MAPT, chr17:43971748-44105700 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs17649553 chr17:43994648 MAPT All: C 114,483 20 T vs. C 0.217 (T) - 0.77 (0.75-0.80) 0 (0-37) 6.11e-49
Meta_image?name=rs17649553

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs34579536 chr17:44108906 KANSL1 C - 12 A vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs17574425 chr17:44109188 KANSL1 C - 12 C vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs62055516 chr17:43956390 MAPT [-15358bp] C - 12 T vs. C - - >1 (-) 0 (-) <5.00e-08
rs62055502 chr17:43954284 MAPT [-17464bp] C - 12 A vs. G 0.2 (A) - <1 (-) 0 (-) <5.00e-08
rs79252344 chr17:44120608 KANSL1 C - 12 A vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs62062321 chr17:44111109 KANSL1 C - 12 A vs. G 0.2 (G) - >1 (-) 0 (-) <5.00e-08
rs112333322 chr17:44126673 KANSL1 C - 12 A vs. G 0.208 (G) - >1 (-) 0 (-) <5.00e-08
rs62055501 chr17:43954227 MAPT [-17521bp] C - 12 A vs. G 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs62062788 chr17:44024906 MAPT C - 12 A vs. G - - >1 (-) 0 (-) <5.00e-08
rs2055794 chr17:43951717 MAPT [-20031bp] C - 12 A vs. G 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs62055500 chr17:43954134 MAPT [-17614bp] C - 12 A vs. G 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs17691328 chr17:43955487 MAPT [-16261bp] C - 12 T vs. C 0.208 (T) - <1 (-) 0 (-) <5.00e-08
rs55905252 chr17:43955365 MAPT [-16383bp] C - 12 A vs. C 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs4441322 chr17:43955030 MAPT [-16718bp] C - 12 A vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs62055498 chr17:43953814 MAPT [-17934bp] C - 12 A vs. G 0.242 (A) - <1 (-) 0 (-) <5.00e-08
rs74863825 chr17:43963120 MAPT [-8628bp] C - 12 T vs. C 0.217 (T) - <1 (-) 0 (-) <5.00e-08
rs55767267 chr17:43960325 MAPT [-11423bp] C - 12 T vs. C 0.208 (C) - >1 (-) 0 (-) <5.00e-08
rs62061734 chr17:44018488 MAPT C - 12 T vs. C 0.208 (C) - >1 (-) 0 (-) <5.00e-08
rs62063668 chr17:44122484 KANSL1 C - 12 T vs. C 0.2 (T) - <1 (-) 0 (-) <5.00e-08
rs62063671 chr17:44124837 KANSL1 C - 12 A vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs80348388 chr17:43952634 MAPT [-19114bp] C - 12 A vs. T 0.217 (T) - >1 (-) 0 (-) <5.00e-08
rs34043286 chr17:44117119 KANSL1 C - 12 A vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs62055493 chr17:43952944 MAPT [-18804bp] C - 12 T vs. C 0.217 (C) - >1 (-) 0 (-) <5.00e-08
rs112578465 chr17:44125066 KANSL1 C - 12 T vs. C 0.208 (T) - <1 (-) 0 (-) <5.00e-08
rs62062777 chr17:44022068 MAPT C - 12 A vs. G 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs62063667 chr17:44122354 KANSL1 C - 12 A vs. G 0.2 (G) - >1 (-) 0 (-) <5.00e-08
rs62063685 chr17:44132379 KANSL1 C - 12 A vs. G 0.192 (G) - >1 (-) 0 (-) <5.00e-08
rs17574604 chr17:44111613 KANSL1 C - 12 A vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs79065019 chr17:44124535 KANSL1 C - 12 T vs. C 0.208 (C) - >1 (-) 0 (-) <5.00e-08
rs739642 chr17:43946838 SPPL2C [+22400bp] C - 12 A vs. C 0.2 (A) - <1 (-) 0 (-) <5.00e-08
rs757055 chr17:43946875 SPPL2C [+22437bp] C - 12 T vs. C 0.217 (T) - <1 (-) 0 (-) <5.00e-08
rs62063686 chr17:44132458 KANSL1 C - 12 A vs. G - - <1 (-) 0 (-) <5.00e-08
rs74571696 chr17:44123685 KANSL1 C - 12 A vs. G 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs79698033 chr17:44123717 KANSL1 C - 12 T vs. C 0.217 (T) - <1 (-) 0 (-) <5.00e-08
rs12150570 chr17:44126218 KANSL1 C - 12 A vs. G 0.208 (A) - <1 (-) 0 (-) <5.00e-08
rs12150336 chr17:44125704 KANSL1 C - 12 T vs. C - - <1 (-) 0 (-) <5.00e-08
rs62062787 chr17:44024865 MAPT C - 12 T vs. C - - >1 (-) 0 (-) <5.00e-08
rs78681971 chr17:44106219 MAPT [+519bp] C - 12 T vs. C 0.2 (T) - <1 (-) 0 (-) <5.00e-08
rs79772576 chr17:44106220 MAPT [+520bp] C - 12 A vs. G 0.2 (G) - >1 (-) 0 (-) <5.00e-08
rs62055494 chr17:43953016 MAPT [-18732bp] C - 12 T vs. C - - <1 (-) 0 (-) <5.00e-08
rs62055491 chr17:43951120 MAPT [-20628bp] C - 12 T vs. C 0.217 (C) - >1 (-) 0 (-) <5.00e-08
rs62061733 chr17:44018399 MAPT C - 12 A vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs113434679 chr17:44126765 KANSL1 C - 12 A vs. C - - <1 (-) 0 (-) <5.00e-08
rs140713557 chr17:43953179 MAPT [-18569bp] C - 12 A vs. G - - >1 (-) 0 (-) <5.00e-08
rs62062137 chr17:44118848 KANSL1 C - 12 A vs. G 0.208 (A) - <1 (-) 0 (-) <5.00e-08
rs12150162 chr17:44114218 KANSL1 C - 12 T vs. C 0.217 (C) - >1 (-) 0 (-) <5.00e-08
rs2055796 chr17:43952191 MAPT [-19557bp] C - 12 A vs. T 0.2 (T) - >1 (-) 0 (-) <5.00e-08
rs10491140 chr17:43950976 MAPT [-20772bp] C - 12 T vs. G 0.217 (T) - <1 (-) 0 (-) <5.00e-08
rs2055795 chr17:43951995 MAPT [-19753bp] C - 12 T vs. C 0.217 (T) - <1 (-) 0 (-) <5.00e-08
rs111853996 chr17:44130878 KANSL1 C - 12 A vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08

Association studies for this region [+]