LRRK2, chr12:40590546-40763087 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs76904798 chr12:40614434 LRRK2 All: C 120,238 21 T vs. C 0.158 (T) - 1.16 (1.11-1.20) 0 (0-47) 4.86e-14
Meta_image?name=rs76904798

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs7311247 chr12:40745914 LRRK2 C - 13 T vs. C 0.125 (T) 0.342 (T) >1 (-) 0 (-) >0.05
rs7137437 chr12:40745955 LRRK2 C - 13 T vs. C 0.125 (C) 0.35 (C) <1 (-) 0 (-) >0.05
rs150818927 chr12:40630974 LRRK2 C - 3 A vs. C - - <1 (-) 0 (-) >0.05
rs919175 chr12:40736405 LRRK2 C - 13 T vs. C 0.133 (C) 0.342 (C) <1 (-) 0 (-) >0.05
rs150939831 chr12:40719478 LRRK2 C - 3 C vs. G - - <1 (-) 0 (-) >0.05
rs7954061 chr12:40736010 LRRK2 C - 13 A vs. G 0.142 (A) 0.342 (A) >1 (-) 0 (-) >0.05
rs17444737 chr12:40807749 MUC19 C - 13 T vs. C 0.075 (T) 0.025 (T) <1 (-) 0 (-) >0.05
rs4113953 chr12:40767990 LRRK2 [+4903bp] C - 13 C vs. G 0.3 (G) 0.425 (C) <1 (-) 42 (-) >0.05
rs7963697 chr12:40734916 LRRK2 C - 12 A vs. C 0.133 (C) 0.342 (C) <1 (-) 0 (-) >0.05
rs76434788 chr12:40684692 LRRK2 C - 13 A vs. G 0.05 (G) - <1 (-) 30 (-) >0.05
rs3922212 chr12:40770342 LRRK2 [+7255bp] C - 13 A vs. G 0.308 (A) 0.117 (A) <1 (-) 0 (-) >0.05
rs7956787 chr12:40735764 LRRK2 C - 12 T vs. C 0.133 (T) 0.342 (T) >1 (-) 0 (-) >0.05
rs7302503 chr12:40706531 LRRK2 C - 13 A vs. G 0.308 (G) 0.442 (A) <1 (-) 0 (-) >0.05
rs7957057 chr12:40690706 LRRK2 C - 13 A vs. C 0.292 (C) 0.45 (A) >1 (-) 6 (-) >0.05
rs12423551 chr12:40672594 LRRK2 C - 10 A vs. G - 0.025 (G) <1 (-) 0 (-) >0.05
rs10878538 chr12:40805948 MUC19 C - 13 C vs. G 0.125 (C) 0.192 (C) <1 (-) 21 (-) >0.05
rs2404832 chr12:40722452 LRRK2 C - 13 A vs. G 0.317 (G) 0.133 (G) <1 (-) 20 (-) >0.05
rs10784452 chr12:40649975 LRRK2 C - 13 A vs. G 0.208 (A) 0.208 (A) <1 (-) 27 (-) >0.05
rs147922178 chr12:40590585 LRRK2 C - 10 A vs. G - - <1 (-) 0 (-) >0.05
rs11176303 chr12:40769918 LRRK2 [+6831bp] C - 13 A vs. G 0.283 (A) 0.1 (A) <1 (-) 0 (-) >0.05
rs117256087 chr12:40591385 LRRK2 C - 10 T vs. C 0.008 (C) - >1 (-) 0 (-) >0.05
rs10784498 chr12:40697434 LRRK2 C - 13 A vs. G 0.317 (A) 0.158 (A) >1 (-) 21 (-) >0.05
rs7957905 chr12:40779292 MUC19 [-7905bp] C - 13 A vs. C - - <1 (-) 0 (-) >0.05
rs78703257 chr12:40805209 MUC19 C - 13 A vs. G 0.075 (A) 0.025 (A) <1 (-) 0 (-) >0.05
