MAPT, chr17:43971748-44105700 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs17649553 chr17:43994648 MAPT All: C 114,483 20 T vs. C 0.217 (T) - 0.77 (0.75-0.80) 0 (0-37) 6.11e-49
Meta_image?name=rs17649553

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs140926888 chr17:43932325 SPPL2C [+7887bp] C - 11 A vs. G - - >1 (-) 0 (-) >0.05
rs138538686 chr17:44078352 MAPT C - 7 A vs. G - - >1 (-) 0 (-) >0.05
rs150412987 chr17:44148456 KANSL1 C - 4 T vs. C - - <1 (-) 45 (-) >0.05
rs28495554 chr17:44145953 KANSL1 C - 4 T vs. C - - <1 (-) 45 (-) >0.05
rs140915441 chr17:44123625 KANSL1 C - 3 C vs. G - - <1 (-) 66 (-) >0.05
rs16940838 chr17:44112733 KANSL1 C - 3 A vs. G - - >1 (-) 68 (-) >0.05
rs146674965 chr17:44092150 MAPT C - 7 A vs. G - - <1 (-) 0 (-) >0.05
rs60426848 chr17:44007550 MAPT C - 12 A vs. G 0.092 (A) 0.242 (A) >1 (-) 0 (-) >0.05
rs60128610 chr17:43987942 MAPT C - 12 A vs. T 0.283 (A) 0.142 (A) >1 (-) 0 (-) >0.05
rs8065165 chr17:43970317 MAPT [-1431bp] C - 12 T vs. C 0.3 (T) 0.0 (T) >1 (-) 0 (-) >0.05
rs8074761 chr17:44124640 KANSL1 C - 12 A vs. G 0.25 (A) 0.0 (A) >1 (-) 8 (-) >0.05
rs117977938 chr17:44043717 MAPT C - 11 C vs. G 0.05 (C) - >1 (-) 0 (-) >0.05
rs116204525 chr17:44046192 MAPT C - 11 T vs. C 0.05 (C) - <1 (-) 0 (-) >0.05
rs16940802 chr17:44103704 MAPT C - 6 A vs. G - - >1 (-) 0 (-) >0.05
rs73317053 chr17:44124482 KANSL1 C - 4 T vs. G - - >1 (-) 48 (-) >0.05
rs114542437 chr17:44105861 MAPT [+161bp] C - 3 A vs. C 0.017 (C) - <1 (-) 68 (-) >0.05
rs114213384 chr17:44105385 MAPT C - 3 A vs. G - - <1 (-) 68 (-) >0.05
rs9912534 chr17:44121329 KANSL1 C - 4 A vs. G - - <1 (-) 48 (-) >0.05
rs117539395 chr17:44099309 MAPT C - 8 C vs. G - 0.442 (C) <1 (-) 0 (-) >0.05
rs11870325 chr17:44119862 KANSL1 C - 4 T vs. C - - >1 (-) 48 (-) >0.05
rs1158660 chr17:43945288 SPPL2C [+20850bp] C - 12 A vs. G 0.35 (A) 0.217 (A) >1 (-) 14 (-) >0.05
rs117079030 chr17:44131417 KANSL1 C - 9 A vs. G - 0.467 (G) >1 (-) 0 (-) >0.05
rs7207981 chr17:44119523 KANSL1 C - 4 A vs. G - - >1 (-) 8 (-) >0.05
rs149316672 chr17:44068201 MAPT C - 3 T vs. C - - <1 (-) 0 (-) >0.05
rs2277613 chr17:44117135 KANSL1 C - 9 T vs. C - 0.467 (C) >1 (-) 0 (-) >0.05
rs117224340 chr17:44021048 MAPT C - 6 T vs. C 0.008 (T) - <1 (-) 46 (-) >0.05
rs116980531 chr17:44020857 MAPT C - 6 A vs. G 0.008 (G) - >1 (-) 46 (-) >0.05
rs929223 chr17:43922897 SPPL2C C - 11 A vs. G - - >1 (-) 0 (-) >0.05
rs150150664 chr17:44116993 KANSL1 C - 4 T vs. C - - >1 (-) 0 (-) >0.05
rs141299045 chr17:43948804 MAPT [-22944bp] C - 8 A vs. G - - >1 (-) 0 (-) >0.05
rs12603508 chr17:44038144 MAPT C - 4 T vs. C - 0.2 (T) >1 (-) 0 (-) >0.05
rs148981495 chr17:43926576 SPPL2C [+2138bp] C - 11 A vs. G - - >1 (-) 0 (-) >0.05
rs117730343 chr17:43957640 MAPT [-14108bp] C - 10 C vs. G 0.017 (G) - <1 (-) 0 (-) >0.05
rs141013430 chr17:44067945 MAPT C - 4 A vs. G - - <1 (-) 0 (-) >0.05
rs147575883 chr17:43926495 SPPL2C [+2057bp] C - 11 T vs. C - - >1 (-) 0 (-) >0.05
rs141260870 chr17:43978795 MAPT C - 6 T vs. C - - >1 (-) 2 (-) >0.05
rs139363848 chr17:43938221 SPPL2C [+13783bp] C - 3 A vs. G - - <1 (-) 0 (-) >0.05
rs141103705 chr17:43967674 MAPT [-4074bp] C - 6 A vs. G - - >1 (-) 11 (-) >0.05
rs114015305 chr17:43947517 SPPL2C [+23079bp] C - 8 A vs. G - - <1 (-) 0 (-) >0.05
rs149673847 chr17:44108394 KANSL1 C - 9 A vs. G - - >1 (-) 0 (-) >0.05
rs117008377 chr17:44017306 MAPT C - 5 T vs. G 0.008 (G) - >1 (-) 0 (-) >0.05
rs118020479 chr17:44069853 MAPT C - 4 T vs. C - 0.175 (T) >1 (-) 0 (-) >0.05
rs141507293 chr17:44037615 MAPT C - 6 A vs. G - - <1 (-) 0 (-) >0.05
rs117550325 chr17:44085971 MAPT C - 5 T vs. C 0.008 (C) - <1 (-) 0 (-) >0.05
rs147726136 chr17:43930096 SPPL2C [+5658bp] C - 4 A vs. G - - <1 (-) 0 (-) >0.05
rs117915480 chr17:44000530 MAPT C - 5 T vs. C 0.008 (T) - >1 (-) 0 (-) >0.05
rs148721531 chr17:44051927 MAPT C - 7 T vs. C - - <1 (-) 0 (-) >0.05
rs142933364 chr17:44035753 MAPT C - 3 T vs. C - - <1 (-) 0 (-) >0.05
rs149528277 chr17:44106652 KANSL1 [-630bp] C - 4 T vs. C - - >1 (-) 0 (-) >0.05
rs144075202 chr17:43928673 SPPL2C [+4235bp] C - 3 A vs. G - - >1 (-) 0 (-) >0.05

Association studies for this region [+]