LRRK2, chr12:40590546-40763087 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs76904798 chr12:40614434 LRRK2 All: C 120,238 21 T vs. C 0.158 (T) - 1.16 (1.11-1.20) 0 (0-47) 4.86e-14
Meta_image?name=rs76904798

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs149913043 chr12:40645629 LRRK2 C - 9 T vs. C - - >1 (-) 27 (-) >0.05
rs2708479 chr12:40558700 LRRK2 [-31846bp] C - 13 A vs. G 0.275 (A) 0.333 (G) >1 (-) 0 (-) >0.05
rs1491925 chr12:40564945 LRRK2 [-25601bp] C - 13 A vs. G 0.208 (G) 0.35 (G) >1 (-) 10 (-) >0.05
rs138259753 chr12:40606348 LRRK2 C - 10 A vs. G - - <1 (-) 0 (-) >0.05
rs10878356 chr12:40709957 LRRK2 C - 13 A vs. G 0.192 (A) 0.225 (A) >1 (-) 24 (-) >0.05
rs1491938 chr12:40645630 LRRK2 C - 13 A vs. G 0.392 (G) 0.367 (A) >1 (-) 0 (-) >0.05
rs11175966 chr12:40703152 LRRK2 C - 13 A vs. C 0.192 (A) 0.225 (A) >1 (-) 24 (-) >0.05
rs11564194 chr12:40559127 LRRK2 [-31419bp] C - 13 T vs. C 0.25 (T) 0.017 (T) >1 (-) 0 (-) >0.05
rs146955017 chr12:40789850 MUC19 C - 8 T vs. C - - <1 (-) 0 (-) >0.05
rs144434562 chr12:40575821 LRRK2 [-14725bp] C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs12371502 chr12:40644305 LRRK2 C - 13 T vs. C 0.383 (T) 0.367 (C) <1 (-) 0 (-) >0.05
rs79074615 chr12:40753013 LRRK2 C - 13 T vs. C 0.033 (T) - <1 (-) 0 (-) >0.05
rs2638253 chr12:40558790 LRRK2 [-31756bp] C - 12 T vs. C 0.267 (C) 0.325 (T) <1 (-) 2 (-) >0.05
rs7308399 chr12:40560682 LRRK2 [-29864bp] C - 13 T vs. C 0.25 (C) - <1 (-) 0 (-) >0.05
rs76906555 chr12:40607931 LRRK2 C - 11 T vs. C - - >1 (-) 8 (-) >0.05
rs11564131 chr12:40612210 LRRK2 C - 11 A vs. G - - <1 (-) 0 (-) >0.05
rs2404580 chr12:40639561 LRRK2 C - 13 A vs. G 0.392 (A) 0.383 (G) <1 (-) 0 (-) >0.05
rs17443909 chr12:40707410 LRRK2 C - 5 T vs. C - - <1 (-) 31 (-) >0.05
rs2638247 chr12:40567647 LRRK2 [-22899bp] C - 13 A vs. G 0.242 (G) 0.342 (G) >1 (-) 9 (-) >0.05
rs145274030 chr12:40745213 LRRK2 C - 9 A vs. G - - <1 (-) 0 (-) >0.05
rs7973058 chr12:40708845 LRRK2 C - 13 A vs. T 0.375 (T) 0.308 (T) >1 (-) 26 (-) >0.05
rs11176155 chr12:40746455 LRRK2 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs141620147 chr12:40557342 LRRK2 [-33204bp] C - 6 A vs. G - - >1 (-) 0 (-) >0.05
rs11175958 chr12:40701388 LRRK2 C - 13 A vs. G 0.192 (A) 0.2 (A) >1 (-) 18 (-) >0.05
rs138873140 chr12:40620978 LRRK2 C - 11 T vs. G - - <1 (-) 0 (-) >0.05
rs77278789 chr12:40708659 LRRK2 C - 7 A vs. G 0.017 (A) 0.033 (A) >1 (-) 4 (-) >0.05
rs138185953 chr12:40577875 LRRK2 [-12671bp] C - 13 A vs. C - - >1 (-) 0 (-) >0.05
rs117165831 chr12:40679411 LRRK2 C - 3 A vs. G 0.017 (A) - <1 (-) 0 (-) >0.05
rs75028169 chr12:40606899 LRRK2 C - 11 A vs. C - - >1 (-) 0 (-) >0.05
rs28365206 chr12:40610389 LRRK2 C - 11 A vs. T - - >1 (-) 0 (-) >0.05
rs7971919 chr12:40754697 LRRK2 C - 13 A vs. G 0.133 (G) 0.342 (G) <1 (-) 0 (-) >0.05
rs149720743 chr12:40622565 LRRK2 C - 11 A vs. C - - <1 (-) 0 (-) >0.05
rs11564115 chr12:40630639 LRRK2 C - 13 T vs. G 0.033 (G) 0.342 (G) >1 (-) 0 (-) >0.05
rs12369765 chr12:40581331 LRRK2 [-9215bp] C - 13 A vs. T - - <1 (-) 35 (-) >0.05
rs7963086 chr12:40735169 LRRK2 C - 13 C vs. G 0.117 (G) 0.325 (G) >1 (-) 0 (-) >0.05
rs2131081 chr12:40586631 LRRK2 [-3915bp] C - 8 C vs. G - - >1 (-) 0 (-) >0.05
rs10506148 chr12:40632594 LRRK2 C - 13 A vs. G 0.033 (A) 0.342 (A) <1 (-) 0 (-) >0.05
rs7307310 chr12:40745181 LRRK2 C - 13 T vs. C 0.117 (T) 0.325 (T) <1 (-) 0 (-) >0.05
rs11175518 chr12:40580318 LRRK2 [-10228bp] C - 13 T vs. C 0.083 (C) 0.317 (C) <1 (-) 35 (-) >0.05
rs17465463 chr12:40574041 LRRK2 [-16505bp] C - 13 A vs. G 0.017 (G) - >1 (-) 0 (-) >0.05
rs1491930 chr12:40550060 LRRK2 [-40486bp] C - 13 A vs. T 0.275 (T) 0.333 (A) <1 (-) 0 (-) >0.05
rs1491924 chr12:40587930 LRRK2 [-2616bp] C - 13 T vs. C 0.075 (C) 0.317 (C) <1 (-) 36 (-) >0.05
rs11176421 chr12:40787679 MUC19 C - 13 C vs. G 0.275 (G) 0.467 (C) >1 (-) 41 (-) >0.05
rs11176030 chr12:40718453 LRRK2 C - 13 A vs. T 0.375 (T) 0.325 (T) >1 (-) 25 (-) >0.05
rs7955042 chr12:40773282 LRRK2 [+10195bp] C - 13 T vs. C 0.133 (C) 0.3 (C) >1 (-) 0 (-) >0.05
rs35124455 chr12:40695791 LRRK2 C - 13 T vs. G - - >1 (-) 16 (-) >0.05
rs73107684 chr12:40554973 LRRK2 [-35573bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs1388593 chr12:40607566 LRRK2 C - 13 A vs. G 0.117 (A) 0.333 (A) >1 (-) 15 (-) >0.05
rs10878409 chr12:40746509 LRRK2 C - 13 T vs. G - - >1 (-) 0 (-) >0.05
rs11176154 chr12:40745902 LRRK2 C - 13 C vs. G 0.275 (C) 0.233 (C) <1 (-) 25 (-) >0.05

Association studies for this region [+]