MICA, chr6:31371356-31383092 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9266630 chr6:31346869 RNU6-283P [+8852bp] All: C 103,235 14 A vs. C 0.258 (A) 0.2 (A) 1.09 (1.05-1.13) 10 (0-49) 1.25e-05
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All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9266630 chr6:31346869 RNU6-283P [+8852bp] All: C 103,235 14 A vs. C 0.258 (A) 0.2 (A) 1.09 (1.05-1.13) 10 (0-49) 1.25e-05
rs4463302 chr6:31343667 RNU6-283P [+5650bp] All: C 93,766 12 C vs. T 0.067 (C) 0.125 (C) 1.13 (1.06-1.21) 32 (0-65) 2.20e-04
rs62395278 chr6:31418886 MICA [+35794bp] All: C 98,352 11 C vs. T 0.042 (C) 0.125 (C) 0.83 (0.75-0.92) 23 (0-62) 2.55e-04
rs13198903 chr6:31344157 RNU6-283P [+6140bp] All: C 93,766 12 T vs. C 0.067 (T) 0.092 (T) 1.13 (1.06-1.20) 24 (0-61) 2.72e-04
rs6909636 chr6:31346599 RNU6-283P [+8582bp] All: C 103,235 14 A vs. G 0.375 (A) 0.458 (G) 0.94 (0.91-0.97) 0 (0-49) 3.24e-04
rs9266710 chr6:31349396 RNU6-283P [+11379bp] All: C 103,235 14 C vs. T 0.283 (C) 0.108 (C) 1.07 (1.03-1.11) 12 (0-51) 4.82e-04
rs2905716 chr6:31337167 RNU6-283P [-744bp] All: C 98,798 12 A vs. G 0.183 (A) 0.075 (A) 1.08 (1.04-1.13) 0 (0-59) 5.42e-04
rs2922995 chr6:31337156 RNU6-283P [-755bp] All: C 98,798 12 T vs. C 0.183 (T) 0.075 (T) 1.08 (1.04-1.13) 1 (0-59) 5.56e-04
rs62395275 chr6:31405771 MICA [+22679bp] All: C 98,352 11 G vs. A 0.05 (G) 0.133 (G) 0.82 (0.73-0.92) 15 (0-56) 5.91e-04
rs13193697 chr6:31345815 RNU6-283P [+7798bp] All: C 90,495 11 C vs. T - - 0.78 (0.68-0.90) 8 (0-63) 5.94e-04
rs62395274 chr6:31405524 MICA [+22432bp] All: C 98,352 11 G vs. A 0.05 (G) 0.125 (G) 0.82 (0.73-0.92) 15 (0-56) 5.96e-04
rs62395307 chr6:31429512 MICB [-33146bp] All: C 102,789 13 A vs. G 0.042 (A) 0.108 (A) 0.86 (0.79-0.94) 0 (0-55) 5.97e-04
rs9266716 chr6:31349727 RNU6-283P [+11710bp] All: C 103,235 14 C vs. T 0.342 (C) 0.125 (C) 1.06 (1.03-1.10) 15 (0-54) 5.97e-04
rs9266715 chr6:31349720 RNU6-283P [+11703bp] All: C 103,235 14 C vs. T 0.325 (C) 0.108 (C) 1.06 (1.03-1.10) 16 (0-54) 6.06e-04
rs9266719 chr6:31349805 RNU6-283P [+11788bp] All: C 103,235 14 C vs. A 0.325 (C) 0.108 (C) 1.06 (1.03-1.10) 15 (0-53) 6.08e-04
rs9266691 chr6:31348629 RNU6-283P [+10612bp] All: C 103,235 14 A vs. G 0.292 (A) 0.108 (A) 1.07 (1.03-1.11) 15 (0-53) 6.66e-04
rs2523566 chr6:31330099 HLA-B [+5134bp] All: C 96,035 11 T vs. C 0.192 (T) 0.042 (T) 1.09 (1.04-1.15) 13 (0-53) 6.72e-04
rs6918524 chr6:31426303 MICB [-36355bp] All: C 102,789 13 G vs. A 0.033 (G) 0.117 (G) 0.86 (0.78-0.94) 0 (0-51) 6.76e-04
rs9266708 chr6:31349254 RNU6-283P [+11237bp] All: C 103,235 14 G vs. A 0.292 (G) 0.108 (G) 1.07 (1.03-1.11) 10 (0-48) 8.52e-04
rs9266709 chr6:31349257 RNU6-283P [+11240bp] All: C 103,235 14 G vs. A 0.308 (G) 0.125 (G) 1.07 (1.03-1.11) 10 (0-48) 8.52e-04
rs9266706 chr6:31349222 RNU6-283P [+11205bp] All: C 103,235 14 A vs. C 0.283 (A) 0.108 (A) 1.07 (1.03-1.11) 12 (0-51) 9.02e-04
