MTX1, chr1:155178490-155183615 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs35749011 chr1:155135036 KRTCAP2 [-6848bp] All: C 104,595 13 G vs. A - - 0.57 (0.51-0.64) 0 (0-23) 6.10e-23
Meta_image?name=rs35749011

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs35749011 chr1:155135036 KRTCAP2 [-6848bp] All: C 104,595 13 G vs. A - - 0.57 (0.51-0.64) 0 (0-23) 6.10e-23
rs115542391 chr1:155130126 KRTCAP2 [-11758bp] C - 10 T vs. C 0.017 (T) - <1 (-) 44 (-) <0.05
rs113690547 chr1:155190282 MTX1 [+6667bp] C - 11 T vs. G 0.117 (G) - >1 (-) 20 (-) <0.05
rs41264935 chr1:155232867 CLK2 C - 5 A vs. G 0.008 (G) - <1 (-) 13 (-) <0.05
rs2230289 chr1:155205637 GBA C - 5 A vs. G - - >1 (-) 7 (-) <0.05
rs141948708 chr1:155185177 MTX1 [+1562bp] C - 4 A vs. G - - <1 (-) 0 (-) <0.05
rs75238698 chr1:155179312 MTX1 C - 10 C vs. G - - <1 (-) 0 (-) >0.05
rs114099990 chr1:155208183 GBA C - 10 T vs. C - - >1 (-) 0 (-) >0.05
rs2990247 chr1:155197827 GBA [-6416bp] C - 11 T vs. C 0.033 (T) - >1 (-) 14 (-) >0.05
rs78516530 chr1:155154972 TRIM46 C - 10 C vs. G 0.033 (G) - >1 (-) 0 (-) >0.05
rs41264921 chr1:155181232 MTX1 C - 11 A vs. G - - <1 (-) 0 (-) >0.05
rs16836748 chr1:155194679 GBA [-9564bp] C - 11 A vs. G 0.017 (G) - >1 (-) 0 (-) >0.05
rs4644481 chr1:155130900 KRTCAP2 [-10984bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs4971077 chr1:155128717 RNU7-150P [+12909bp] C - 13 T vs. C 0.5 (T) - >1 (-) 0 (-) >0.05
rs147869881 chr1:155219452 FAM189B C - 3 T vs. C - - >1 (-) 0 (-) >0.05
rs111587150 chr1:155129402 KRTCAP2 [-12482bp] C - 10 A vs. G - - >1 (-) 0 (-) >0.05
rs12129003 chr1:155129562 KRTCAP2 [-12322bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs1057941 chr1:155186742 MTX1 [+3127bp] C - 12 A vs. G 0.383 (A) - >1 (-) 0 (-) >0.05
rs4971078 chr1:155129023 KRTCAP2 [-12861bp] C - 13 A vs. G 0.425 (G) - >1 (-) 0 (-) >0.05
rs4971054 chr1:155130258 KRTCAP2 [-11626bp] C - 13 T vs. G - - >1 (-) 0 (-) >0.05
rs12124306 chr1:155133799 KRTCAP2 [-8085bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs12127609 chr1:155133491 KRTCAP2 [-8393bp] C - 13 C vs. G 0.417 (C) 0.15 (G) <1 (-) 0 (-) >0.05
rs12028043 chr1:155132836 KRTCAP2 [-9048bp] C - 13 A vs. G 0.425 (G) 0.125 (A) >1 (-) 0 (-) >0.05
rs34257409 chr1:155131394 KRTCAP2 [-10490bp] C - 13 T vs. G - - <1 (-) 0 (-) >0.05
rs4276913 chr1:155131673 KRTCAP2 [-10211bp] C - 13 A vs. G 0.425 (G) 0.15 (A) >1 (-) 0 (-) >0.05
rs77150642 chr1:155166794 THBS3 C - 10 A vs. G - - >1 (-) 0 (-) >0.05
rs1064635 chr1:155188811 MTX1 [+5196bp] C - 9 A vs. C - - <1 (-) 0 (-) >0.05
rs114324536 chr1:155188761 MTX1 [+5146bp] C - 9 T vs. C 0.025 (C) - <1 (-) 0 (-) >0.05
rs72704108 chr1:155140484 KRTCAP2 [-1400bp] C - 5 T vs. C - - >1 (-) 31 (-) >0.05
rs144498728 chr1:155166157 THBS3 C - 9 A vs. G - - <1 (-) 0 (-) >0.05
rs4971100 chr1:155155731 TRIM46 C - 11 A vs. G 0.458 (A) 0.2 (G) >1 (-) 8 (-) >0.05
rs75925257 chr1:155138842 KRTCAP2 [-3042bp] C - 10 A vs. G 0.075 (A) - <1 (-) 19 (-) >0.05
rs4590664 chr1:155130811 KRTCAP2 [-11073bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs12406363 chr1:155215262 GBA [+772bp] C - 5 T vs. C - - <1 (-) 0 (-) >0.05
rs28445596 chr1:155186729 MTX1 [+3114bp] C - 13 T vs. C 0.442 (T) 0.192 (T) <1 (-) 0 (-) >0.05
rs2974929 chr1:155197268 GBA [-6975bp] C - 13 T vs. C 0.467 (T) 0.192 (T) <1 (-) 0 (-) >0.05
rs2049805 chr1:155194980 GBA [-9263bp] C - 13 T vs. C 0.433 (T) 0.192 (T) <1 (-) 0 (-) >0.05
rs497829 chr1:155193532 MTX1 [+9917bp] C - 13 C vs. G 0.433 (C) 0.192 (C) <1 (-) 0 (-) >0.05
rs2974930 chr1:155196717 GBA [-7526bp] C - 13 A vs. G 0.433 (A) 0.2 (A) <1 (-) 0 (-) >0.05
rs390685 chr1:155182147 MTX1 C - 3 A vs. G - - <1 (-) 0 (-) >0.05
rs59352002 chr1:155222730 FAM189B C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs61092432 chr1:155222729 FAM189B C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs2990245 chr1:155197462 GBA [-6781bp] C - 13 T vs. C 0.433 (C) 0.192 (C) >1 (-) 0 (-) >0.05
rs2075570 chr1:155182164 MTX1 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs2974935 chr1:155181843 MTX1 C - 13 T vs. G - - >1 (-) 0 (-) >0.05
rs147520018 chr1:155148429 TRIM46 C - 4 C vs. G - - <1 (-) 0 (-) >0.05
rs2990220 chr1:155190254 MTX1 [+6639bp] C - 13 A vs. T 0.442 (T) - >1 (-) 0 (-) >0.05
rs144880000 chr1:155198178 GBA [-6065bp] C - 9 A vs. C - - >1 (-) 0 (-) >0.05
rs7366775 chr1:155168930 THBS3 C - 12 A vs. G - - >1 (-) 10 (-) >0.05
rs2075571 chr1:155174106 THBS3 C - 12 T vs. C - 0.2 (C) >1 (-) 16 (-) >0.05

Association studies for this region [+]