MAPT, chr17:43971748-44105700 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs17649553 chr17:43994648 MAPT All: C 114,483 20 T vs. C 0.217 (T) - 0.77 (0.75-0.80) 0 (0-37) 6.11e-49
Meta_image?name=rs17649553

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs17769490 chr17:43925605 SPPL2C [+1167bp] C - 12 A vs. G 0.225 (A) - <1 (-) 0 (-) <5.00e-08
rs55975673 chr17:43959113 MAPT [-12635bp] C - 12 A vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs2006305 chr17:43959752 MAPT [-11996bp] C - 12 A vs. T - - >1 (-) 0 (-) <5.00e-08
rs17650633 chr17:44030231 MAPT C - 12 T vs. C 0.2 (C) - >1 (-) 0 (-) <5.00e-08
rs17650651 chr17:44030311 MAPT C - 12 T vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs62054818 chr17:43926056 SPPL2C [+1618bp] C - 12 A vs. C 0.225 (C) - >1 (-) 0 (-) <5.00e-08
rs62056773 chr17:43969833 MAPT [-1915bp] C - 12 A vs. G - - >1 (-) 0 (-) <5.00e-08
rs112425426 chr17:43963416 MAPT [-8332bp] C - 12 C vs. G - - >1 (-) 0 (-) <5.00e-08
rs62054817 chr17:43925966 SPPL2C [+1528bp] C - 12 A vs. G 0.225 (A) - <1 (-) 0 (-) <5.00e-08
rs55721252 chr17:43958099 MAPT [-13649bp] C - 12 T vs. C - - >1 (-) 0 (-) <5.00e-08
rs55996632 chr17:43935888 SPPL2C [+11450bp] C - 12 T vs. C 0.217 (T) - <1 (-) 0 (-) <5.00e-08
rs62062293 chr17:44100553 MAPT C - 12 A vs. C 0.2 (A) - <1 (-) 0 (-) <5.00e-08
rs77063768 chr17:43925729 SPPL2C [+1291bp] C - 12 A vs. G 0.208 (G) - >1 (-) 0 (-) <5.00e-08
rs62054833 chr17:43933673 SPPL2C [+9235bp] C - 12 T vs. C 0.217 (C) - >1 (-) 0 (-) <5.00e-08
rs62061732 chr17:44017941 MAPT C - 12 T vs. G 0.217 (T) - <1 (-) 0 (-) <5.00e-08
rs62063677 chr17:44129885 KANSL1 C - 12 T vs. C - - <1 (-) 0 (-) <5.00e-08
rs62062297 chr17:44101004 MAPT C - 12 A vs. G - - >1 (-) 0 (-) <5.00e-08
rs77129180 chr17:43963046 MAPT [-8702bp] C - 12 A vs. G 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs62062799 chr17:44027521 MAPT C - 12 T vs. G 0.217 (T) - <1 (-) 0 (-) <5.00e-08
rs62062768 chr17:44019479 MAPT C - 12 C vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs76839282 chr17:44029178 MAPT C - 12 C vs. G 0.2 (C) - <1 (-) 0 (-) <5.00e-08
rs62054832 chr17:43933579 SPPL2C [+9141bp] C - 12 A vs. C 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs62062280 chr17:44093993 MAPT C - 12 T vs. C - - <1 (-) 0 (-) <5.00e-08
rs62062285 chr17:44095661 MAPT C - 12 T vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs62055559 chr17:43967138 MAPT [-4610bp] C - 12 T vs. G 0.208 (G) - >1 (-) 0 (-) <5.00e-08
rs62061729 chr17:44017283 MAPT C - 12 A vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs62062286 chr17:44096486 MAPT C - 12 T vs. C - - <1 (-) 0 (-) <5.00e-08
rs113395365 chr17:44025650 MAPT C - 12 T vs. C 0.2 (C) - >1 (-) 0 (-) <5.00e-08
rs77017444 chr17:44028796 MAPT C - 12 T vs. C 0.217 (C) - >1 (-) 0 (-) <5.00e-08
rs62055551 chr17:43965687 MAPT [-6061bp] C - 12 C vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs62055550 chr17:43965680 MAPT [-6068bp] C - 12 A vs. G 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs2316784 chr17:44021699 MAPT C - 12 T vs. G 0.217 (T) - <1 (-) 0 (-) <5.00e-08
rs4479290 chr17:44021744 MAPT C - 12 T vs. C 0.208 (C) - >1 (-) 0 (-) <5.00e-08
rs62062774 chr17:44021463 MAPT C - 12 T vs. C 0.217 (C) - >1 (-) 0 (-) <5.00e-08
rs16940799 chr17:44102933 MAPT C - 12 T vs. C 0.217 (C) - >1 (-) 0 (-) <5.00e-08
rs10445370 chr17:43935118 SPPL2C [+10680bp] C - 12 A vs. G 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs17650579 chr17:44030115 MAPT C - 12 T vs. C 0.217 (T) - <1 (-) 0 (-) <5.00e-08
rs10445334 chr17:43934826 SPPL2C [+10388bp] C - 12 T vs. G 0.225 (G) - >1 (-) 0 (-) <5.00e-08
rs10445335 chr17:43934896 SPPL2C [+10458bp] C - 12 A vs. T 0.225 (A) - <1 (-) 0 (-) <5.00e-08
rs17691508 chr17:43968463 MAPT [-3285bp] C - 12 C vs. G 0.208 (G) - >1 (-) 0 (-) <5.00e-08
rs80254317 chr17:43963282 MAPT [-8466bp] C - 12 C vs. G 0.2 (G) - >1 (-) 0 (-) <5.00e-08
rs79115768 chr17:44021061 MAPT C - 12 T vs. C 0.217 (T) - <1 (-) 0 (-) <5.00e-08
rs62054825 chr17:43930033 SPPL2C [+5595bp] C - 12 A vs. G 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs62062801 chr17:44028011 MAPT C - 12 T vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs62062800 chr17:44027753 MAPT C - 12 A vs. G 0.2 (G) - >1 (-) 0 (-) <5.00e-08
rs62062802 chr17:44028045 MAPT C - 12 T vs. G 0.217 (T) - <1 (-) 0 (-) <5.00e-08
rs56356641 chr17:43958362 MAPT [-13386bp] C - 12 T vs. G - - >1 (-) 0 (-) <5.00e-08
rs74903707 chr17:44028707 MAPT C - 12 A vs. G 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs17770120 chr17:43963943 MAPT [-7805bp] C - 12 A vs. C 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs62055547 chr17:43964755 MAPT [-6993bp] C - 12 T vs. C 0.208 (T) - <1 (-) 0 (-) <5.00e-08

Association studies for this region [+]