LSM7, chr19:2321516-2328619 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region
Append your own data and create meta-analysis

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs62120679 chr19:2363319 TMPRSS9 [-26450bp] All: C 99,286 13 T vs. C 0.292 (T) 0.3 (C) 1.14 (1.09-1.19) 47 (0-72) 2.52e-09
Meta_image?name=rs62120679

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs112960796 chr19:2336610 LSM7 [+7991bp] C - 10 T vs. C 0.158 (T) - >1 (-) 33 (-) >0.05
rs4807232 chr19:2335334 LSM7 [+6715bp] C - 11 A vs. C - - >1 (-) 13 (-) >0.05
rs55710409 chr19:2337408 LSM7 [+8789bp] C - 10 T vs. C 0.158 (T) - >1 (-) 33 (-) >0.05
rs58488302 chr19:2358509 LSM7 [+29890bp] C - 10 A vs. C 0.175 (C) - <1 (-) 19 (-) >0.05
rs11668542 chr19:2335349 LSM7 [+6730bp] C - 10 A vs. C - - >1 (-) 30 (-) >0.05
rs8106339 chr19:2329914 LSM7 [+1295bp] C - 5 T vs. C 0.033 (T) 0.225 (T) >1 (-) 37 (-) >0.05
rs75833880 chr19:2353347 LSM7 [+24728bp] C - 8 T vs. C 0.008 (T) - >1 (-) 0 (-) >0.05
rs148510092 chr19:2366771 TMPRSS9 [-22998bp] C - 12 T vs. C - - >1 (-) 5 (-) >0.05
rs12462821 chr19:2352077 LSM7 [+23458bp] C - 12 T vs. C 0.042 (T) 0.0 (T) >1 (-) 8 (-) >0.05
rs75373605 chr19:2376005 TMPRSS9 [-13764bp] C - 4 T vs. G - - <1 (-) 0 (-) >0.05
rs10424233 chr19:2353736 LSM7 [+25117bp] C - 12 A vs. G 0.042 (A) 0.008 (A) >1 (-) 8 (-) >0.05
rs3210 chr19:2341674 LSM7 [+13055bp] C - 10 C vs. G 0.167 (C) - >1 (-) 31 (-) >0.05
rs116770326 chr19:2343010 LSM7 [+14391bp] C - 10 A vs. T 0.15 (A) - >1 (-) 31 (-) >0.05
rs145574677 chr19:2377263 TMPRSS9 [-12506bp] C - 11 A vs. G - - >1 (-) 3 (-) >0.05
rs28475301 chr19:2355357 LSM7 [+26738bp] C - 12 T vs. C 0.05 (T) 0.0 (T) >1 (-) 7 (-) >0.05
rs8106153 chr19:2343844 LSM7 [+15225bp] C - 12 A vs. G 0.033 (A) 0.0 (A) >1 (-) 7 (-) >0.05
rs7246088 chr19:2341209 LSM7 [+12590bp] C - 10 T vs. C 0.158 (C) - <1 (-) 31 (-) >0.05
rs10445607 chr19:2339693 LSM7 [+11074bp] C - 12 A vs. G 0.017 (A) 0.025 (A) >1 (-) 8 (-) >0.05
rs1609752 chr19:2339958 LSM7 [+11339bp] C - 12 T vs. C 0.05 (T) 0.017 (T) >1 (-) 8 (-) >0.05
rs75230609 chr19:2303576 LINGO3 C - 5 A vs. G 0.058 (G) 0.208 (G) <1 (-) 55 (-) >0.05
rs7245824 chr19:2341060 LSM7 [+12441bp] C - 12 T vs. C 0.05 (T) 0.0 (T) >1 (-) 8 (-) >0.05
rs1609754 chr19:2340736 LSM7 [+12117bp] C - 12 T vs. C 0.008 (T) 0.042 (T) >1 (-) 8 (-) >0.05
rs77336580 chr19:2359172 LSM7 [+30553bp] C - 10 T vs. C 0.15 (T) - >1 (-) 35 (-) >0.05
