MALSU1, chr7:23338358-23351348 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs199347 chr7:23293746 GPNMB All: C 120,238 21 G vs. A 0.392 (G) 0.325 (G) 0.90 (0.87-0.92) 11 (0-46) 5.62e-14
Meta_image?name=rs199347

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs17797011 chr7:23369342 IGF2BP3 C - 13 C vs. G 0.125 (C) - >1 (-) 11 (-) >0.05
rs459704 chr7:23335168 MALSU1 [-3190bp] C - 13 C vs. G 0.008 (G) 0.15 (G) >1 (-) 0 (-) >0.05
rs113996538 chr7:23351161 MALSU1 C - 13 T vs. C - 0.017 (T) <1 (-) 0 (-) >0.05
rs199350 chr7:23300450 GPNMB C - 13 T vs. G 0.025 (T) - <1 (-) 0 (-) >0.05
rs199352 chr7:23299071 GPNMB C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs467440 chr7:23360425 IGF2BP3 C - 13 C vs. G - - <1 (-) 0 (-) >0.05
rs199346 chr7:23293772 GPNMB C - 13 C vs. G 0.025 (G) - >1 (-) 0 (-) >0.05
rs146045411 chr7:23370652 IGF2BP3 C - 13 A vs. T - - >1 (-) 0 (-) >0.05
rs114623230 chr7:23361705 IGF2BP3 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs156410 chr7:23349440 MALSU1 C - 13 C vs. G - 0.142 (G) >1 (-) 0 (-) >0.05
rs156428 chr7:23306500 GPNMB C - 13 T vs. C 0.025 (T) 0.017 (T) <1 (-) 0 (-) >0.05
rs156427 chr7:23307143 GPNMB C - 13 A vs. G 0.025 (A) 0.017 (A) <1 (-) 0 (-) >0.05
rs143855864 chr7:23321521 GPNMB [+6794bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs199354 chr7:23296572 GPNMB C - 13 T vs. C 0.025 (T) - <1 (-) 0 (-) >0.05
rs156426 chr7:23307475 GPNMB C - 13 T vs. C 0.025 (C) - >1 (-) 0 (-) >0.05
rs166664 chr7:23345883 MALSU1 C - 13 T vs. C - 0.15 (T) <1 (-) 0 (-) >0.05
rs156424 chr7:23310017 GPNMB C - 13 A vs. C 0.025 (A) - <1 (-) 0 (-) >0.05
rs78150344 chr7:23328968 MALSU1 [-9390bp] C - 13 A vs. G - 0.15 (G) >1 (-) 0 (-) >0.05
rs78294387 chr7:23328983 MALSU1 [-9375bp] C - 13 A vs. C - 0.017 (A) <1 (-) 0 (-) >0.05
rs156422 chr7:23310550 GPNMB C - 13 A vs. C 0.025 (A) 0.017 (A) <1 (-) 0 (-) >0.05
rs1637247 chr7:23303087 GPNMB C - 13 T vs. C 0.033 (T) - <1 (-) 0 (-) >0.05
rs456866 chr7:23335603 MALSU1 [-2755bp] C - 13 A vs. C 0.008 (C) 0.15 (C) >1 (-) 0 (-) >0.05
rs464428 chr7:23334475 MALSU1 [-3883bp] C - 13 A vs. G - 0.15 (G) >1 (-) 0 (-) >0.05
rs461239 chr7:23334438 MALSU1 [-3920bp] C - 13 T vs. C - 0.15 (T) <1 (-) 0 (-) >0.05
rs464452 chr7:23334413 MALSU1 [-3945bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs199349 chr7:23302588 GPNMB C - 13 A vs. G 0.025 (G) - >1 (-) 0 (-) >0.05
rs586508 chr7:23367192 IGF2BP3 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs156423 chr7:23310149 GPNMB C - 13 A vs. G 0.025 (G) - >1 (-) 0 (-) >0.05
rs461344 chr7:23334236 MALSU1 [-4122bp] C - 13 C vs. G - 0.15 (G) >1 (-) 0 (-) >0.05
rs35686290 chr7:23318669 GPNMB [+3942bp] C - 11 C vs. G 0.108 (G) - <1 (-) 19 (-) >0.05
rs467459 chr7:23331208 MALSU1 [-7150bp] C - 13 T vs. C 0.008 (T) 0.133 (T) <1 (-) 0 (-) >0.05
rs11983775 chr7:23400423 IGF2BP3 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs114236186 chr7:23380462 IGF2BP3 C - 13 A vs. C - 0.033 (T) <1 (-) 0 (-) >0.05
rs274046 chr7:23383639 IGF2BP3 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs156409 chr7:23348396 MALSU1 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs399051 chr7:23376665 IGF2BP3 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs156415 chr7:23357154 IGF2BP3 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs274047 chr7:23383697 IGF2BP3 C - 13 A vs. G 0.008 (A) 0.017 (A) <1 (-) 0 (-) >0.05
rs199360 chr7:23360174 IGF2BP3 C - 13 T vs. C - 0.017 (T) <1 (-) 0 (-) >0.05
rs192439 chr7:23347733 MALSU1 C - 13 C vs. G 0.008 (C) 0.008 (C) <1 (-) 0 (-) >0.05
rs156413 chr7:23357637 IGF2BP3 C - 13 C vs. G - - <1 (-) 0 (-) >0.05
rs6950139 chr7:23345410 MALSU1 C - 13 C vs. G 0.008 (C) - <1 (-) 0 (-) >0.05
rs14114 chr7:23314194 GPNMB C - 13 A vs. C 0.025 (C) 0.017 (C) >1 (-) 0 (-) >0.05
rs274066 chr7:23399833 IGF2BP3 C - 13 A vs. G 0.008 (A) - <1 (-) 0 (-) >0.05
rs156408 chr7:23316252 GPNMB [+1525bp] C - 13 C vs. G 0.025 (G) - >1 (-) 0 (-) >0.05
rs166662 chr7:23315803 GPNMB [+1076bp] C - 13 C vs. G 0.025 (G) - >1 (-) 0 (-) >0.05
rs274048 chr7:23384125 IGF2BP3 C - 13 A vs. C - - >1 (-) 0 (-) >0.05
rs274065 chr7:23399581 IGF2BP3 C - 13 A vs. C - 0.058 (C) >1 (-) 0 (-) >0.05
rs2529003 chr7:23320911 GPNMB [+6184bp] C - 13 T vs. C 0.017 (C) - >1 (-) 0 (-) >0.05
rs274064 chr7:23398061 IGF2BP3 C - 13 A vs. G - 0.017 (G) >1 (-) 0 (-) >0.05

Association studies for this region [+]