MAPT, chr17:43971748-44105700 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs17649553 chr17:43994648 MAPT All: C 114,483 20 T vs. C 0.217 (T) - 0.77 (0.75-0.80) 0 (0-37) 6.11e-49
Meta_image?name=rs17649553

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs62055529 chr17:43960020 MAPT [-11728bp] C - 12 A vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs55894109 chr17:43957221 MAPT [-14527bp] C - 12 T vs. C - - <1 (-) 0 (-) <5.00e-08
rs62055541 chr17:43962017 MAPT [-9731bp] C - 12 C vs. G 0.217 (C) - <1 (-) 0 (-) <5.00e-08
rs62055499 chr17:43953991 MAPT [-17757bp] C - 12 C vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs17770186 chr17:43964191 MAPT [-7557bp] C - 12 A vs. C 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs111941646 chr17:43966608 MAPT [-5140bp] C - 12 A vs. T 0.217 (T) - >1 (-) 0 (-) <5.00e-08
rs62055540 chr17:43961142 MAPT [-10606bp] C - 12 T vs. C 0.217 (C) - >1 (-) 0 (-) <5.00e-08
rs112746008 chr17:44126650 KANSL1 C - 12 T vs. C - - <1 (-) 0 (-) <5.00e-08
rs56301449 chr17:43960918 MAPT [-10830bp] C - 12 T vs. C 0.217 (C) - >1 (-) 0 (-) <5.00e-08
rs17770108 chr17:43961292 MAPT [-10456bp] C - 12 T vs. G 0.217 (T) - <1 (-) 0 (-) <5.00e-08
rs62055517 chr17:43956425 MAPT [-15323bp] C - 12 T vs. C - - <1 (-) 0 (-) <5.00e-08
rs58879558 chr17:44095467 MAPT C - 12 T vs. C - - >1 (-) 0 (-) <5.00e-08
rs62055539 chr17:43961044 MAPT [-10704bp] C - 12 A vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs55876817 chr17:43958139 MAPT [-13609bp] C - 12 A vs. C - - >1 (-) 0 (-) <5.00e-08
rs1076222 chr17:44109769 KANSL1 C - 12 C vs. G 0.208 (G) - >1 (-) 0 (-) <5.00e-08
rs62055545 chr17:43964561 MAPT [-7187bp] C - 12 T vs. C 0.217 (T) - <1 (-) 0 (-) <5.00e-08
rs62062769 chr17:44019643 MAPT C - 12 A vs. G 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs17770150 chr17:43964163 MAPT [-7585bp] C - 12 A vs. G 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs62055546 chr17:43964567 MAPT [-7181bp] C - 12 A vs. C 0.217 (C) - >1 (-) 0 (-) <5.00e-08
rs74977736 chr17:44126977 KANSL1 C - 12 C vs. G 0.217 (C) - <1 (-) 0 (-) <5.00e-08
rs62062783 chr17:44023520 MAPT C - 12 T vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs17574824 chr17:44115107 KANSL1 C - 12 T vs. C 0.217 (T) - <1 (-) 0 (-) <5.00e-08
rs62062794 chr17:44026394 MAPT C - 12 A vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs79765413 chr17:44022433 MAPT C - 12 T vs. C 0.2 (C) - >1 (-) 0 (-) <5.00e-08
rs55881134 chr17:44109248 KANSL1 C - 12 A vs. G 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs78834738 chr17:44022434 MAPT C - 12 A vs. G 0.208 (A) - <1 (-) 0 (-) <5.00e-08
rs111962225 chr17:43934016 SPPL2C [+9578bp] C - 12 C vs. G 0.217 (C) - <1 (-) 0 (-) <5.00e-08
rs62054840 chr17:43936812 SPPL2C [+12374bp] C - 12 A vs. G - - <1 (-) 0 (-) <5.00e-08
rs62062136 chr17:44116312 KANSL1 C - 12 T vs. C 0.217 (C) - >1 (-) 0 (-) <5.00e-08
rs1052594 chr17:44102689 MAPT C - 12 C vs. G 0.2 (C) - <1 (-) 0 (-) <5.00e-08
rs62054839 chr17:43936804 SPPL2C [+12366bp] C - 12 A vs. G - - >1 (-) 0 (-) <5.00e-08
rs62055542 chr17:43963844 MAPT [-7904bp] C - 12 T vs. C 0.217 (T) - <1 (-) 0 (-) <5.00e-08
rs56343551 chr17:43959092 MAPT [-12656bp] C - 12 T vs. G 0.217 (T) - <1 (-) 0 (-) <5.00e-08
rs62062793 chr17:44026321 MAPT C - 12 T vs. C 0.208 (C) - >1 (-) 0 (-) <5.00e-08
rs62062134 chr17:44114432 KANSL1 C - 12 A vs. C 0.217 (C) - >1 (-) 0 (-) <5.00e-08
rs17574040 chr17:44102865 MAPT C - 12 A vs. C 0.217 (C) - >1 (-) 0 (-) <5.00e-08
rs56127309 chr17:43960341 MAPT [-11407bp] C - 12 A vs. G 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs76563578 chr17:43933879 SPPL2C [+9441bp] C - 12 C vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs56338487 chr17:43960812 MAPT [-10936bp] C - 12 A vs. T 0.217 (T) - >1 (-) 0 (-) <5.00e-08
rs12150542 chr17:44115730 KANSL1 C - 12 A vs. G 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs56194412 chr17:43960600 MAPT [-11148bp] C - 12 T vs. C 0.217 (C) - >1 (-) 0 (-) <5.00e-08
rs62054834 chr17:43934314 SPPL2C [+9876bp] C - 12 T vs. C 0.217 (C) - >1 (-) 0 (-) <5.00e-08
rs79580365 chr17:43960172 MAPT [-11576bp] C - 12 T vs. C 0.217 (T) - <1 (-) 0 (-) <5.00e-08
rs2019822 chr17:43959918 MAPT [-11830bp] C - 12 A vs. T 0.2 (A) - <1 (-) 0 (-) <5.00e-08
rs1052587 chr17:44102604 MAPT C - 12 T vs. C 0.208 (C) - >1 (-) 0 (-) <5.00e-08
rs62063683 chr17:44131717 KANSL1 C - 12 A vs. G 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs17652748 chr17:44103616 MAPT C - 12 T vs. C 0.217 (T) - <1 (-) 0 (-) <5.00e-08
rs62063665 chr17:44122345 KANSL1 C - 12 A vs. G 0.208 (G) - >1 (-) 0 (-) <5.00e-08
rs62063666 chr17:44122348 KANSL1 C - 12 T vs. C 0.208 (T) - <1 (-) 0 (-) <5.00e-08
rs62063681 chr17:44131592 KANSL1 C - 12 A vs. G 0.208 (G) - >1 (-) 0 (-) <5.00e-08

Association studies for this region [+]