LRRK2, chr12:40590546-40763087 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs76904798 chr12:40614434 LRRK2 All: C 120,238 21 T vs. C 0.158 (T) - 1.16 (1.11-1.20) 0 (0-47) 4.86e-14
Meta_image?name=rs76904798

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs17444223 chr12:40759595 LRRK2 C - 13 A vs. G 0.183 (A) 0.217 (A) >1 (-) 52 (-) >0.05
rs72644819 chr12:40571093 LRRK2 [-19453bp] C - 13 T vs. C 0.058 (T) 0.325 (T) >1 (-) 14 (-) >0.05
rs17443670 chr12:40669869 LRRK2 C - 13 A vs. T 0.05 (A) - >1 (-) 23 (-) >0.05
rs2404577 chr12:40577719 LRRK2 [-12827bp] C - 13 T vs. C 0.175 (C) 0.325 (C) >1 (-) 0 (-) >0.05
rs144462285 chr12:40778799 MUC19 [-8398bp] C - 4 A vs. G - - <1 (-) 0 (-) >0.05
rs11176362 chr12:40776221 MUC19 [-10976bp] C - 13 C vs. G 0.308 (C) 0.117 (C) <1 (-) 0 (-) >0.05
rs143274631 chr12:40773290 LRRK2 [+10203bp] C - 9 T vs. C - - >1 (-) 35 (-) >0.05
rs2638259 chr12:40550324 LRRK2 [-40222bp] C - 13 A vs. G 0.425 (G) 0.325 (A) >1 (-) 0 (-) >0.05
rs117673709 chr12:40663563 LRRK2 C - 6 A vs. G 0.008 (G) - <1 (-) 0 (-) >0.05
rs10878341 chr12:40697477 LRRK2 C - 12 T vs. C 0.308 (T) 0.133 (T) >1 (-) 27 (-) >0.05
rs11612806 chr12:40573341 LRRK2 [-17205bp] C - 13 A vs. G 0.167 (A) 0.342 (A) <1 (-) 0 (-) >0.05
rs4768245 chr12:40777247 MUC19 [-9950bp] C - 13 A vs. G 0.308 (A) 0.125 (A) <1 (-) 0 (-) >0.05
rs12426362 chr12:40759848 LRRK2 C - 12 A vs. T 0.308 (T) 0.425 (A) <1 (-) 35 (-) >0.05
rs2201144 chr12:40610863 LRRK2 C - 13 T vs. C 0.075 (C) 0.35 (C) >1 (-) 0 (-) >0.05
rs10878496 chr12:40778957 MUC19 [-8240bp] C - 12 A vs. C 0.3 (A) 0.125 (A) >1 (-) 0 (-) >0.05
rs1907634 chr12:40614320 LRRK2 C - 13 A vs. G 0.075 (A) 0.333 (A) <1 (-) 0 (-) >0.05
rs2708436 chr12:40614746 LRRK2 C - 13 A vs. G 0.075 (A) 0.333 (A) <1 (-) 0 (-) >0.05
rs2708437 chr12:40614779 LRRK2 C - 13 T vs. C 0.075 (T) 0.333 (T) <1 (-) 0 (-) >0.05
rs2708467 chr12:40554892 LRRK2 [-35654bp] C - 13 T vs. C 0.425 (C) 0.317 (T) >1 (-) 0 (-) >0.05
rs6581578 chr12:40568539 LRRK2 [-22007bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs10878162 chr12:40546736 LRRK2 [-43810bp] C - 13 A vs. G 0.175 (A) 0.35 (A) <1 (-) 0 (-) >0.05
rs143123822 chr12:40770363 LRRK2 [+7276bp] C - 4 C vs. G - - <1 (-) 0 (-) >0.05
rs10878413 chr12:40746960 LRRK2 C - 13 T vs. C - - >1 (-) 19 (-) >0.05
