LRRK2, chr12:40590546-40763087 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs76904798 chr12:40614434 LRRK2 All: C 120,238 21 T vs. C 0.158 (T) - 1.16 (1.11-1.20) 0 (0-47) 4.86e-14
Meta_image?name=rs76904798

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs7975124 chr12:40786215 MUC19 [-982bp] C - 13 T vs. C 0.292 (T) 0.467 (C) >1 (-) 55 (-) >0.05
rs2081701 chr12:40784672 MUC19 [-2525bp] C - 13 T vs. C 0.292 (C) 0.467 (T) <1 (-) 55 (-) >0.05
rs12314982 chr12:40784508 MUC19 [-2689bp] C - 13 A vs. G 0.292 (A) 0.492 (A) >1 (-) 55 (-) >0.05
rs140447285 chr12:40782114 MUC19 [-5083bp] C - 3 T vs. C - - <1 (-) 49 (-) >0.05
rs4280068 chr12:40785533 MUC19 [-1664bp] C - 13 T vs. C 0.292 (T) 0.467 (C) >1 (-) 54 (-) >0.05
rs7954318 chr12:40786765 MUC19 [-432bp] C - 13 A vs. G 0.3 (A) 0.467 (G) >1 (-) 55 (-) >0.05
rs7308193 chr12:40665227 LRRK2 C - 13 C vs. G 0.3 (G) 0.442 (C) >1 (-) 9 (-) >0.05
rs10878405 chr12:40742254 LRRK2 C - 13 A vs. G 0.392 (A) 0.317 (A) >1 (-) 8 (-) >0.05
rs2896982 chr12:40785508 MUC19 [-1689bp] C - 13 T vs. C 0.3 (C) 0.467 (T) <1 (-) 55 (-) >0.05
rs149979405 chr12:40780396 MUC19 [-6801bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs4351885 chr12:40785515 MUC19 [-1682bp] C - 13 T vs. G 0.292 (G) 0.467 (T) <1 (-) 55 (-) >0.05
rs11176341 chr12:40773776 LRRK2 [+10689bp] C - 13 T vs. C 0.308 (T) 0.05 (T) <1 (-) 0 (-) >0.05
rs141283405 chr12:40569666 LRRK2 [-20880bp] C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs721709 chr12:40709413 LRRK2 C - 13 A vs. T 0.308 (T) 0.442 (A) <1 (-) 0 (-) >0.05
rs4483664 chr12:40687654 LRRK2 C - 13 A vs. G 0.292 (A) 0.458 (G) <1 (-) 4 (-) >0.05
rs1427267 chr12:40708892 LRRK2 C - 13 T vs. C 0.308 (T) 0.442 (C) >1 (-) 0 (-) >0.05
rs7488873 chr12:40674594 LRRK2 C - 13 T vs. C - - <1 (-) 12 (-) >0.05
rs1427263 chr12:40713834 LRRK2 C - 13 A vs. C 0.317 (C) 0.433 (A) <1 (-) 0 (-) >0.05
rs10878377 chr12:40720004 LRRK2 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs11564113 chr12:40657868 LRRK2 C - 13 A vs. C 0.033 (C) - <1 (-) 0 (-) >0.05
rs7966132 chr12:40583885 LRRK2 [-6661bp] C - 10 A vs. T 0.1 (T) 0.15 (T) <1 (-) 0 (-) >0.05
rs7302841 chr12:40729655 LRRK2 C - 13 A vs. G 0.4 (A) 0.267 (A) >1 (-) 17 (-) >0.05
chr12:40701744 chr12:40701744 LRRK2 C - 4 T vs. C - - >1 (-) 0 (-) >0.05
