LRRK2, chr12:40590546-40763087 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs76904798 chr12:40614434 LRRK2 All: C 120,238 21 T vs. C 0.158 (T) - 1.16 (1.11-1.20) 0 (0-47) 4.86e-14
Meta_image?name=rs76904798

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs11564190 chr12:40601100 LRRK2 C - 7 A vs. G - - <1 (-) 0 (-) >0.05
rs2708489 chr12:40562442 LRRK2 [-28104bp] C - 13 A vs. G 0.267 (A) 0.317 (G) >1 (-) 0 (-) >0.05
rs17444124 chr12:40724494 LRRK2 C - 13 A vs. C 0.475 (A) 0.325 (C) <1 (-) 32 (-) >0.05
rs715403 chr12:40731183 LRRK2 C - 13 A vs. C 0.292 (C) 0.242 (C) >1 (-) 26 (-) >0.05
rs2638270 chr12:40541158 SLC2A13 [+41267bp] C - 13 A vs. C 0.242 (C) 0.325 (C) >1 (-) 0 (-) >0.05
rs7953822 chr12:40685160 LRRK2 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs142206854 chr12:40778431 MUC19 [-8766bp] C - 6 C vs. G - - <1 (-) 0 (-) >0.05
rs7956721 chr12:40786280 MUC19 [-917bp] C - 13 T vs. G 0.325 (T) 0.317 (T) <1 (-) 40 (-) >0.05
rs1388591 chr12:40546330 LRRK2 [-44216bp] C - 13 T vs. C 0.292 (T) 0.333 (C) >1 (-) 0 (-) >0.05
rs2708421 chr12:40593403 LRRK2 C - 13 T vs. C 0.425 (C) 0.358 (C) <1 (-) 0 (-) >0.05
rs2708481 chr12:40559062 LRRK2 [-31484bp] C - 13 T vs. C 0.267 (T) 0.325 (C) >1 (-) 0 (-) >0.05
rs2708482 chr12:40559368 LRRK2 [-31178bp] C - 13 T vs. C 0.267 (C) 0.317 (T) <1 (-) 0 (-) >0.05
rs2708487 chr12:40560668 LRRK2 [-29878bp] C - 13 T vs. G 0.267 (T) 0.333 (G) >1 (-) 0 (-) >0.05
rs1873613 chr12:40552417 LRRK2 [-38129bp] C - 13 T vs. C 0.267 (T) 0.333 (C) >1 (-) 0 (-) >0.05
rs1873611 chr12:40552581 LRRK2 [-37965bp] C - 13 C vs. G 0.267 (C) 0.333 (G) >1 (-) 0 (-) >0.05
rs11175332 chr12:40541627 SLC2A13 [+41736bp] C - 13 A vs. G 0.242 (G) 0.325 (G) >1 (-) 0 (-) >0.05
rs1388588 chr12:40553296 LRRK2 [-37250bp] C - 13 T vs. C 0.267 (C) 0.325 (T) <1 (-) 0 (-) >0.05
rs2708447 chr12:40649134 LRRK2 C - 13 T vs. C 0.008 (T) - >1 (-) 0 (-) >0.05
rs76524269 chr12:40603349 LRRK2 C - 7 T vs. C - 0.017 (C) <1 (-) 0 (-) >0.05
rs10506155 chr12:40735939 LRRK2 C - 13 A vs. G 0.275 (A) 0.242 (A) <1 (-) 28 (-) >0.05
rs2249017 chr12:40561220 LRRK2 [-29326bp] C - 13 A vs. G 0.283 (A) 0.333 (G) >1 (-) 0 (-) >0.05
rs2249010 chr12:40561428 LRRK2 [-29118bp] C - 13 T vs. C 0.267 (T) 0.333 (C) >1 (-) 0 (-) >0.05
rs1388587 chr12:40561535 LRRK2 [-29011bp] C - 13 C vs. G 0.267 (C) 0.325 (G) >1 (-) 0 (-) >0.05
