MAP3K19, chr2:135722061-135805038 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs7570971 chr2:135837906 RAB3GAP1 All: C 108,544 14 A vs. C 0.267 (A) - 0.89 (0.86-0.93) 22 (0-58) 2.33e-09
Meta_image?name=rs7570971

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs4954212 chr2:135780168 MAP3K19 All: C 108,990 15 G vs. A 0.125 (G) 0.217 (G) 0.88 (0.84-0.93) 0 (0-50) 4.93e-07
rs11889843 chr2:135781522 MAP3K19 All: C 108,990 15 A vs. G 0.117 (A) 0.217 (A) 0.88 (0.84-0.93) 0 (0-52) 5.07e-07
rs12328663 chr2:135832131 RAB3GAP1 All: C 108,990 15 C vs. T 0.117 (C) 0.175 (C) 0.88 (0.84-0.93) 0 (0-46) 5.33e-07
rs11892750 chr2:135783367 MAP3K19 All: C 108,990 15 A vs. G 0.117 (A) 0.217 (A) 0.86 (0.82-0.92) 0 (0-46) 5.56e-07
rs11889089 chr2:135783366 MAP3K19 All: C 108,990 15 C vs. T 0.117 (C) 0.217 (C) 0.86 (0.82-0.92) 0 (0-46) 5.67e-07
rs4640444 chr2:135773617 MAP3K19 All: C 108,990 15 C vs. T 0.125 (C) 0.217 (C) 0.89 (0.84-0.93) 0 (0-52) 6.39e-07
rs61663334 chr2:135776430 MAP3K19 All: C 108,990 15 G vs. A 0.133 (G) 0.217 (G) 0.88 (0.84-0.93) 0 (0-51) 7.25e-07
rs11903663 chr2:135774681 MAP3K19 All: C 108,990 15 G vs. A 0.125 (G) 0.217 (G) 0.88 (0.84-0.93) 0 (0-51) 7.33e-07
rs4346445 chr2:135773446 MAP3K19 All: C 108,990 15 C vs. A 0.1 (C) 0.217 (C) 0.87 (0.82-0.92) 13 (0-51) 8.58e-07
rs56271357 chr2:135720715 MAP3K19 [-1346bp] All: C 108,990 15 T vs. C 0.383 (T) 0.075 (C) 0.92 (0.89-0.95) 26 (0-60) 1.09e-06
rs62168897 chr2:135717997 CCNT2 [+1085bp] All: C 108,990 15 T vs. C 0.383 (T) 0.058 (C) 0.92 (0.89-0.95) 27 (0-61) 1.16e-06
rs3814355 chr2:135711516 CCNT2 All: C 108,990 15 T vs. C 0.383 (T) 0.075 (C) 0.92 (0.89-0.95) 28 (0-61) 1.22e-06
rs4954213 chr2:135784227 MAP3K19 All: C 108,990 15 T vs. G 0.117 (T) 0.217 (T) 0.88 (0.84-0.93) 0 (0-51) 1.25e-06
rs10166142 chr2:135710322 CCNT2 All: C 108,990 15 G vs. A 0.383 (G) 0.075 (A) 0.92 (0.89-0.95) 28 (0-61) 1.28e-06
rs3769023 chr2:135713703 CCNT2 All: C 108,990 15 A vs. G 0.383 (A) 0.075 (G) 0.92 (0.89-0.95) 28 (0-61) 1.29e-06
rs3814354 chr2:135711657 CCNT2 All: C 108,990 15 A vs. G 0.383 (A) 0.075 (G) 0.92 (0.89-0.95) 28 (0-61) 1.29e-06
rs10187990 chr2:135697557 CCNT2 All: C 108,990 15 G vs. A 0.383 (G) 0.075 (A) 0.92 (0.89-0.95) 29 (0-62) 1.44e-06
rs1947112 chr2:135715957 CCNT2 All: C 108,990 15 G vs. A 0.383 (G) 0.075 (A) 0.92 (0.89-0.95) 28 (0-61) 1.48e-06
rs1374289 chr2:135694379 CCNT2 All: C 108,990 15 T vs. C 0.383 (T) 0.058 (C) 0.92 (0.89-0.95) 29 (0-62) 1.49e-06
rs4953938 chr2:135694848 CCNT2 All: C 108,990 15 A vs. G 0.383 (A) 0.075 (G) 0.92 (0.89-0.95) 30 (0-62) 1.49e-06
rs1592 chr2:135722143 MAP3K19 All: C 108,990 15 C vs. A 0.383 (C) 0.383 (A) 0.92 (0.89-0.95) 29 (0-62) 1.64e-06
rs6733547 chr2:135758231 MAP3K19 All: C 108,990 15 T vs. G 0.117 (T) 0.217 (T) 0.89 (0.84-0.93) 0 (0-53) 1.79e-06
