MAPT, chr17:43971748-44105700 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs17649553 chr17:43994648 MAPT All: C 114,483 20 T vs. C 0.217 (T) - 0.77 (0.75-0.80) 0 (0-37) 6.11e-49
Meta_image?name=rs17649553

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs62060785 chr17:44136634 KANSL1 C - 12 A vs. G 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs62055469 chr17:43943655 SPPL2C [+19217bp] C - 12 A vs. C 0.217 (C) - >1 (-) 0 (-) <5.00e-08
rs4597358 chr17:44110670 KANSL1 C - 12 C vs. G 0.225 (G) - >1 (-) 0 (-) <5.00e-08
rs974291 chr17:44150480 KANSL1 C - 12 A vs. T 0.217 (T) - >1 (-) 0 (-) <5.00e-08
rs62060837 chr17:44152760 KANSL1 C - 12 T vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs62055461 chr17:43941350 SPPL2C [+16912bp] C - 12 T vs. C 0.217 (T) - <1 (-) 0 (-) <5.00e-08
rs62060839 chr17:44153227 KANSL1 C - 12 A vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs62060840 chr17:44153258 KANSL1 C - 12 A vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs62055470 chr17:43943657 SPPL2C [+19219bp] C - 12 A vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs62060838 chr17:44153144 KANSL1 C - 12 A vs. G 0.208 (G) - >1 (-) 0 (-) <5.00e-08
rs7221390 chr17:44116950 KANSL1 C - 12 T vs. G 0.225 (G) - >1 (-) 0 (-) <5.00e-08
rs55831516 chr17:44148267 KANSL1 C - 12 T vs. C 0.217 (T) - <1 (-) 0 (-) <5.00e-08
rs56323408 chr17:44147721 KANSL1 C - 12 T vs. C 0.225 (T) - <1 (-) 0 (-) <5.00e-08
rs62060841 chr17:44153386 KANSL1 C - 12 A vs. T 0.217 (T) - >1 (-) 0 (-) <5.00e-08
rs74825921 chr17:44153909 KANSL1 C - 12 A vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs62060798 chr17:44144152 KANSL1 C - 12 T vs. C 0.217 (C) - >1 (-) 0 (-) <5.00e-08
rs12150551 chr17:44150920 KANSL1 C - 12 T vs. C 0.217 (C) - >1 (-) 0 (-) <5.00e-08
rs62060812 chr17:44151667 KANSL1 C - 12 A vs. G 0.192 (G) - >1 (-) 0 (-) <5.00e-08
rs62060845 chr17:44154393 KANSL1 C - 12 A vs. G 0.2 (G) - >1 (-) 0 (-) <5.00e-08
rs17659731 chr17:44144634 KANSL1 C - 12 A vs. G 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs75641221 chr17:44145373 KANSL1 C - 12 T vs. C 0.217 (C) - >1 (-) 0 (-) <5.00e-08
rs62054858 chr17:43940188 SPPL2C [+15750bp] C - 12 T vs. C 0.217 (C) - >1 (-) 0 (-) <5.00e-08
rs62060799 chr17:44144251 KANSL1 C - 12 T vs. G 0.217 (T) - <1 (-) 0 (-) <5.00e-08
rs62054859 chr17:43940685 SPPL2C [+16247bp] C - 12 A vs. G 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs79406732 chr17:43940497 SPPL2C [+16059bp] C - 12 T vs. C 0.217 (T) - <1 (-) 0 (-) <5.00e-08
rs974293 chr17:44150233 KANSL1 C - 12 A vs. G 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs55947022 chr17:44147574 KANSL1 C - 12 A vs. G 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs12150344 chr17:44143484 KANSL1 C - 12 A vs. G 0.208 (A) - <1 (-) 0 (-) <5.00e-08
rs78637438 chr17:43945855 SPPL2C [+21417bp] C - 12 A vs. G 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs55929190 chr17:44147599 KANSL1 C - 12 C vs. G 0.217 (C) - <1 (-) 0 (-) <5.00e-08
rs56299858 chr17:43939659 SPPL2C [+15221bp] C - 12 A vs. G 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs62060797 chr17:44143344 KANSL1 C - 12 A vs. G 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs62055476 chr17:43945495 SPPL2C [+21057bp] C - 12 A vs. G 0.208 (G) - >1 (-) 0 (-) <5.00e-08
rs62060796 chr17:44143029 KANSL1 C - 12 T vs. G 0.192 (T) - <1 (-) 0 (-) <5.00e-08
rs17575773 chr17:44142879 KANSL1 C - 12 T vs. C 0.208 (T) - <1 (-) 0 (-) <5.00e-08
rs62055477 chr17:43945687 SPPL2C [+21249bp] C - 12 A vs. C 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs62060793 chr17:44142427 KANSL1 C - 12 A vs. G 0.208 (G) - >1 (-) 0 (-) <5.00e-08
rs79782347 chr17:44146567 KANSL1 C - 12 T vs. C 0.183 (C) - >1 (-) 0 (-) <5.00e-08
rs62055475 chr17:43945106 SPPL2C [+20668bp] C - 12 T vs. C 0.217 (C) - >1 (-) 0 (-) <5.00e-08
rs62060801 chr17:44145860 KANSL1 C - 12 A vs. G 0.183 (G) - >1 (-) 0 (-) <5.00e-08
rs62060800 chr17:44145592 KANSL1 C - 12 A vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs17659743 chr17:44146165 KANSL1 C - 12 C vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs56100031 chr17:44155157 KANSL1 C - 12 T vs. C - - <1 (-) 0 (-) <5.00e-08
rs74481389 chr17:44154607 KANSL1 C - 12 T vs. C 0.217 (C) - >1 (-) 0 (-) <5.00e-08
rs113414067 chr17:43955093 MAPT [-16655bp] C - 12 T vs. C 0.217 (C) - >1 (-) 0 (-) <5.00e-08
rs62060792 chr17:44141955 KANSL1 C - 12 A vs. T 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs1117253 chr17:44149297 KANSL1 C - 12 A vs. C 0.217 (C) - >1 (-) 0 (-) <5.00e-08
rs2316953 chr17:44140341 KANSL1 C - 12 A vs. G - - <1 (-) 0 (-) <5.00e-08
rs2838 chr17:44141347 KANSL1 C - 12 A vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs111825734 chr17:44019107 MAPT C - 12 T vs. G - - >1 (-) 0 (-) <5.00e-08

Association studies for this region [+]