MTX1, chr1:155178490-155183615 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs35749011 chr1:155135036 KRTCAP2 [-6848bp] All: C 104,595 13 G vs. A - - 0.57 (0.51-0.64) 0 (0-23) 6.10e-23
Meta_image?name=rs35749011

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs67579710 chr1:155173527 THBS3 C - 13 A vs. G 0.133 (A) - <1 (-) 39 (-) >0.05
rs12411216 chr1:155164480 MIR92B [-488bp] C - 13 A vs. C 0.392 (A) 0.192 (A) <1 (-) 0 (-) >0.05
rs4072037 chr1:155162067 MUC1 C - 13 T vs. C 0.392 (C) 0.192 (C) >1 (-) 0 (-) >0.05
rs2009578 chr1:155207626 GBA C - 13 A vs. G 0.333 (A) 0.275 (G) >1 (-) 0 (-) >0.05
rs11264346 chr1:155223007 FAM189B C - 13 A vs. T 0.258 (A) 0.258 (T) >1 (-) 0 (-) >0.05
rs4971091 chr1:155143768 KRTCAP2 C - 13 T vs. G - - >1 (-) 0 (-) >0.05
rs150590342 chr1:155182779 MTX1 C - 8 A vs. G - - <1 (-) 0 (-) >0.05
rs114413971 chr1:155140023 KRTCAP2 [-1861bp] C - 11 A vs. C - - <1 (-) 5 (-) >0.05
rs760077 chr1:155178782 THBS3 C - 13 A vs. T 0.333 (A) 0.192 (A) <1 (-) 0 (-) >0.05
rs4971092 chr1:155143946 KRTCAP2 C - 12 T vs. C 0.142 (C) 0.0 (C) <1 (-) 37 (-) >0.05
rs762488 chr1:155207549 GBA C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs76545395 chr1:155177047 THBS3 C - 10 T vs. C 0.017 (T) - >1 (-) 0 (-) >0.05
rs11582489 chr1:155134919 KRTCAP2 [-6965bp] C - 12 A vs. G 0.042 (A) - <1 (-) 24 (-) >0.05
rs3754485 chr1:155212211 GBA C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs1800438 chr1:155212288 GBA C - 13 T vs. C 0.342 (T) 0.283 (C) >1 (-) 0 (-) >0.05
rs74890861 chr1:155166193 THBS3 C - 13 A vs. G 0.05 (A) - <1 (-) 23 (-) >0.05
rs4971093 chr1:155144300 KRTCAP2 C - 13 A vs. G 0.4 (A) 0.192 (G) >1 (-) 0 (-) >0.05
rs1800442 chr1:155212100 GBA C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs12752585 chr1:155135406 KRTCAP2 [-6478bp] C - 13 A vs. G 0.475 (G) 0.192 (G) >1 (-) 0 (-) >0.05
rs61738875 chr1:155181989 MTX1 C - 13 A vs. G 0.033 (A) - <1 (-) 23 (-) >0.05
rs11264345 chr1:155213124 GBA C - 13 A vs. T 0.342 (A) 0.275 (T) >1 (-) 0 (-) >0.05
rs4460629 chr1:155135335 KRTCAP2 [-6549bp] C - 13 T vs. C 0.475 (T) 0.192 (T) <1 (-) 0 (-) >0.05
rs4971059 chr1:155148781 TRIM46 C - 13 A vs. G 0.367 (A) 0.192 (G) >1 (-) 0 (-) >0.05
rs10908459 chr1:155214066 GBA C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs4971085 chr1:155138222 KRTCAP2 [-3662bp] C - 13 T vs. C 0.492 (T) 0.2 (T) <1 (-) 0 (-) >0.05
rs12034326 chr1:155214473 GBA C - 13 A vs. G 0.342 (G) 0.275 (A) <1 (-) 0 (-) >0.05
rs11264337 chr1:155138450 KRTCAP2 [-3434bp] C - 13 T vs. C 0.475 (C) 0.192 (C) >1 (-) 0 (-) >0.05
rs148970520 chr1:155130617 KRTCAP2 [-11267bp] C - 5 T vs. C - - <1 (-) 0 (-) >0.05
rs112270735 chr1:155198771 GBA [-5472bp] C - 13 A vs. G 0.15 (G) - >1 (-) 0 (-) >0.05
rs28373017 chr1:155205331 GBA C - 13 T vs. C 0.3 (C) - <1 (-) 0 (-) >0.05
rs141942982 chr1:155137395 KRTCAP2 [-4489bp] C - 13 T vs. G - - <1 (-) 40 (-) >0.05
rs111508230 chr1:155153537 TRIM46 C - 13 T vs. C - - <1 (-) 45 (-) >0.05
rs1611774 chr1:155157853 TRIM46 [+406bp] C - 13 T vs. G 0.083 (T) - >1 (-) 42 (-) >0.05
rs143603776 chr1:155231201 SCAMP3 C - 6 T vs. G - - <1 (-) 55 (-) >0.05
rs4421576 chr1:155142210 KRTCAP2 C - 13 A vs. G 0.475 (A) 0.183 (A) <1 (-) 0 (-) >0.05
rs11264338 chr1:155138557 KRTCAP2 [-3327bp] C - 13 A vs. G 0.483 (A) 0.192 (A) <1 (-) 0 (-) >0.05
rs7556304 chr1:155139509 KRTCAP2 [-2375bp] C - 13 T vs. C 0.475 (T) 0.192 (T) <1 (-) 0 (-) >0.05
rs4971088 chr1:155142883 KRTCAP2 C - 13 A vs. T 0.475 (T) 0.183 (T) >1 (-) 0 (-) >0.05
rs12137850 chr1:155148779 TRIM46 C - 11 T vs. G - - <1 (-) 0 (-) >0.05
rs4276914 chr1:155142229 KRTCAP2 C - 13 A vs. G 0.475 (G) 0.158 (G) >1 (-) 0 (-) >0.05
rs11264339 chr1:155140648 KRTCAP2 [-1236bp] C - 13 T vs. C 0.475 (C) 0.183 (C) >1 (-) 0 (-) >0.05
rs4971089 chr1:155142927 KRTCAP2 C - 13 A vs. G 0.475 (A) 0.183 (A) <1 (-) 0 (-) >0.05
rs11465205 chr1:155160941 MUC1 C - 10 T vs. C - - >1 (-) 4 (-) >0.05
rs11580040 chr1:155198222 GBA [-6021bp] C - 13 A vs. G - - >1 (-) 31 (-) >0.05
rs35154152 chr1:155172725 THBS3 C - 13 T vs. C 0.125 (C) - >1 (-) 37 (-) >0.05
rs41264915 chr1:155167786 THBS3 C - 13 A vs. G 0.133 (G) - >1 (-) 44 (-) >0.05
rs58939130 chr1:155144757 KRTCAP2 C - 13 T vs. C 0.067 (C) - <1 (-) 42 (-) >0.05
rs72704106 chr1:155131686 KRTCAP2 [-10198bp] C - 13 A vs. C 0.083 (A) - <1 (-) 38 (-) >0.05
rs9628662 chr1:155206341 GBA C - 11 T vs. G 0.342 (G) 0.275 (T) >1 (-) 4 (-) >0.05
rs41264911 chr1:155145392 KRTCAP2 C - 11 A vs. G 0.025 (A) - >1 (-) 35 (-) >0.05

Association studies for this region [+]