LRRK2, chr12:40590546-40763087 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs76904798 chr12:40614434 LRRK2 All: C 120,238 21 T vs. C 0.158 (T) - 1.16 (1.11-1.20) 0 (0-47) 4.86e-14
Meta_image?name=rs76904798

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs11175401 chr12:40556601 LRRK2 [-33945bp] C - 13 T vs. C 0.075 (C) 0.317 (C) <1 (-) 36 (-) >0.05
rs77920884 chr12:40601308 LRRK2 C - 3 A vs. G 0.008 (A) - >1 (-) 0 (-) >0.05
rs12367542 chr12:40726647 LRRK2 C - 13 A vs. T 0.375 (T) 0.308 (T) >1 (-) 29 (-) >0.05
rs2098963 chr12:40780270 MUC19 [-6927bp] C - 13 A vs. G 0.192 (A) 0.117 (A) >1 (-) 0 (-) >0.05
rs2708476 chr12:40557795 LRRK2 [-32751bp] C - 13 C vs. G 0.425 (C) 0.333 (G) >1 (-) 0 (-) >0.05
rs5017705 chr12:40747772 LRRK2 C - 13 C vs. G - - <1 (-) 0 (-) >0.05
rs10784509 chr12:40713200 LRRK2 C - 13 A vs. G 0.4 (G) 0.433 (A) >1 (-) 10 (-) >0.05
rs74883359 chr12:40623898 LRRK2 C - 3 A vs. G 0.017 (A) - >1 (-) 0 (-) >0.05
rs10748040 chr12:40748547 LRRK2 C - 13 A vs. G 0.133 (A) 0.342 (A) >1 (-) 0 (-) >0.05
rs890575 chr12:40748395 LRRK2 C - 13 A vs. G 0.133 (G) 0.342 (G) <1 (-) 0 (-) >0.05
rs1896254 chr12:40713560 LRRK2 C - 13 T vs. G 0.375 (T) 0.433 (G) <1 (-) 13 (-) >0.05
rs1602577 chr12:40585233 LRRK2 [-5313bp] C - 13 A vs. G 0.042 (A) 0.058 (A) >1 (-) 0 (-) >0.05
rs10784501 chr12:40703865 LRRK2 C - 13 A vs. G 0.375 (A) 0.45 (G) <1 (-) 16 (-) >0.05
rs17461429 chr12:40552895 LRRK2 [-37651bp] C - 13 T vs. C 0.1 (T) 0.317 (T) >1 (-) 37 (-) >0.05
rs1896252 chr12:40713759 LRRK2 C - 13 T vs. C 0.375 (T) 0.433 (C) <1 (-) 13 (-) >0.05
rs10784548 chr12:40762546 LRRK2 C - 13 T vs. C 0.3 (T) 0.425 (C) >1 (-) 40 (-) >0.05
rs1549562 chr12:40790940 MUC19 C - 13 A vs. T 0.117 (A) 0.275 (A) <1 (-) 0 (-) >0.05
rs1365770 chr12:40762303 LRRK2 C - 13 C vs. G 0.3 (G) 0.425 (C) <1 (-) 40 (-) >0.05
rs3886747 chr12:40761951 LRRK2 C - 13 T vs. C 0.3 (C) 0.425 (T) <1 (-) 40 (-) >0.05
rs4768237 chr12:40756687 LRRK2 C - 13 T vs. C 0.308 (T) 0.425 (C) >1 (-) 39 (-) >0.05
rs2172240 chr12:40604821 LRRK2 C - 13 A vs. C 0.092 (A) 0.3 (A) >1 (-) 15 (-) >0.05
rs138382676 chr12:40746729 LRRK2 C - 13 C vs. G - - <1 (-) 16 (-) >0.05
rs11831092 chr12:40780701 MUC19 [-6496bp] C - 13 A vs. C 0.192 (A) 0.117 (A) >1 (-) 0 (-) >0.05
rs11564181 chr12:40673539 LRRK2 C - 13 A vs. T 0.033 (A) - >1 (-) 0 (-) >0.05