rs76434007 chr19:2341488 LSM7 [+12869bp] C - 10 A vs. T 0.15 (A) - >1 (-) 33 (-) >0.05
rs76652283 chr19:2303567 LINGO3 C - 5 T vs. C 0.058 (T) 0.2 (T) >1 (-) 55 (-) >0.05
rs17852546 chr19:2344034 LSM7 [+15415bp] C - 10 A vs. C 0.158 (A) - >1 (-) 27 (-) >0.05
rs112477431 chr19:2304938 LINGO3 C - 5 T vs. C - - <1 (-) 55 (-) >0.05
rs758094 chr19:2337920 LSM7 [+9301bp] C - 11 T vs. C 0.033 (T) 0.017 (T) >1 (-) 18 (-) >0.05
rs59964741 chr19:2303911 LINGO3 C - 5 T vs. C 0.05 (C) 0.2 (C) <1 (-) 55 (-) >0.05
rs79980491 chr19:2343498 LSM7 [+14879bp] C - 10 A vs. G 0.158 (A) - >1 (-) 29 (-) >0.05
rs55690659 chr19:2345820 LSM7 [+17201bp] C - 10 T vs. C - - <1 (-) 0 (-) >0.05
rs7253785 chr19:2304093 LINGO3 C - 5 T vs. C 0.05 (C) 0.192 (C) <1 (-) 55 (-) >0.05
rs77670399 chr19:2377985 TMPRSS9 [-11784bp] C - 11 A vs. G - 0.025 (G) <1 (-) 2 (-) >0.05
rs73919616 chr19:2371065 TMPRSS9 [-18704bp] C - 11 T vs. C 0.008 (T) 0.025 (T) >1 (-) 0 (-) >0.05
rs142464753 chr19:2325386 LSM7 C - 5 T vs. C - - <1 (-) 0 (-) >0.05
rs11881121 chr19:2339513 LSM7 [+10894bp] C - 11 T vs. C 0.275 (C) 0.067 (C) >1 (-) 28 (-) >0.05
rs2385176 chr19:2371516 TMPRSS9 [-18253bp] C - 11 T vs. C 0.033 (T) - >1 (-) 0 (-) >0.05
rs75504785 chr19:2346378 LSM7 [+17759bp] C - 10 T vs. C 0.158 (T) - >1 (-) 28 (-) >0.05
rs117916448 chr19:2368737 TMPRSS9 [-21032bp] C - 12 C vs. G 0.042 (C) - >1 (-) 2 (-) >0.05
rs112620940 chr19:2378105 TMPRSS9 [-11664bp] C - 11 T vs. C - - <1 (-) 3 (-) >0.05
rs73518468 chr19:2300419 LINGO3 C - 5 A vs. T 0.033 (A) 0.2 (A) >1 (-) 52 (-) >0.05
rs115087573 chr19:2357589 LSM7 [+28970bp] C - 9 A vs. C - - <1 (-) 0 (-) >0.05
rs111466490 chr19:2355774 LSM7 [+27155bp] C - 10 T vs. C 0.158 (C) - <1 (-) 33 (-) >0.05
rs142913635 chr19:2378455 TMPRSS9 [-11314bp] C - 11 T vs. C - - <1 (-) 1 (-) >0.05
rs117433666 chr19:2377801 TMPRSS9 [-11968bp] C - 11 T vs. C - 0.025 (C) <1 (-) 1 (-) >0.05
rs113104795 chr19:2377967 TMPRSS9 [-11802bp] C - 11 T vs. C - 0.05 (T) >1 (-) 1 (-) >0.05
rs73919639 chr19:2376748 TMPRSS9 [-13021bp] C - 11 T vs. C - - <1 (-) 1 (-) >0.05
rs73919638 chr19:2376746 TMPRSS9 [-13023bp] C - 11 T vs. C - - <1 (-) 1 (-) >0.05
rs78431187 chr19:2377087 TMPRSS9 [-12682bp] C - 11 T vs. C 0.042 (T) 0.033 (T) >1 (-) 1 (-) >0.05
rs73919642 chr19:2377027 TMPRSS9 [-12742bp] C - 11 T vs. C - 0.042 (C) <1 (-) 1 (-) >0.05

Association studies for this region [+]