MAPT, chr17:43971748-44105700 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs17649553 chr17:43994648 MAPT All: C 114,483 20 T vs. C 0.217 (T) - 0.77 (0.75-0.80) 0 (0-37) 6.11e-49
Meta_image?name=rs17649553

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs77489223 chr17:43937736 SPPL2C [+13298bp] C - 12 T vs. C 0.217 (T) - <1 (-) 0 (-) <5.00e-08
rs62062322 chr17:44112385 KANSL1 C - 12 A vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs17653162 chr17:44111827 KANSL1 C - 12 A vs. C 0.208 (A) - <1 (-) 0 (-) <5.00e-08
rs62055492 chr17:43951345 MAPT [-20403bp] C - 12 A vs. C 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs111321973 chr17:43953170 MAPT [-18578bp] C - 12 T vs. C - - <1 (-) 0 (-) <5.00e-08
rs62054841 chr17:43937104 SPPL2C [+12666bp] C - 12 A vs. G 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs17653193 chr17:44112441 KANSL1 C - 12 A vs. G 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs17653255 chr17:44112743 KANSL1 C - 12 A vs. C 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs12185243 chr17:44115351 KANSL1 C - 12 T vs. C 0.217 (C) - >1 (-) 0 (-) <5.00e-08
rs76154201 chr17:44154033 KANSL1 C - 11 T vs. C 0.192 (C) - >1 (-) 0 (-) <5.00e-08
rs12150438 chr17:44113963 KANSL1 C - 12 T vs. C 0.208 (T) - <1 (-) 0 (-) <5.00e-08
rs2214258 chr17:43953719 MAPT [-18029bp] C - 12 C vs. G 0.217 (C) - <1 (-) 0 (-) <5.00e-08
rs2158072 chr17:43950195 MAPT [-21553bp] C - 12 T vs. C 0.208 (C) - >1 (-) 0 (-) <5.00e-08
rs28416808 chr17:44021218 MAPT C - 12 T vs. C 0.217 (T) - <1 (-) 0 (-) <5.00e-08
rs62056777 chr17:43970303 MAPT [-1445bp] C - 12 A vs. G 0.208 (A) - <1 (-) 0 (-) <5.00e-08
rs11079729 chr17:44115569 KANSL1 C - 12 A vs. C 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs55893711 chr17:44119320 KANSL1 C - 12 T vs. C - - <1 (-) 0 (-) <5.00e-08
rs17574796 chr17:44115074 KANSL1 C - 12 T vs. C 0.217 (C) - >1 (-) 0 (-) <5.00e-08
rs3919455 chr17:43953707 MAPT [-18041bp] C - 12 T vs. C 0.217 (T) - <1 (-) 0 (-) <5.00e-08
rs55649944 chr17:44119463 KANSL1 C - 12 T vs. C - - <1 (-) 0 (-) <5.00e-08
rs41437445 chr17:44116238 KANSL1 C - 12 A vs. G 0.2 (A) - <1 (-) 0 (-) <5.00e-08
rs76329216 chr17:43938499 SPPL2C [+14061bp] C - 12 A vs. G 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs10514897 chr17:44117397 KANSL1 C - 12 A vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs62055497 chr17:43953529 MAPT [-18219bp] C - 12 A vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs753236 chr17:43946318 SPPL2C [+21880bp] C - 12 T vs. C 0.217 (C) - >1 (-) 0 (-) <5.00e-08
rs62063682 chr17:44131622 KANSL1 C - 12 A vs. G - - <1 (-) 0 (-) <5.00e-08
rs62055488 chr17:43950394 MAPT [-21354bp] C - 12 T vs. C - - <1 (-) 0 (-) <5.00e-08
rs62055495 chr17:43953043 MAPT [-18705bp] C - 12 A vs. C - - >1 (-) 0 (-) <5.00e-08
rs62055486 chr17:43949092 MAPT [-22656bp] C - 12 T vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs62054844 chr17:43937333 SPPL2C [+12895bp] C - 12 T vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs34739559 chr17:43949342 MAPT [-22406bp] C - 12 A vs. G 0.192 (A) - <1 (-) 0 (-) <5.00e-08
rs2106784 chr17:43949892 MAPT [-21856bp] C - 12 T vs. C 0.217 (T) - <1 (-) 0 (-) <5.00e-08
rs41374248 chr17:44120442 KANSL1 C - 12 A vs. G 0.208 (G) - >1 (-) 0 (-) <5.00e-08
rs34097347 chr17:43949448 MAPT [-22300bp] C - 12 A vs. C 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs55673340 chr17:43948733 MAPT [-23015bp] C - 12 T vs. C - - <1 (-) 0 (-) <5.00e-08
rs62055483 chr17:43948040 SPPL2C [+23602bp] C - 12 T vs. C 0.217 (T) - <1 (-) 0 (-) <5.00e-08
rs56289364 chr17:43947928 SPPL2C [+23490bp] C - 12 A vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs62055490 chr17:43950533 MAPT [-21215bp] C - 12 A vs. G - - >1 (-) 0 (-) <5.00e-08
rs76627340 chr17:43937460 SPPL2C [+13022bp] C - 12 A vs. G 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs10514898 chr17:44119636 KANSL1 C - 12 A vs. C 0.217 (C) - >1 (-) 0 (-) <5.00e-08
rs56227067 chr17:43939609 SPPL2C [+15171bp] C - 12 A vs. T 0.217 (T) - >1 (-) 0 (-) <5.00e-08
rs62054842 chr17:43937162 SPPL2C [+12724bp] C - 12 T vs. C 0.217 (T) - <1 (-) 0 (-) <5.00e-08
rs75945623 chr17:43937505 SPPL2C [+13067bp] C - 12 T vs. C 0.208 (T) - <1 (-) 0 (-) <5.00e-08
rs55714296 chr17:44137189 KANSL1 C - 12 A vs. T 0.217 (T) - >1 (-) 0 (-) <5.00e-08
rs62063684 chr17:44132269 KANSL1 C - 12 T vs. C - - >1 (-) 0 (-) <5.00e-08
rs56398500 chr17:43947488 SPPL2C [+23050bp] C - 12 A vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs17575556 chr17:44135827 KANSL1 C - 12 A vs. G 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs2316774 chr17:43946642 SPPL2C [+22204bp] C - 12 T vs. C 0.233 (C) - >1 (-) 0 (-) <5.00e-08
rs739643 chr17:43946707 SPPL2C [+22269bp] C - 12 T vs. C 0.217 (C) - >1 (-) 0 (-) <5.00e-08
rs2316773 chr17:43946536 SPPL2C [+22098bp] C - 12 T vs. C - - <1 (-) 0 (-) <5.00e-08

Association studies for this region [+]