MAPT, chr17:43971748-44105700 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs17649553 chr17:43994648 MAPT All: C 114,483 20 T vs. C 0.217 (T) - 0.77 (0.75-0.80) 0 (0-37) 6.11e-49
Meta_image?name=rs17649553

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs66660193 chr17:43994763 MAPT C - 11 A vs. G 0.075 (G) 0.133 (G) <1 (-) 0 (-) >0.05
rs143920877 chr17:44113842 KANSL1 C - 11 T vs. G - - <1 (-) 0 (-) >0.05
rs137970866 chr17:44107646 KANSL1 C - 8 A vs. C - - <1 (-) 51 (-) >0.05
rs35838379 chr17:44040184 MAPT C - 12 A vs. G 0.2 (G) 0.233 (G) <1 (-) 17 (-) >0.05
rs145484611 chr17:44004497 MAPT C - 9 A vs. T - - <1 (-) 0 (-) >0.05
rs73313152 chr17:43928950 SPPL2C [+4512bp] C - 12 C vs. G 0.05 (G) 0.15 (G) <1 (-) 0 (-) >0.05
rs4792897 chr17:44086267 MAPT C - 12 A vs. G 0.242 (G) 0.0 (G) <1 (-) 0 (-) >0.05
rs12150530 chr17:44090393 MAPT C - 12 T vs. C 0.233 (C) 0.0 (C) <1 (-) 0 (-) >0.05
rs28689858 chr17:44131368 KANSL1 C - 11 T vs. C 0.025 (T) - >1 (-) 0 (-) >0.05
rs3785878 chr17:43974147 MAPT C - 12 T vs. C 0.283 (T) 0.2 (T) >1 (-) 5 (-) >0.05
rs117559252 chr17:44044058 MAPT C - 4 A vs. C 0.017 (A) - >1 (-) 59 (-) >0.05
rs11872014 chr17:44039658 MAPT C - 4 A vs. G 0.008 (A) - >1 (-) 61 (-) >0.05
rs150389682 chr17:44106082 MAPT [+382bp] C - 4 A vs. G - - >1 (-) 0 (-) >0.05
rs141636082 chr17:43964929 MAPT [-6819bp] C - 9 T vs. C - - >1 (-) 0 (-) >0.05
rs149506968 chr17:44096936 MAPT C - 4 T vs. C - - >1 (-) 0 (-) >0.05
rs143624519 chr17:44068850 MAPT C - 7 A vs. G - - >1 (-) 0 (-) >0.05
rs117568760 chr17:44109236 KANSL1 C - 7 A vs. G 0.008 (A) - >1 (-) 10 (-) >0.05
rs144644129 chr17:44080500 MAPT C - 6 A vs. G - - >1 (-) 0 (-) >0.05
rs144507520 chr17:44029416 MAPT C - 9 T vs. G - - <1 (-) 0 (-) >0.05
rs11652003 chr17:44132659 KANSL1 C - 12 A vs. G - - >1 (-) 7 (-) >0.05
rs7212857 chr17:44132301 KANSL1 C - 12 A vs. C 0.275 (A) 0.467 (C) >1 (-) 7 (-) >0.05
rs7219300 chr17:44148117 KANSL1 C - 4 T vs. C - - <1 (-) 39 (-) >0.05
rs63750612 chr17:44068928 MAPT C - 4 A vs. G - - >1 (-) 47 (-) >0.05
rs933317 chr17:44136030 KANSL1 C - 12 T vs. C 0.25 (T) 0.0 (T) >1 (-) 6 (-) >0.05
rs2316775 chr17:43953502 MAPT [-18246bp] C - 12 A vs. G 0.267 (G) 0.0 (G) <1 (-) 0 (-) >0.05
rs16940742 chr17:44004924 MAPT C - 11 A vs. G 0.083 (G) 0.242 (G) <1 (-) 0 (-) >0.05
rs11079731 chr17:44143470 KANSL1 C - 12 T vs. C 0.242 (T) 0.0 (T) >1 (-) 7 (-) >0.05
rs11079727 chr17:43976813 MAPT C - 12 A vs. C 0.283 (A) - >1 (-) 0 (-) >0.05
rs6503456 chr17:44148705 KANSL1 C - 12 A vs. C 0.242 (C) - <1 (-) 7 (-) >0.05
rs9303524 chr17:44136576 KANSL1 C - 12 A vs. T 0.242 (T) 0.0 (T) <1 (-) 7 (-) >0.05
rs17763658 chr17:43922640 SPPL2C C - 12 A vs. G 0.075 (A) 0.183 (A) >1 (-) 0 (-) >0.05
rs7214674 chr17:44113969 KANSL1 C - 12 T vs. C 0.242 (T) 0.0 (T) >1 (-) 7 (-) >0.05
rs55735030 chr17:43932401 SPPL2C [+7963bp] C - 11 A vs. G - - >1 (-) 0 (-) >0.05
rs2316776 chr17:43996933 MAPT C - 11 T vs. C 0.1 (T) 0.217 (T) >1 (-) 0 (-) >0.05
rs150593131 chr17:43982311 MAPT C - 5 T vs. C - - <1 (-) 0 (-) >0.05
rs9898030 chr17:44147404 KANSL1 C - 12 A vs. C 0.25 (A) 0.0 (A) >1 (-) 8 (-) >0.05
rs6503454 chr17:44118269 KANSL1 C - 12 A vs. G 0.242 (G) 0.0 (G) <1 (-) 7 (-) >0.05
rs117455029 chr17:44073122 MAPT C - 11 A vs. G 0.025 (A) - >1 (-) 0 (-) >0.05
rs2301732 chr17:44144214 KANSL1 C - 8 T vs. C - 0.467 (T) <1 (-) 0 (-) >0.05
rs117140966 chr17:44064126 MAPT C - 8 A vs. G 0.017 (A) - >1 (-) 48 (-) >0.05
rs149561857 chr17:44092866 MAPT C - 4 A vs. G - - <1 (-) 0 (-) >0.05
rs12449717 chr17:44134954 KANSL1 C - 8 C vs. G - 0.467 (G) >1 (-) 0 (-) >0.05
rs63750072 chr17:44060859 MAPT C - 12 A vs. G 0.083 (G) - <1 (-) 0 (-) >0.05
rs147983696 chr17:44014378 MAPT C - 3 T vs. C - - >1 (-) 0 (-) >0.05
rs140359269 chr17:44022846 MAPT C - 7 T vs. C - - >1 (-) 0 (-) >0.05
rs12150057 chr17:44146963 KANSL1 C - 11 A vs. G - - <1 (-) 0 (-) >0.05
rs9896680 chr17:44154450 KANSL1 C - 4 T vs. C - - >1 (-) 44 (-) >0.05
rs151268513 chr17:44030136 MAPT C - 4 A vs. G - - <1 (-) 66 (-) >0.05
rs8078641 chr17:44153522 KANSL1 C - 4 A vs. G - - >1 (-) 44 (-) >0.05
rs150637158 chr17:44054421 MAPT C - 5 A vs. T - - >1 (-) 0 (-) >0.05

Association studies for this region [+]