MALSU1, chr7:23338358-23351348 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs199347 chr7:23293746 GPNMB All: C 120,238 21 G vs. A 0.392 (G) 0.325 (G) 0.90 (0.87-0.92) 11 (0-46) 5.62e-14
Meta_image?name=rs199347

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs6461705 chr7:23360749 IGF2BP3 C - 13 T vs. C - - <1 (-) 0 (-) <1.00e-04
rs55633349 chr7:23317121 GPNMB [+2394bp] All: C 108,990 15 G vs. A 0.108 (G) - 0.90 (0.85-0.95) 38 (0-66) 1.49e-04
rs156414 chr7:23357321 IGF2BP3 C - 13 T vs. C 0.408 (T) 0.342 (T) >1 (-) 0 (-) <0.05
rs77253147 chr7:23314062 GPNMB C - 13 C vs. G 0.075 (G) - >1 (-) 42 (-) <0.05
rs116889372 chr7:23340328 MALSU1 C - 13 T vs. C 0.017 (T) - <1 (-) 0 (-) <0.05
rs10488282 chr7:23383135 IGF2BP3 C - 13 T vs. C 0.175 (C) 0.033 (C) >1 (-) 47 (-) <0.05
rs3807462 chr7:23384498 IGF2BP3 C - 13 C vs. G 0.183 (G) 0.1 (G) >1 (-) 53 (-) <0.05
rs74437133 chr7:23334792 MALSU1 [-3566bp] C - 13 A vs. G 0.058 (A) - <1 (-) 43 (-) <0.05
rs117416732 chr7:23345366 MALSU1 C - 6 A vs. T 0.025 (T) - <1 (-) 42 (-) <0.05
rs34323745 chr7:23312068 GPNMB C - 13 A vs. C 0.183 (A) 0.042 (A) >1 (-) 8 (-) <0.05
rs74452222 chr7:23385251 IGF2BP3 C - 10 A vs. G 0.033 (A) - >1 (-) 41 (-) <0.05
rs13225706 chr7:23317917 GPNMB [+3190bp] C - 13 A vs. G - - >1 (-) 17 (-) <0.05
rs12700423 chr7:23388969 IGF2BP3 C - 13 C vs. G 0.175 (C) 0.033 (C) >1 (-) 0 (-) <0.05
rs274062 chr7:23395986 IGF2BP3 C - 13 C vs. G 0.408 (C) 0.467 (C) >1 (-) 0 (-) <0.05
rs12700422 chr7:23385112 IGF2BP3 C - 13 A vs. G 0.175 (G) 0.017 (G) <1 (-) 0 (-) <0.05
rs145260264 chr7:23337776 MALSU1 [-582bp] C - 10 T vs. C - - >1 (-) 34 (-) <0.05
rs113137390 chr7:23331027 MALSU1 [-7331bp] C - 10 T vs. C - - >1 (-) 34 (-) <0.05
rs3087888 chr7:23351080 MALSU1 C - 11 C vs. G 0.058 (G) - <1 (-) 0 (-) <0.05
rs141693932 chr7:23365574 IGF2BP3 C - 10 A vs. G - - <1 (-) 0 (-) <0.05
rs35487638 chr7:23342798 MALSU1 C - 13 A vs. G 0.183 (G) 0.058 (G) <1 (-) 0 (-) <0.05
rs62468198 chr7:23382980 IGF2BP3 C - 13 A vs. G 0.058 (A) - >1 (-) 0 (-) <0.05
rs77340587 chr7:23387110 IGF2BP3 C - 11 A vs. G 0.05 (G) - <1 (-) 0 (-) <0.05
rs80003387 chr7:23347880 MALSU1 C - 10 A vs. G 0.05 (A) - >1 (-) 0 (-) <0.05
rs17796841 chr7:23353514 IGF2BP3 C - 10 T vs. C 0.05 (C) - <1 (-) 0 (-) <0.05
rs199659 chr7:23330202 MALSU1 [-8156bp] C - 13 A vs. T 0.142 (A) 0.25 (A) >1 (-) 22 (-) >0.05
rs113784234 chr7:23391460 IGF2BP3 C - 8 T vs. C - - >1 (-) 0 (-) >0.05
rs199356 chr7:23288550 GPNMB C - 11 A vs. G - - <1 (-) 0 (-) >0.05
rs151301371 chr7:23381022 IGF2BP3 C - 5 T vs. C - - >1 (-) 0 (-) >0.05
rs117525978 chr7:23330428 MALSU1 [-7930bp] C - 8 A vs. T 0.017 (T) - <1 (-) 0 (-) >0.05
rs3757449 chr7:23308906 GPNMB C - 10 C vs. G - - <1 (-) 0 (-) >0.05
rs2268741 chr7:23351557 IGF2BP3 C - 9 A vs. G - - >1 (-) 0 (-) >0.05
rs2061677 chr7:23392724 IGF2BP3 C - 8 T vs. C 0.017 (T) - <1 (-) 0 (-) >0.05
rs141072360 chr7:23346463 MALSU1 C - 7 C vs. G - - >1 (-) 0 (-) >0.05
rs2268748 chr7:23313171 GPNMB C - 8 T vs. C 0.017 (C) 0.342 (C) <1 (-) 0 (-) >0.05
rs116921120 chr7:23323194 GPNMB [+8467bp] C - 8 A vs. G 0.017 (A) - >1 (-) 0 (-) >0.05
rs143704568 chr7:23323415 GPNMB [+8688bp] C - 8 A vs. G - - <1 (-) 0 (-) >0.05
rs71526005 chr7:23382504 IGF2BP3 C - 13 T vs. C 0.125 (C) 0.008 (C) <1 (-) 0 (-) >0.05
rs117219133 chr7:23394890 IGF2BP3 C - 12 A vs. G 0.075 (A) - <1 (-) 0 (-) >0.05
rs142655389 chr7:23394992 IGF2BP3 C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs75523457 chr7:23307408 GPNMB C - 10 A vs. G 0.017 (A) - <1 (-) 0 (-) >0.05
rs274052 chr7:23389033 IGF2BP3 C - 12 T vs. C - 0.008 (C) >1 (-) 0 (-) >0.05
rs117263884 chr7:23399965 IGF2BP3 C - 8 A vs. G - 0.033 (G) <1 (-) 10 (-) >0.05
rs1783 chr7:23297588 GPNMB C - 13 A vs. T 0.025 (A) - <1 (-) 0 (-) >0.05
rs156418 chr7:23354413 IGF2BP3 C - 13 A vs. G 0.008 (A) 0.175 (A) <1 (-) 0 (-) >0.05
rs117151817 chr7:23358880 IGF2BP3 C - 13 T vs. G 0.017 (T) - <1 (-) 0 (-) >0.05
rs156411 chr7:23359853 IGF2BP3 C - 13 A vs. G 0.008 (G) - >1 (-) 0 (-) >0.05
rs156416 chr7:23356036 IGF2BP3 C - 13 C vs. G - - <1 (-) 0 (-) >0.05
rs156417 chr7:23354481 IGF2BP3 C - 13 A vs. G 0.008 (A) 0.167 (A) <1 (-) 0 (-) >0.05
rs138673631 chr7:23356187 IGF2BP3 C - 8 A vs. G - - >1 (-) 0 (-) >0.05
rs17797041 chr7:23372404 IGF2BP3 C - 13 T vs. C 0.125 (T) 0.008 (T) >1 (-) 11 (-) >0.05

Association studies for this region [+]