rs11835105 chr12:40758045 LRRK2 C - 13 T vs. G 0.225 (G) 0.1 (G) <1 (-) 0 (-) >0.05
rs11176418 chr12:40786752 MUC19 [-445bp] C - 13 A vs. G 0.167 (A) 0.217 (A) <1 (-) 58 (-) >0.05
rs11176423 chr12:40788406 MUC19 C - 13 A vs. T 0.167 (A) 0.233 (A) <1 (-) 58 (-) >0.05
rs1072087 chr12:40789040 MUC19 C - 13 A vs. C 0.167 (C) 0.233 (C) >1 (-) 58 (-) >0.05
rs963243 chr12:40725778 LRRK2 C - 13 A vs. G 0.308 (G) 0.433 (A) <1 (-) 0 (-) >0.05
rs2201142 chr12:40607225 LRRK2 C - 13 A vs. T 0.258 (A) 0.208 (A) <1 (-) 0 (-) >0.05
rs7134379 chr12:40644874 LRRK2 C - 13 T vs. C 0.233 (T) 0.183 (T) <1 (-) 13 (-) >0.05
rs10784522 chr12:40740365 LRRK2 C - 13 T vs. G 0.383 (T) 0.3 (T) >1 (-) 10 (-) >0.05
rs146794882 chr12:40658053 LRRK2 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs144582444 chr12:40808535 MUC19 C - 5 T vs. C - - <1 (-) 0 (-) >0.05
rs10878249 chr12:40633314 LRRK2 C - 13 T vs. C 0.417 (C) 0.358 (C) >1 (-) 0 (-) >0.05
rs7311850 chr12:40783722 MUC19 [-3475bp] C - 13 C vs. G 0.167 (C) 0.233 (C) <1 (-) 58 (-) >0.05
rs10878258 chr12:40641692 LRRK2 C - 13 A vs. G 0.233 (G) 0.208 (G) >1 (-) 14 (-) >0.05
rs78044369 chr12:40737790 LRRK2 C - 5 T vs. C 0.025 (C) - <1 (-) 0 (-) >0.05
rs7969112 chr12:40583826 LRRK2 [-6720bp] C - 13 T vs. C 0.158 (C) 0.275 (C) >1 (-) 0 (-) >0.05
rs7957611 chr12:40779073 MUC19 [-8124bp] C - 13 T vs. C 0.058 (C) 0.0 (C) <1 (-) 0 (-) >0.05
rs2708488 chr12:40562372 LRRK2 [-28174bp] C - 13 C vs. G - 0.317 (G) <1 (-) 0 (-) >0.05
rs142198180 chr12:40692505 LRRK2 C - 9 T vs. C - - >1 (-) 36 (-) >0.05
rs17462139 chr12:40777958 MUC19 [-9239bp] C - 13 A vs. G 0.033 (A) 0.008 (A) <1 (-) 29 (-) >0.05
rs2638251 chr12:40564232 LRRK2 [-26314bp] C - 13 A vs. G 0.425 (G) 0.317 (A) >1 (-) 0 (-) >0.05
rs116859512 chr12:40615376 LRRK2 C - 10 T vs. G 0.025 (T) - <1 (-) 34 (-) >0.05
rs142152465 chr12:40648250 LRRK2 C - 9 A vs. T - - >1 (-) 26 (-) >0.05
rs2201143 chr12:40554659 LRRK2 [-35887bp] C - 13 A vs. G 0.442 (G) 0.325 (A) >1 (-) 0 (-) >0.05
rs2220677 chr12:40554724 LRRK2 [-35822bp] C - 13 A vs. C - - >1 (-) 0 (-) >0.05
rs1491929 chr12:40553687 LRRK2 [-36859bp] C - 13 A vs. C 0.417 (C) 0.308 (A) >1 (-) 0 (-) >0.05
rs2708472 chr12:40556163 LRRK2 [-34383bp] C - 13 T vs. C 0.425 (T) 0.333 (C) <1 (-) 0 (-) >0.05
rs17466360 chr12:40713219 LRRK2 C - 13 T vs. C 0.025 (T) - >1 (-) 0 (-) >0.05

Association studies for this region [+]