rs73102733 chr12:40683136 LRRK2 C - 13 A vs. G - - >1 (-) 46 (-) >0.05
rs146848916 chr12:40812294 MUC19 C - 3 T vs. G - - >1 (-) 0 (-) >0.05
rs117496566 chr12:40698650 LRRK2 C - 12 T vs. G 0.008 (G) - >1 (-) 0 (-) >0.05
rs80033042 chr12:40801167 MUC19 C - 13 T vs. C 0.075 (T) - <1 (-) 0 (-) >0.05
rs7137665 chr12:40716015 LRRK2 C - 13 T vs. C 0.308 (C) 0.442 (T) <1 (-) 0 (-) >0.05
rs12311273 chr12:40741617 LRRK2 C - 13 T vs. C - - <1 (-) 3 (-) >0.05
rs78851502 chr12:40811944 MUC19 C - 13 T vs. C 0.075 (T) - <1 (-) 0 (-) >0.05
rs11176330 chr12:40772543 LRRK2 [+9456bp] C - 13 A vs. G 0.192 (A) 0.1 (A) >1 (-) 0 (-) >0.05
rs10506150 chr12:40666760 LRRK2 C - 13 A vs. T 0.142 (T) 0.05 (T) >1 (-) 0 (-) >0.05
rs17444299 chr12:40767031 LRRK2 [+3944bp] C - 3 A vs. G 0.058 (A) - <1 (-) 0 (-) >0.05
rs1444221 chr12:40769062 LRRK2 [+5975bp] C - 13 A vs. T 0.3 (A) 0.425 (T) >1 (-) 40 (-) >0.05
rs10784486 chr12:40677029 LRRK2 C - 13 A vs. C 0.292 (A) 0.45 (C) <1 (-) 10 (-) >0.05
rs17461692 chr12:40658416 LRRK2 C - 11 A vs. C - - >1 (-) 0 (-) >0.05
rs4310676 chr12:40679871 LRRK2 C - 13 A vs. G 0.292 (A) 0.45 (G) <1 (-) 7 (-) >0.05
rs17444474 chr12:40781862 MUC19 [-5335bp] C - 3 A vs. G 0.058 (A) - <1 (-) 0 (-) >0.05
rs7979341 chr12:40675608 LRRK2 C - 13 A vs. G 0.292 (A) 0.417 (G) <1 (-) 9 (-) >0.05
rs10878180 chr12:40560741 LRRK2 [-29805bp] C - 13 T vs. G 0.175 (T) 0.308 (T) >1 (-) 0 (-) >0.05
rs35069108 chr12:40791701 MUC19 C - 6 T vs. C - - >1 (-) 0 (-) >0.05
rs2131088 chr12:40629554 LRRK2 C - 12 A vs. T 0.083 (T) 0.342 (T) >1 (-) 0 (-) >0.05
rs7968721 chr12:40787385 MUC19 C - 13 A vs. C 0.292 (C) 0.467 (A) <1 (-) 54 (-) >0.05
rs17444145 chr12:40725880 LRRK2 C - 13 T vs. C 0.158 (T) 0.2 (T) <1 (-) 3 (-) >0.05
rs7310390 chr12:40786103 MUC19 [-1094bp] C - 13 T vs. C 0.3 (T) 0.467 (C) >1 (-) 54 (-) >0.05
rs137941755 chr12:40562266 LRRK2 [-28280bp] C - 3 A vs. C - - >1 (-) 34 (-) >0.05
rs7135650 chr12:40786102 MUC19 [-1095bp] C - 13 A vs. G 0.292 (G) 0.467 (A) <1 (-) 54 (-) >0.05
rs7954300 chr12:40786719 MUC19 [-478bp] C - 13 A vs. G 0.292 (A) 0.467 (G) >1 (-) 55 (-) >0.05
rs11176143 chr12:40742363 LRRK2 C - 13 A vs. G 0.142 (A) 0.05 (A) <1 (-) 0 (-) >0.05

Association studies for this region [+]