rs62168891 chr2:135672187 CCNT2 [-3618bp] All: C 108,990 15 T vs. C 0.383 (T) 0.075 (C) 0.92 (0.89-0.95) 25 (0-59) 2.10e-06
rs4494812 chr2:135773420 MAP3K19 All: C 108,990 15 A vs. G - - 1.14 (1.08-1.21) 17 (0-54) 2.19e-06
rs7593284 chr2:135778708 MAP3K19 All: C 108,990 15 T vs. C 0.083 (T) 0.217 (T) 0.88 (0.83-0.93) 0 (0-46) 3.88e-06
rs13408997 chr2:135779588 MAP3K19 All: C 108,990 15 A vs. G 0.05 (A) 0.217 (A) 0.88 (0.83-0.93) 0 (0-45) 3.89e-06
rs7565149 chr2:135801956 MAP3K19 C - 13 A vs. T 0.117 (A) - <1 (-) 0 (-) <1.00e-04
rs13402101 chr2:135785066 MAP3K19 C - 13 A vs. T 0.1 (A) 0.217 (A) <1 (-) 0 (-) <1.00e-04
rs72976313 chr2:135766890 MAP3K19 All: C 108,990 15 A vs. G 0.083 (A) 0.217 (A) 0.88 (0.84-0.93) 0 (0-50) 8.67e-06
rs10187402 chr2:135771974 MAP3K19 C - 13 C vs. G 0.158 (G) 0.342 (C) >1 (-) 20 (-) <1.00e-04
rs16831264 chr2:135787148 MAP3K19 C - 13 C vs. G 0.125 (C) 0.217 (C) <1 (-) 0 (-) <1.00e-04
rs7597802 chr2:135781301 MAP3K19 C - 13 A vs. T 0.117 (T) 0.217 (T) >1 (-) 0 (-) <1.00e-04
rs7563997 chr2:135780587 MAP3K19 C - 13 A vs. T 0.117 (A) 0.217 (A) <1 (-) 0 (-) <1.00e-04
rs4645053 chr2:135773692 MAP3K19 C - 13 A vs. T 0.117 (A) 0.217 (A) <1 (-) 2 (-) <1.00e-04
rs11888521 chr2:135775049 MAP3K19 C - 13 C vs. G 0.125 (C) 0.217 (C) <1 (-) 3 (-) <1.00e-04
rs4953945 chr2:135766072 MAP3K19 C - 13 C vs. G 0.125 (G) 0.217 (G) >1 (-) 6 (-) <1.00e-04
rs11895609 chr2:135758520 MAP3K19 C - 13 A vs. T 0.117 (T) 0.217 (T) >1 (-) 5 (-) <1.00e-04
rs57180797 chr2:135800085 MAP3K19 All: C 108,990 15 A vs. G - - 1.16 (1.08-1.25) 0 (0-15) 3.78e-05
rs7565871 chr2:135778656 MAP3K19 C - 13 C vs. G 0.117 (C) 0.217 (C) <1 (-) 7 (-) <1.00e-04
rs4482542 chr2:135773449 MAP3K19 All: C 108,990 15 A vs. G 0.075 (A) 0.183 (A) 0.86 (0.80-0.93) 3 (0-55) 9.55e-05
rs79939165 chr2:135796302 MAP3K19 All: C 108,990 15 C vs. T - - 1.13 (1.06-1.20) 0 (0-54) 9.57e-05
rs16831256 chr2:135781035 MAP3K19 All: C 108,990 15 T vs. C 0.083 (T) 0.183 (T) 0.89 (0.84-0.94) 0 (0-54) 1.20e-04
rs77922444 chr2:135772049 MAP3K19 All: C 108,990 15 T vs. C 0.075 (T) 0.183 (T) 0.89 (0.84-0.95) 2 (0-55) 1.70e-04
rs6705067 chr2:135691191 CCNT2 C - 12 A vs. G 0.233 (A) 0.483 (G) <1 (-) 0 (-) <0.05
rs6728452 chr2:135839805 RAB3GAP1 C - 13 T vs. C 0.075 (T) 0.15 (T) <1 (-) 0 (-) <0.05
rs12463645 chr2:135674370 CCNT2 [-1435bp] C - 13 T vs. C 0.317 (C) 0.483 (T) >1 (-) 40 (-) <0.05
rs73959247 chr2:135809572 RAB3GAP1 [-263bp] C - 13 T vs. G 0.083 (G) 0.183 (G) >1 (-) 0 (-) <0.05
rs57855091 chr2:135823042 RAB3GAP1 C - 13 C vs. G 0.075 (G) 0.183 (G) >1 (-) 0 (-) <0.05
rs16831315 chr2:135825074 RAB3GAP1 C - 13 T vs. C 0.083 (C) 0.183 (C) >1 (-) 0 (-) <0.05
rs57194235 chr2:135812974 RAB3GAP1 C - 13 A vs. C 0.083 (C) 0.183 (C) >1 (-) 0 (-) <0.05

Association studies for this region [+]