MUC19, chr12:40787197-40964632 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2052802 chr12:40824739 MUC19 All: C 108,990 15 G vs. A - - 0.89 (0.85-0.92) 0 (0-12) 2.65e-09
Meta_image?name=rs2052802

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs145537869 chr12:40848750 MUC19 All: C 103,470 14 C vs. T - - 0.73 (0.65-0.84) 0 (0-52) 2.84e-06
rs150844887 chr12:40850494 MUC19 All: C 103,470 14 G vs. A - - 0.73 (0.65-0.84) 0 (0-52) 2.84e-06
rs117096594 chr12:40866023 MUC19 All: C 108,990 15 T vs. C 0.017 (T) - 1.30 (1.16-1.46) 19 (0-56) 3.58e-06
rs77351713 chr12:40850536 MUC19 All: C 108,990 15 C vs. T 0.017 (C) - 1.31 (1.17-1.47) 22 (0-58) 3.80e-06
rs142684512 chr12:40863026 MUC19 All: C 108,990 15 T vs. G - - 0.77 (0.69-0.86) 21 (0-57) 4.08e-06
rs17445098 chr12:40839382 MUC19 All: C 108,990 15 A vs. C 0.017 (A) - 1.30 (1.16-1.45) 20 (0-57) 4.27e-06
rs144442954 chr12:40858796 MUC19 All: C 108,990 15 G vs. A - - 0.77 (0.69-0.86) 23 (0-58) 5.19e-06
rs61736778 chr12:40837165 MUC19 All: C 108,990 15 C vs. T - - 0.78 (0.69-0.87) 23 (0-58) 5.48e-06
rs80172174 chr12:40751374 LRRK2 All: C 108,990 15 T vs. C 0.017 (T) - 1.27 (1.14-1.40) 34 (0-65) 6.66e-06
rs58911468 chr12:40741678 LRRK2 All: C 108,990 15 C vs. T 0.117 (C) - 1.12 (1.07-1.18) 0 (0-47) 7.34e-06
rs11564146 chr12:40754308 LRRK2 All: C 108,990 15 T vs. C - - 0.79 (0.72-0.88) 44 (0-69) 7.89e-06
rs1365768 chr12:40755215 LRRK2 All: C 108,990 15 G vs. A - - 0.79 (0.72-0.88) 44 (0-69) 8.34e-06
rs1365769 chr12:40755289 LRRK2 All: C 108,990 15 A vs. G - - 0.79 (0.72-0.88) 44 (0-69) 8.35e-06
rs33995883 chr12:40740686 LRRK2 All: C 108,990 15 A vs. G - - 0.78 (0.69-0.87) 35 (0-65) 8.60e-06
rs11564147 chr12:40739493 LRRK2 All: C 108,990 15 A vs. G 0.125 (A) - 1.11 (1.06-1.16) 0 (0-41) 1.15e-05
chr12:40826155 chr12:40826155 MUC19 C - 11 A vs. G - - <1 (-) 34 (-) <1.00e-04
rs73277585 chr12:40776457 MUC19 [-10740bp] All: C 108,990 15 G vs. A 0.117 (G) - 1.11 (1.06-1.17) 0 (0-8) 1.49e-05
rs146841445 chr12:40957375 MUC19 All: C 105,041 14 C vs. T - - 0.76 (0.67-0.86) 17 (0-55) 1.52e-05
rs11564266 chr12:40750195 LRRK2 All: C 108,990 15 A vs. C - - 0.80 (0.72-0.88) 41 (0-68) 1.53e-05
rs17484541 chr12:40747751 LRRK2 All: C 108,990 15 G vs. A - - 0.80 (0.72-0.88) 41 (0-68) 1.55e-05
rs73277595 chr12:40778979 MUC19 [-8218bp] All: C 108,990 15 A vs. G 0.117 (A) - 1.11 (1.06-1.16) 0 (0-7) 2.27e-05
rs11564173 chr12:40750471 LRRK2 All: C 108,990 15 A vs. G 0.117 (A) - 1.10 (1.05-1.16) 0 (0-30) 2.32e-05
rs73277531 chr12:40750984 LRRK2 All: C 108,990 15 G vs. A 0.117 (G) - 1.10 (1.05-1.16) 0 (0-30) 2.34e-05
rs118038814 chr12:41011165 MUC19 [+46533bp] All: C 108,990 15 C vs. T 0.017 (C) - 1.26 (1.13-1.41) 20 (0-57) 2.55e-05
