chr12:40598939 LRRK2 C - 13 T vs. C 0.342 (C) 0.375 (C) >1 (-) 0 (-) >0.05
rs12827541 chr12:40609979 LRRK2 C - 13 T vs. C 0.458 (T) 0.308 (T) <1 (-) 0 (-) >0.05
rs79284993 chr12:40797003 MUC19 C - 11 A vs. G - 0.017 (A) >1 (-) 3 (-) >0.05
rs10878220 chr12:40608880 LRRK2 C - 13 T vs. C 0.45 (T) 0.308 (T) <1 (-) 0 (-) >0.05
rs12370996 chr12:40723171 LRRK2 C - 12 T vs. C 0.075 (T) - <1 (-) 0 (-) >0.05
rs1373442 chr12:40789904 MUC19 C - 11 A vs. G - - <1 (-) 2 (-) >0.05
rs146640288 chr12:40566139 LRRK2 [-24407bp] C - 9 A vs. G - - <1 (-) 0 (-) >0.05
rs17466781 chr12:40777742 MUC19 [-9455bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs722817 chr12:40544443 SLC2A13 [+44552bp] C - 13 A vs. T 0.267 (A) 0.333 (T) >1 (-) 0 (-) >0.05
rs150000948 chr12:40631733 LRRK2 C - 4 A vs. C - - <1 (-) 33 (-) >0.05
rs4768246 chr12:40789571 MUC19 C - 13 C vs. G 0.125 (C) - <1 (-) 0 (-) >0.05
rs80203011 chr12:40556010 LRRK2 [-34536bp] C - 5 T vs. C - - >1 (-) 0 (-) >0.05
rs10878507 chr12:40788379 MUC19 C - 13 T vs. C 0.4 (T) 0.467 (T) <1 (-) 15 (-) >0.05
rs10784428 chr12:40604608 LRRK2 C - 13 A vs. C 0.458 (A) - <1 (-) 0 (-) >0.05
rs141979335 chr12:40653696 LRRK2 C - 13 A vs. G - - >1 (-) 27 (-) >0.05
rs11175458 chr12:40568433 LRRK2 [-22113bp] C - 13 A vs. G - - >1 (-) 3 (-) >0.05
rs4768239 chr12:40768582 LRRK2 [+5495bp] C - 13 A vs. G 0.117 (A) - <1 (-) 0 (-) >0.05
rs17444306 chr12:40767112 LRRK2 [+4025bp] C - 13 T vs. C 0.117 (T) - <1 (-) 0 (-) >0.05
rs7307562 chr12:40724960 LRRK2 C - 12 T vs. G 0.467 (T) 0.433 (T) <1 (-) 0 (-) >0.05
rs145976351 chr12:40592151 LRRK2 C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs1472115 chr12:40617621 LRRK2 C - 5 T vs. G - - >1 (-) 0 (-) >0.05
chr12:40628468 chr12:40628468 LRRK2 C - 5 A vs. G - - >1 (-) 16 (-) >0.05
rs138273035 chr12:40804773 MUC19 C - 9 A vs. G - - >1 (-) 0 (-) >0.05
rs147136292 chr12:40658622 LRRK2 C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs61931634 chr12:40625372 LRRK2 C - 13 T vs. C - - <1 (-) 9 (-) >0.05
rs11175814 chr12:40665454 LRRK2 C - 12 A vs. G 0.033 (G) - >1 (-) 0 (-) >0.05
rs11175405 chr12:40557814 LRRK2 [-32732bp] C - 13 T vs. C 0.233 (T) 0.3 (T) <1 (-) 0 (-) >0.05
rs12423774 chr12:40747360 LRRK2 C - 9 T vs. C - - >1 (-) 0 (-) >0.05
rs17444494 chr12:40782721 MUC19 [-4476bp] C - 13 A vs. G 0.125 (A) - <1 (-) 0 (-) >0.05
rs111585307 chr12:40684454 LRRK2 C - 12 A vs. C - - >1 (-) 11 (-) >0.05
rs17466521 chr12:40726567 LRRK2 C - 13 C vs. G 0.217 (G) - <1 (-) 0 (-) >0.05
rs17444709 chr12:40805830 MUC19 C - 13 T vs. C 0.1 (C) - >1 (-) 0 (-) >0.05
rs10878552 chr12:40812230 MUC19 C - 13 A vs. C 0.333 (A) 0.325 (A) <1 (-) 28 (-) >0.05
rs17484286 chr12:40698686 LRRK2 C - 13 A vs. G 0.075 (G) 0.317 (G) >1 (-) 0 (-) >0.05
rs33962975 chr12:40757330 LRRK2 C - 13 A vs. G 0.117 (G) - >1 (-) 0 (-) >0.05
rs7953688 chr12:40778119 MUC19 [-9078bp] C - 13 C vs. G - - <1 (-) 9 (-) >0.05
rs17444481 chr12:40782046 MUC19 [-5151bp] C - 13 T vs. C 0.117 (T) - <1 (-) 0 (-) >0.05
rs148704728 chr12:40781021 MUC19 [-6176bp] C - 13 C vs. G - - <1 (-) 0 (-) >0.05
rs2638267 chr12:40543733 SLC2A13 [+43842bp] C - 13 A vs. G 0.275 (A) 0.325 (G) >1 (-) 0 (-) >0.05
rs11175371 chr12:40548078 LRRK2 [-42468bp] C - 13 A vs. G 0.242 (G) 0.317 (G) >1 (-) 0 (-) >0.05
rs73102251 chr12:40585642 LRRK2 [-4904bp] C - 10 A vs. T - - >1 (-) 29 (-) >0.05
rs2708404 chr12:40575630 LRRK2 [-14916bp] C - 13 A vs. G 0.25 (G) 0.0 (G) <1 (-) 0 (-) >0.05

Association studies for this region [+]