rs9266705 chr6:31349217 RNU6-283P [+11200bp] All: C 103,235 14 T vs. C 0.275 (T) 0.108 (T) 1.07 (1.03-1.11) 12 (0-51) 9.03e-04
rs9266717 chr6:31349743 RNU6-283P [+11726bp] All: C 103,235 14 A vs. G 0.333 (A) 0.158 (A) 1.06 (1.03-1.10) 8 (0-45) 9.13e-04
rs2523556 chr6:31331383 HLA-B [+6418bp] All: C 96,035 11 A vs. G 0.192 (A) 0.075 (A) 1.08 (1.03-1.14) 7 (0-63) 9.40e-04
rs2523555 chr6:31331520 RNU6-283P [-6391bp] All: C 96,035 11 C vs. T - - 0.92 (0.88-0.97) 6 (0-63) 9.52e-04
rs2596549 chr6:31331166 HLA-B [+6201bp] All: C 96,035 11 A vs. G 0.192 (A) 0.075 (A) 1.08 (1.03-1.14) 7 (0-63) 9.58e-04
rs9378248 chr6:31326289 HLA-B [+1324bp] C - 6 A vs. G 0.217 (A) 0.5 (A) <1 (-) 0 (-) <0.05
rs2596478 chr6:31327861 HLA-B [+2896bp] C - 9 T vs. C - - <1 (-) 18 (-) <0.05
rs115378916 chr6:31347768 RNU6-283P [+9751bp] C - 10 A vs. T 0.067 (T) 0.125 (T) <1 (-) 32 (-) <0.05
rs13202464 chr6:31344583 RNU6-283P [+6566bp] C - 10 A vs. G 0.067 (G) 0.125 (G) <1 (-) 31 (-) <0.05
rs3093960 chr6:31403518 MICA [+20426bp] C - 10 T vs. C 0.183 (T) 0.042 (T) >1 (-) 3 (-) <0.05
rs9405084 chr6:31326251 HLA-B [+1286bp] C - 7 T vs. C - - <1 (-) 0 (-) <0.05
rs2596429 chr6:31334821 RNU6-283P [-3090bp] C - 9 A vs. T 0.192 (A) 0.042 (A) >1 (-) 21 (-) <0.05
rs35658952 chr6:31327452 HLA-B [+2487bp] All: C 73,071 4 C vs. T - - 0.74 (0.60-0.90) 47 (0-82) 0.002
rs2853976 chr6:31345270 RNU6-283P [+7253bp] All: C 103,235 14 C vs. T 0.442 (C) 0.442 (C) 1.05 (1.02-1.09) 0 (0-39) 0.003
rs9266718 chr6:31349788 RNU6-283P [+11771bp] C - 12 T vs. C 0.342 (C) 0.142 (C) <1 (-) 27 (-) <0.05
rs9266366 chr6:31333032 RNU6-283P [-4879bp] C - 9 T vs. C - - >1 (-) 19 (-) <0.05
rs2596548 chr6:31330546 HLA-B [+5581bp] C - 9 T vs. G 0.192 (T) 0.075 (T) >1 (-) 19 (-) <0.05
rs2523553 chr6:31331948 RNU6-283P [-5963bp] C - 9 A vs. C 0.192 (C) 0.075 (C) <1 (-) 16 (-) <0.05
rs3016016 chr6:31333006 RNU6-283P [-4905bp] C - 9 A vs. G - - >1 (-) 21 (-) <0.05
rs35267732 chr6:31326779 HLA-B [+1814bp] C - 4 A vs. T 0.067 (A) 0.133 (A) >1 (-) 0 (-) <0.05
rs2523557 chr6:31331257 HLA-B [+6292bp] C - 11 A vs. G 0.433 (G) 0.133 (G) <1 (-) 54 (-) <0.05
rs2523489 chr6:31348878 RNU6-283P [+10861bp] All: C 103,235 14 T vs. C 0.292 (T) 0.108 (T) 1.06 (1.02-1.09) 11 (0-49) 0.005
rs3016015 chr6:31333091 RNU6-283P [-4820bp] C - 10 A vs. G 0.183 (A) 0.075 (A) >1 (-) 19 (-) <0.05
rs9266363 chr6:31332977 RNU6-283P [-4934bp] C - 10 A vs. G - - >1 (-) 19 (-) <0.05
rs2844576 chr6:31334601 RNU6-283P [-3310bp] C - 10 T vs. C 0.217 (T) 0.075 (T) >1 (-) 20 (-) <0.05
rs2516469 chr6:31409142 MICA [+26050bp] C - 11 C vs. G 0.183 (G) 0.042 (G) <1 (-) 23 (-) <0.05
rs2523542 chr6:31335156 RNU6-283P [-2755bp] C - 10 A vs. G 0.192 (A) 0.075 (A) >1 (-) 20 (-) <0.05
rs2596427 chr6:31334393 RNU6-283P [-3518bp] C - 10 A vs. T 0.208 (A) 0.075 (A) >1 (-) 20 (-) <0.05
rs2523485 chr6:31351035 RNU6-283P [+13018bp] All: C 103,235 14 T vs. C 0.183 (T) 0.042 (T) 1.07 (1.02-1.12) 25 (0-61) 0.006

Association studies for this region [+]