rs149331112 chr12:40674634 LRRK2 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs17466605 chr12:40759980 LRRK2 C - 13 A vs. G 0.3 (A) 0.425 (G) >1 (-) 39 (-) >0.05
rs721711 chr12:40709328 LRRK2 C - 13 A vs. G 0.383 (G) 0.433 (A) >1 (-) 14 (-) >0.05
rs721712 chr12:40709318 LRRK2 C - 13 A vs. G 0.375 (G) 0.433 (A) >1 (-) 14 (-) >0.05
rs10784528 chr12:40751979 LRRK2 C - 13 T vs. C 0.117 (T) 0.325 (T) <1 (-) 0 (-) >0.05
rs4767972 chr12:40732123 LRRK2 C - 13 T vs. C 0.133 (C) 0.342 (C) <1 (-) 0 (-) >0.05
rs1822606 chr12:40789318 MUC19 C - 13 A vs. G 0.108 (A) 0.283 (A) <1 (-) 0 (-) >0.05
rs1365765 chr12:40741821 LRRK2 C - 13 A vs. G 0.15 (A) 0.342 (A) >1 (-) 0 (-) >0.05
rs3789328 chr12:40761007 LRRK2 C - 13 A vs. G 0.333 (A) 0.425 (G) >1 (-) 38 (-) >0.05
rs7968048 chr12:40763973 LRRK2 [+886bp] C - 13 C vs. G 0.308 (C) 0.425 (G) >1 (-) 40 (-) >0.05
rs3761863 chr12:40758652 LRRK2 C - 13 T vs. C 0.3 (T) 0.425 (C) >1 (-) 39 (-) >0.05
rs1427271 chr12:40732394 LRRK2 C - 13 T vs. C 0.133 (T) 0.342 (T) >1 (-) 0 (-) >0.05
rs2896975 chr12:40706375 LRRK2 C - 13 T vs. G 0.308 (G) 0.442 (T) <1 (-) 0 (-) >0.05
rs10878368 chr12:40714785 LRRK2 C - 12 A vs. T 0.375 (A) 0.433 (T) <1 (-) 22 (-) >0.05
rs7307276 chr12:40715013 LRRK2 C - 12 A vs. T 0.383 (T) 0.433 (A) >1 (-) 22 (-) >0.05
rs17484141 chr12:40634474 LRRK2 C - 11 A vs. C - - >1 (-) 0 (-) >0.05
rs1427272 chr12:40732480 LRRK2 C - 13 C vs. G 0.133 (G) 0.342 (G) <1 (-) 0 (-) >0.05
rs2114568 chr12:40712620 LRRK2 C - 12 A vs. G 0.375 (G) 0.433 (A) >1 (-) 21 (-) >0.05
rs2114569 chr12:40712575 LRRK2 C - 12 A vs. C 0.375 (A) 0.433 (C) <1 (-) 21 (-) >0.05
rs2046932 chr12:40580440 LRRK2 [-10106bp] C - 13 A vs. G 0.067 (A) 0.025 (A) >1 (-) 0 (-) >0.05
rs7134408 chr12:40757533 LRRK2 C - 13 A vs. G 0.3 (A) 0.425 (G) >1 (-) 39 (-) >0.05
rs73106354 chr12:40643071 LRRK2 C - 13 A vs. G 0.017 (G) - >1 (-) 8 (-) >0.05
rs11176013 chr12:40713873 LRRK2 C - 13 A vs. G 0.392 (A) 0.433 (G) <1 (-) 8 (-) >0.05
rs10735931 chr12:40714501 LRRK2 C - 13 T vs. G 0.383 (T) 0.433 (G) <1 (-) 10 (-) >0.05
rs1427259 chr12:40786987 MUC19 [-210bp] C - 13 A vs. G 0.108 (A) 0.283 (A) <1 (-) 0 (-) >0.05
rs140745175 chr12:40593012 LRRK2 C - 13 T vs. C - - <1 (-) 0 (-) >0.05

Association studies for this region [+]