MCCC1, chr3:182733006-182833863 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs12637471 chr3:182762437 MCCC1 All: C 120,238 21 A vs. G 0.242 (A) 0.417 (G) 0.84 (0.81-0.87) 35 (0-62) 5.38e-22
Meta_image?name=rs12637471

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs76291226 chr3:182725563 MCCC1 [-7443bp] C - 13 A vs. G 0.033 (A) 0.125 (A) <1 (-) 39 (-) >0.05
rs6443844 chr3:182752328 MCCC1 C - 13 A vs. C 0.058 (C) - <1 (-) 13 (-) >0.05
rs9838514 chr3:182809593 MCCC1 C - 13 A vs. G - 0.083 (G) <1 (-) 30 (-) >0.05
rs4859154 chr3:182761598 MCCC1 C - 13 T vs. C 0.067 (T) 0.0 (T) >1 (-) 12 (-) >0.05
rs1135365 chr3:182737208 MCCC1 C - 13 A vs. T 0.067 (A) - >1 (-) 11 (-) >0.05
rs9861225 chr3:182766169 MCCC1 C - 13 T vs. C 0.058 (C) 0.0 (C) <1 (-) 9 (-) >0.05
rs6443846 chr3:182768875 MCCC1 C - 13 A vs. T 0.058 (T) - <1 (-) 9 (-) >0.05
rs4859153 chr3:182760794 MCCC1 C - 13 T vs. C 0.067 (T) 0.0 (T) >1 (-) 12 (-) >0.05
rs6801608 chr3:182770666 MCCC1 C - 13 T vs. C 0.058 (T) 0.0 (T) >1 (-) 9 (-) >0.05
rs598002 chr3:182845925 LAMP3 C - 13 C vs. G - - >1 (-) 43 (-) >0.05
rs10937109 chr3:182754574 MCCC1 C - 13 A vs. G 0.075 (A) - >1 (-) 13 (-) >0.05
rs4063930 chr3:182836745 MCCC1 [+2882bp] C - 13 C vs. G 0.067 (C) - >1 (-) 43 (-) >0.05
rs2314735 chr3:182836561 MCCC1 [+2698bp] C - 13 T vs. C - - >1 (-) 43 (-) >0.05
rs831255 chr3:182836242 MCCC1 [+2379bp] C - 13 A vs. G - - <1 (-) 43 (-) >0.05
rs650855 chr3:182834205 MCCC1 [+342bp] C - 13 T vs. C 0.067 (T) 0.208 (T) >1 (-) 44 (-) >0.05
rs6443845 chr3:182752330 MCCC1 C - 13 A vs. G 0.075 (G) 0.008 (G) <1 (-) 9 (-) >0.05
rs7632904 chr3:182783101 MCCC1 C - 13 A vs. C 0.058 (A) - >1 (-) 7 (-) >0.05
rs583620 chr3:182845096 LAMP3 C - 13 A vs. C 0.067 (C) 0.217 (C) <1 (-) 40 (-) >0.05
rs4859262 chr3:182732394 MCCC1 [-612bp] C - 13 T vs. C 0.05 (C) - <1 (-) 7 (-) >0.05
rs4361307 chr3:182836966 LAMP3 [-3035bp] C - 13 T vs. C 0.067 (T) 0.208 (T) >1 (-) 42 (-) >0.05
rs12498020 chr3:182800575 MCCC1 C - 13 A vs. G 0.033 (A) 0.142 (A) >1 (-) 32 (-) >0.05
rs6785680 chr3:182789367 MCCC1 C - 13 T vs. C 0.083 (T) 0.0 (T) >1 (-) 9 (-) >0.05
rs11917464 chr3:182736611 MCCC1 C - 13 A vs. G 0.067 (A) 0.0 (A) >1 (-) 15 (-) >0.05
rs7614408 chr3:182836994 LAMP3 [-3007bp] C - 13 C vs. G 0.067 (C) 0.208 (C) >1 (-) 42 (-) >0.05