rs2248928 chr12:40561507 LRRK2 [-29039bp] C - 13 A vs. G 0.267 (A) 0.333 (G) >1 (-) 0 (-) >0.05
rs728624 chr12:40561864 LRRK2 [-28682bp] C - 13 A vs. C 0.267 (A) 0.325 (C) >1 (-) 0 (-) >0.05
rs2638252 chr12:40563475 LRRK2 [-27071bp] C - 13 A vs. T 0.267 (T) 0.325 (A) <1 (-) 0 (-) >0.05
rs17443199 chr12:40586433 LRRK2 [-4113bp] C - 13 C vs. G 0.233 (C) 0.3 (C) <1 (-) 1 (-) >0.05
rs61915610 chr12:40742701 LRRK2 C - 13 T vs. C 0.275 (T) 0.242 (T) <1 (-) 28 (-) >0.05
rs1491928 chr12:40563942 LRRK2 [-26604bp] C - 13 C vs. G 0.275 (C) 0.333 (G) >1 (-) 0 (-) >0.05
rs7974972 chr12:40545488 LRRK2 [-45058bp] C - 13 T vs. C 0.258 (C) - <1 (-) 0 (-) >0.05
rs138538499 chr12:40621589 LRRK2 C - 11 C vs. G - - >1 (-) 15 (-) >0.05
rs149242147 chr12:40690566 LRRK2 C - 8 A vs. G - - >1 (-) 0 (-) >0.05
rs17442853 chr12:40544890 SLC2A13 [+44999bp] C - 13 A vs. G 0.258 (G) - <1 (-) 0 (-) >0.05
rs2708478 chr12:40558661 LRRK2 [-31885bp] C - 13 A vs. G 0.1 (A) - >1 (-) 46 (-) >0.05
rs7132187 chr12:40744808 LRRK2 C - 13 A vs. G 0.267 (A) 0.233 (A) <1 (-) 28 (-) >0.05
rs146033091 chr12:40626894 LRRK2 C - 10 T vs. C - - <1 (-) 12 (-) >0.05
rs11564276 chr12:40551544 LRRK2 [-39002bp] C - 13 A vs. G 0.25 (G) 0.017 (G) <1 (-) 0 (-) >0.05
rs4767962 chr12:40582244 LRRK2 [-8302bp] C - 8 T vs. G - - >1 (-) 0 (-) >0.05
rs17458759 chr12:40540750 SLC2A13 [+40859bp] C - 13 T vs. C 0.258 (C) - <1 (-) 0 (-) >0.05
rs10878278 chr12:40653988 LRRK2 C - 11 T vs. C 0.158 (T) 0.208 (T) >1 (-) 0 (-) >0.05
rs139974017 chr12:40612270 LRRK2 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs7957367 chr12:40786732 MUC19 [-465bp] C - 13 T vs. G 0.325 (G) 0.333 (G) >1 (-) 40 (-) >0.05
rs10878372 chr12:40716694 LRRK2 C - 13 A vs. G 0.192 (G) 0.225 (G) <1 (-) 23 (-) >0.05
rs138971827 chr12:40689626 LRRK2 C - 10 T vs. C - - >1 (-) 0 (-) >0.05
rs28365192 chr12:40547026 LRRK2 [-43520bp] C - 3 T vs. C 0.008 (C) 0.125 (C) >1 (-) 0 (-) >0.05
rs137940245 chr12:40665420 LRRK2 C - 11 A vs. C - - >1 (-) 0 (-) >0.05
rs2896981 chr12:40781584 MUC19 [-5613bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs28365205 chr12:40602417 LRRK2 C - 11 T vs. C - - <1 (-) 9 (-) >0.05
rs7312696 chr12:40695851 LRRK2 C - 13 C vs. G - - >1 (-) 0 (-) >0.05
rs17458766 chr12:40540794 SLC2A13 [+40903bp] C - 13 T vs. G 0.258 (T) - >1 (-) 0 (-) >0.05

Association studies for this region [+]