rs11831981 chr12:40777697 MUC19 [-9500bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs10878174 chr12:40557682 LRRK2 [-32864bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs12423567 chr12:40777316 MUC19 [-9881bp] C - 13 T vs. G 0.317 (G) 0.125 (G) >1 (-) 0 (-) >0.05
rs1820545 chr12:40810593 MUC19 C - 13 T vs. C 0.375 (C) 0.458 (T) <1 (-) 28 (-) >0.05
rs17444605 chr12:40787912 MUC19 C - 13 A vs. G 0.342 (A) 0.342 (A) >1 (-) 28 (-) >0.05
rs1966787 chr12:40779611 MUC19 [-7586bp] C - 13 C vs. G - - >1 (-) 0 (-) >0.05
rs11176386 chr12:40780504 MUC19 [-6693bp] C - 13 A vs. G 0.167 (A) 0.242 (A) <1 (-) 54 (-) >0.05
rs118075840 chr12:40603676 LRRK2 C - 13 T vs. G 0.033 (T) - >1 (-) 0 (-) >0.05
rs11176406 chr12:40784334 MUC19 [-2863bp] C - 13 A vs. T 0.017 (A) - <1 (-) 19 (-) >0.05
rs1463720 chr12:40543121 SLC2A13 [+43230bp] C - 13 T vs. C 0.442 (C) 0.325 (T) >1 (-) 0 (-) >0.05
rs2307016 chr12:40561348 LRRK2 [-29198bp] C - 13 C vs. G 0.167 (G) 0.333 (G) >1 (-) 0 (-) >0.05
rs11175836 chr12:40670676 LRRK2 C - 13 T vs. C 0.367 (T) 0.325 (T) <1 (-) 28 (-) >0.05
rs11176402 chr12:40783374 MUC19 [-3823bp] C - 13 T vs. C 0.3 (T) 0.125 (T) <1 (-) 0 (-) >0.05
rs1388596 chr12:40640626 LRRK2 C - 12 A vs. G 0.075 (G) 0.325 (G) <1 (-) 0 (-) >0.05
rs1352877 chr12:40626378 LRRK2 C - 13 A vs. T 0.042 (T) - <1 (-) 0 (-) >0.05
rs7976715 chr12:40749150 LRRK2 C - 13 A vs. G 0.417 (G) 0.425 (A) >1 (-) 0 (-) >0.05
chr12:40802128 chr12:40802128 MUC19 C - 4 T vs. C - - >1 (-) 0 (-) >0.05
rs2708465 chr12:40553223 LRRK2 [-37323bp] C - 13 T vs. G 0.267 (T) 0.342 (T) <1 (-) 15 (-) >0.05
rs10878284 chr12:40658205 LRRK2 C - 13 A vs. G - - >1 (-) 22 (-) >0.05
rs2098964 chr12:40780304 MUC19 [-6893bp] C - 13 A vs. T 0.308 (A) 0.075 (A) <1 (-) 0 (-) >0.05
rs2708438 chr12:40615432 LRRK2 C - 13 A vs. G 0.075 (G) 0.325 (G) >1 (-) 0 (-) >0.05
rs150622547 chr12:40715760 LRRK2 C - 3 A vs. G - - <1 (-) 0 (-) >0.05
rs1491939 chr12:40645596 LRRK2 C - 13 A vs. G 0.075 (G) 0.317 (G) >1 (-) 0 (-) >0.05
rs2404839 chr12:40781658 MUC19 [-5539bp] C - 13 T vs. C 0.308 (C) 0.125 (C) >1 (-) 0 (-) >0.05
rs12367475 chr12:40776756 MUC19 [-10441bp] C - 13 A vs. G - - >1 (-) 19 (-) >0.05
rs1834744 chr12:40781083 MUC19 [-6114bp] C - 13 A vs. C 0.308 (A) 0.125 (A) <1 (-) 0 (-) >0.05
rs7312118 chr12:40780400 MUC19 [-6797bp] C - 13 A vs. C - - >1 (-) 23 (-) >0.05

Association studies for this region [+]