rs6443848 chr3:182789561 MCCC1 C - 13 T vs. C 0.075 (T) 0.0 (T) >1 (-) 11 (-) >0.05
rs7622479 chr3:182790249 MCCC1 C - 13 A vs. G 0.075 (G) 0.0 (G) <1 (-) 11 (-) >0.05
rs4859274 chr3:182787045 MCCC1 C - 13 T vs. C 0.058 (C) 0.0 (C) <1 (-) 10 (-) >0.05
rs7433755 chr3:182733901 MCCC1 C - 13 A vs. G - - >1 (-) 5 (-) >0.05
rs12497989 chr3:182800521 MCCC1 C - 13 A vs. G 0.033 (A) 0.142 (A) >1 (-) 32 (-) >0.05
rs6786878 chr3:182735182 MCCC1 C - 13 A vs. C 0.067 (C) - <1 (-) 7 (-) >0.05
rs684708 chr3:182869577 LAMP3 C - 13 A vs. C 0.108 (A) 0.092 (A) >1 (-) 23 (-) >0.05
rs553629 chr3:182838509 LAMP3 [-1492bp] C - 13 A vs. G 0.067 (G) 0.208 (G) <1 (-) 41 (-) >0.05
rs6782692 chr3:182791848 MCCC1 C - 13 A vs. G 0.058 (G) 0.0 (G) <1 (-) 12 (-) >0.05
rs10804888 chr3:182735311 MCCC1 C - 13 T vs. C 0.067 (C) 0.0 (C) <1 (-) 10 (-) >0.05
rs74997262 chr3:182865508 LAMP3 C - 9 T vs. C 0.042 (C) - <1 (-) 32 (-) >0.05
rs77672120 chr3:182799139 MCCC1 C - 13 T vs. C 0.033 (T) 0.142 (T) >1 (-) 32 (-) >0.05
rs580788 chr3:182834168 MCCC1 [+305bp] C - 13 A vs. G 0.067 (A) 0.208 (A) >1 (-) 44 (-) >0.05
rs2134429 chr3:182832537 MCCC1 C - 13 C vs. G 0.067 (G) 0.208 (G) <1 (-) 44 (-) >0.05
rs685585 chr3:182869364 LAMP3 C - 13 T vs. C - - <1 (-) 23 (-) >0.05
rs578111 chr3:182833857 MCCC1 C - 13 A vs. G 0.067 (A) 0.208 (A) >1 (-) 44 (-) >0.05
rs597628 chr3:182845878 LAMP3 C - 13 A vs. G - - >1 (-) 41 (-) >0.05
rs79456945 chr3:182798883 MCCC1 C - 13 A vs. G 0.033 (A) 0.142 (A) >1 (-) 32 (-) >0.05
rs4859155 chr3:182813852 MCCC1 C - 13 A vs. G 0.025 (A) 0.0 (A) >1 (-) 2 (-) >0.05
rs4308303 chr3:182837127 LAMP3 [-2874bp] C - 13 A vs. G 0.092 (A) 0.208 (A) >1 (-) 42 (-) >0.05
rs481410 chr3:182869109 LAMP3 C - 13 A vs. T 0.1 (T) 0.092 (T) <1 (-) 25 (-) >0.05
rs6414500 chr3:182871299 LAMP3 C - 13 T vs. G 0.1 (T) 0.092 (T) >1 (-) 25 (-) >0.05
rs6762481 chr3:182870788 LAMP3 C - 13 T vs. C - - <1 (-) 26 (-) >0.05
rs6443850 chr3:182790666 MCCC1 C - 13 C vs. G 0.058 (G) 0.0 (G) <1 (-) 11 (-) >0.05
rs1547910 chr3:182731930 MCCC1 [-1076bp] C - 13 T vs. C 0.058 (T) - >1 (-) 4 (-) >0.05
rs564468 chr3:182868431 LAMP3 C - 13 A vs. G 0.1 (A) 0.092 (A) >1 (-) 26 (-) >0.05

Association studies for this region [+]