MAPT, chr17:43971748-44105700 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs17649553 chr17:43994648 MAPT All: C 114,483 20 T vs. C 0.217 (T) - 0.77 (0.75-0.80) 0 (0-37) 6.11e-49
Meta_image?name=rs17649553

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs62063676 chr17:44129800 KANSL1 C - 12 A vs. G - - <1 (-) 0 (-) <5.00e-08
rs62055554 chr17:43966260 MAPT [-5488bp] C - 12 A vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs62055553 chr17:43966178 MAPT [-5570bp] C - 12 A vs. C 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs10445368 chr17:43933171 SPPL2C [+8733bp] C - 12 T vs. C 0.2 (T) - <1 (-) 0 (-) <5.00e-08
rs74531363 chr17:44026495 MAPT C - 12 A vs. G 0.208 (G) - >1 (-) 0 (-) <5.00e-08
rs75839508 chr17:44022319 MAPT C - 12 A vs. G 0.208 (A) - <1 (-) 0 (-) <5.00e-08
rs78993847 chr17:43933834 SPPL2C [+9396bp] C - 12 T vs. G - - <1 (-) 0 (-) <5.00e-08
rs80209523 chr17:43933830 SPPL2C [+9392bp] C - 12 T vs. G 0.142 (T) - <1 (-) 0 (-) <5.00e-08
rs77426526 chr17:43962982 MAPT [-8766bp] C - 12 A vs. G 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs62055552 chr17:43965955 MAPT [-5793bp] C - 12 A vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs75686108 chr17:44022376 MAPT C - 12 T vs. C 0.2 (T) - <1 (-) 0 (-) <5.00e-08
rs62055558 chr17:43966955 MAPT [-4793bp] C - 12 A vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs62055518 chr17:43956505 MAPT [-15243bp] C - 12 A vs. C 0.158 (C) - >1 (-) 0 (-) <5.00e-08
rs62062773 chr17:44020545 MAPT C - 12 A vs. G - - >1 (-) 0 (-) <5.00e-08
rs78229689 chr17:44106806 KANSL1 [-476bp] C - 12 A vs. G 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs62062798 chr17:44027383 MAPT C - 12 A vs. G 0.208 (G) - >1 (-) 0 (-) <5.00e-08
rs62062797 chr17:44027366 MAPT C - 12 T vs. G 0.208 (G) - >1 (-) 0 (-) <5.00e-08
rs55726761 chr17:44099669 MAPT C - 12 A vs. G - - <1 (-) 0 (-) <5.00e-08
rs77266933 chr17:44026490 MAPT C - 12 A vs. C 0.208 (C) - >1 (-) 0 (-) <5.00e-08
rs62063678 chr17:44129949 KANSL1 C - 12 C vs. G 0.175 (G) - >1 (-) 0 (-) <5.00e-08
rs62062779 chr17:44022577 MAPT C - 12 A vs. C 0.2 (C) - >1 (-) 0 (-) <5.00e-08
rs55653657 chr17:43956778 MAPT [-14970bp] C - 12 A vs. G 0.2 (G) - >1 (-) 0 (-) <5.00e-08
rs55768605 chr17:43956734 MAPT [-15014bp] C - 12 A vs. C 0.208 (A) - <1 (-) 0 (-) <5.00e-08
rs62062778 chr17:44022528 MAPT C - 12 A vs. G 0.192 (G) - >1 (-) 0 (-) <5.00e-08
rs62062780 chr17:44022593 MAPT C - 12 T vs. C 0.2 (T) - <1 (-) 0 (-) <5.00e-08
rs62062790 chr17:44025045 MAPT C - 12 T vs. C 0.2 (T) - <1 (-) 0 (-) <5.00e-08
rs12150447 chr17:44128125 KANSL1 C - 12 A vs. C 0.217 (C) - >1 (-) 0 (-) <5.00e-08
rs17575423 chr17:44129253 KANSL1 C - 12 T vs. C 0.217 (C) - >1 (-) 0 (-) <5.00e-08
rs62062789 chr17:44025033 MAPT C - 12 T vs. C - - >1 (-) 0 (-) <5.00e-08
rs62062796 chr17:44027316 MAPT C - 12 A vs. G 0.208 (A) - <1 (-) 0 (-) <5.00e-08
rs62055556 chr17:43966749 MAPT [-4999bp] C - 12 T vs. C - - >1 (-) 0 (-) <5.00e-08
rs62055557 chr17:43966795 MAPT [-4953bp] C - 12 A vs. C 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs62062795 chr17:44027090 MAPT C - 12 T vs. C 0.208 (T) - <1 (-) 0 (-) <5.00e-08
rs78556223 chr17:44026478 MAPT C - 12 A vs. G 0.208 (G) - >1 (-) 0 (-) <5.00e-08
rs112674766 chr17:44130924 KANSL1 C - 12 A vs. T - - >1 (-) 0 (-) <5.00e-08
rs12150064 chr17:44128407 KANSL1 C - 12 A vs. C 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs1052590 chr17:44102638 MAPT C - 12 A vs. G 0.208 (G) - >1 (-) 0 (-) <5.00e-08
rs56364632 chr17:43956642 MAPT [-15106bp] C - 12 T vs. C 0.217 (C) - >1 (-) 0 (-) <5.00e-08
rs62062294 chr17:44100666 MAPT C - 12 A vs. C 0.217 (C) - >1 (-) 0 (-) <5.00e-08
rs55711631 chr17:43958431 MAPT [-13317bp] C - 12 T vs. C 0.217 (C) - >1 (-) 0 (-) <5.00e-08
rs17652520 chr17:44098967 MAPT C - 12 A vs. G 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs9468 chr17:44101563 MAPT C - 12 T vs. C 0.208 (C) - >1 (-) 0 (-) <5.00e-08
rs8712 chr17:44101871 MAPT C - 12 A vs. G 0.208 (G) - >1 (-) 0 (-) <5.00e-08
rs78026984 chr17:44025592 MAPT C - 12 C vs. G - - <1 (-) 0 (-) <5.00e-08
rs62062791 chr17:44025273 MAPT C - 12 A vs. G 0.2 (A) - <1 (-) 0 (-) <5.00e-08
rs62062133 chr17:44114372 KANSL1 C - 12 T vs. C 0.208 (C) - >1 (-) 0 (-) <5.00e-08
rs62062784 chr17:44024552 MAPT C - 12 C vs. G 0.2 (G) - >1 (-) 0 (-) <5.00e-08
rs62062803 chr17:44028183 MAPT C - 12 T vs. C 0.2 (C) - >1 (-) 0 (-) <5.00e-08
rs62062785 chr17:44024562 MAPT C - 12 T vs. G 0.2 (T) - <1 (-) 0 (-) <5.00e-08
rs62062271 chr17:44091988 MAPT C - 12 T vs. C - - >1 (-) 0 (-) <5.00e-08

Association studies for this region [+]