rs139941080 chr12:41006567 MUC19 [+41935bp] All: C 108,990 15 T vs. C - - 0.80 (0.72-0.89) 21 (0-57) 2.62e-05
rs117585683 chr12:40996960 MUC19 [+32328bp] All: C 108,990 15 T vs. C 0.008 (T) - 1.26 (1.13-1.40) 16 (0-54) 2.69e-05
rs17444515 chr12:40783688 MUC19 [-3509bp] All: C 108,990 15 A vs. G 0.108 (A) - 1.11 (1.06-1.17) 0 (0-3) 2.69e-05
rs73277533 chr12:40751527 LRRK2 All: C 108,990 15 A vs. G 0.125 (A) - 1.10 (1.05-1.15) 0 (0-29) 2.77e-05
rs17466969 chr12:40786828 MUC19 [-369bp] C - 13 A vs. T 0.017 (T) - <1 (-) 56 (-) <1.00e-04
rs79641772 chr12:40961521 MUC19 All: C 105,041 14 T vs. G - - 0.80 (0.73-0.89) 8 (0-45) 2.86e-05
rs75211948 chr12:40961512 MUC19 All: C 105,041 14 C vs. T - - 0.80 (0.73-0.89) 8 (0-46) 2.87e-05
rs142039485 chr12:40960879 MUC19 All: C 105,041 14 G vs. A - - 0.81 (0.73-0.89) 6 (0-58) 2.88e-05
rs117717187 chr12:40930533 MUC19 All: C 105,041 14 T vs. C 0.017 (T) - 1.30 (1.15-1.47) 13 (0-51) 3.12e-05
rs79973671 chr12:40971557 MUC19 [+6925bp] All: C 105,041 14 G vs. A 0.017 (G) - 1.24 (1.12-1.36) 13 (0-52) 3.21e-05
rs139374641 chr12:40975601 MUC19 [+10969bp] All: C 105,041 14 G vs. T - - 0.81 (0.74-0.90) 18 (0-56) 3.36e-05
rs17467178 chr12:40814270 MUC19 C - 13 A vs. T - - <1 (-) 56 (-) <1.00e-04
rs80212515 chr12:40815007 MUC19 C - 13 C vs. G 0.017 (G) - <1 (-) 56 (-) <1.00e-04
rs79081313 chr12:40972782 MUC19 [+8150bp] All: C 105,041 14 G vs. A 0.017 (G) - 1.23 (1.12-1.36) 15 (0-53) 3.48e-05
rs141037287 chr12:40788647 MUC19 C - 13 C vs. G - - >1 (-) 55 (-) <1.00e-04
rs117956459 chr12:40971118 MUC19 [+6486bp] All: C 105,041 14 A vs. G 0.017 (A) - 1.23 (1.12-1.36) 14 (0-52) 3.55e-05
rs2098965 chr12:40780721 MUC19 [-6476bp] All: C 108,990 15 A vs. G 0.117 (A) - 1.11 (1.06-1.16) 0 (0-14) 3.55e-05
rs78334550 chr12:40967583 MUC19 [+2951bp] All: C 105,041 14 T vs. C 0.017 (T) - 1.23 (1.12-1.36) 13 (0-52) 3.58e-05
rs17520775 chr12:40773020 LRRK2 [+9933bp] All: C 108,990 15 T vs. C 0.117 (T) - 1.11 (1.06-1.16) 0 (0-15) 3.62e-05
rs150459667 chr12:40972256 MUC19 [+7624bp] All: C 105,041 14 T vs. C - - 0.81 (0.74-0.90) 15 (0-53) 3.66e-05
rs11564259 chr12:40792197 MUC19 C - 13 C vs. G - - >1 (-) 56 (-) <1.00e-04
rs111919012 chr12:40969766 MUC19 [+5134bp] All: C 105,041 14 A vs. G - - 0.81 (0.74-0.90) 14 (0-53) 3.68e-05
rs11564240 chr12:40825542 MUC19 C - 13 C vs. G 0.017 (G) - <1 (-) 50 (-) <1.00e-04
rs146687709 chr12:40797511 MUC19 C - 13 A vs. T - - >1 (-) 56 (-) <1.00e-04
rs111610657 chr12:40968157 MUC19 [+3525bp] All: C 105,041 14 G vs. A - - 0.81 (0.74-0.90) 14 (0-53) 3.71e-05
rs79306701 chr12:40826687 MUC19 C - 13 A vs. T 0.017 (A) - >1 (-) 54 (-) <1.00e-04

Association studies for this region [+]