MUC19, chr12:40787197-40964632 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2052802 chr12:40824739 MUC19 All: C 108,990 15 G vs. A - - 0.89 (0.85-0.92) 0 (0-12) 2.65e-09
Meta_image?name=rs2052802

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs11836288 chr12:40753774 LRRK2 All: C 108,990 15 T vs. C 0.058 (T) 0.125 (T) 0.88 (0.83-0.94) 25 (0-59) 7.11e-05
rs112259589 chr12:40750966 LRRK2 All: C 108,990 15 T vs. C 0.075 (T) 0.1 (T) 0.88 (0.83-0.94) 24 (0-59) 7.17e-05
rs113244412 chr12:40934209 MUC19 All: C 105,041 14 G vs. A - - 0.81 (0.73-0.90) 17 (0-55) 7.23e-05
rs12426513 chr12:40787808 MUC19 All: C 108,990 15 T vs. G 0.075 (T) 0.125 (T) 0.88 (0.83-0.94) 18 (0-55) 7.71e-05
rs3751171 chr12:40951890 MUC19 All: C 108,990 15 A vs. G 0.017 (A) - 1.22 (1.11-1.35) 20 (0-56) 7.98e-05
rs117188167 chr12:40968061 MUC19 [+3429bp] All: C 105,041 14 T vs. C 0.008 (T) - 1.23 (1.11-1.36) 1 (0-56) 8.06e-05
rs3885053 chr12:40789380 MUC19 All: C 108,990 15 T vs. C 0.075 (T) 0.125 (T) 0.88 (0.83-0.94) 18 (0-55) 8.32e-05
rs73101517 chr12:40800267 MUC19 All: C 108,990 15 A vs. G 0.075 (A) 0.1 (A) 0.88 (0.83-0.94) 20 (0-56) 8.66e-05
rs74966863 chr12:40946519 MUC19 All: C 102,278 13 C vs. T 0.017 (C) - 1.23 (1.11-1.36) 24 (0-60) 9.11e-05
rs17444202 chr12:40756321 LRRK2 All: C 108,990 15 T vs. C 0.142 (T) - 1.10 (1.05-1.15) 0 (0-15) 9.30e-05
rs141711230 chr12:40947001 MUC19 All: C 102,278 13 C vs. T - - 0.82 (0.74-0.91) 24 (0-61) 9.38e-05
rs77151575 chr12:40986579 MUC19 [+21947bp] C - 13 A vs. T 0.017 (T) - <1 (-) 25 (-) <1.00e-04
rs28365238 chr12:40786497 MUC19 [-700bp] All: C 108,990 15 A vs. G 0.075 (A) 0.133 (A) 0.88 (0.82-0.94) 9 (0-47) 9.78e-05
rs113957839 chr12:40973951 MUC19 [+9319bp] C - 12 C vs. G - - >1 (-) 20 (-) <0.05
rs111741276 chr12:40909153 MUC19 C - 12 A vs. T - - >1 (-) 25 (-) <0.05
rs113068980 chr12:40972767 MUC19 [+8135bp] C - 12 C vs. G - - >1 (-) 19 (-) <0.05
rs111849415 chr12:40912761 MUC19 C - 12 C vs. G - - <1 (-) 25 (-) <0.05
rs17444285 chr12:40763652 LRRK2 [+565bp] All: C 108,990 15 T vs. G 0.15 (T) - 1.09 (1.05-1.14) 0 (0-34) 1.15e-04
rs79237076 chr12:40957782 MUC19 C - 12 A vs. T 0.017 (A) - >1 (-) 21 (-) <0.05
rs111810036 chr12:40939267 MUC19 C - 12 C vs. G 0.017 (G) - <1 (-) 22 (-) <0.05
rs17466626 chr12:40760631 LRRK2 C - 13 A vs. G 0.017 (G) - <1 (-) 52 (-) <0.05
rs148558351 chr12:40845197 MUC19 C - 13 A vs. T - - <1 (-) 26 (-) <0.05
rs112695036 chr12:40944108 MUC19 C - 12 T vs. C - - >1 (-) 28 (-) <0.05
rs12426639 chr12:40745777 LRRK2 C - 13 A vs. T - - <1 (-) 49 (-) <0.05
rs111308657 chr12:40968837 MUC19 [+4205bp] C - 11 T vs. G 0.017 (T) - >1 (-) 26 (-) <0.05
rs113535827 chr12:40782092 MUC19 [-5105bp] C - 13 C vs. G 0.117 (G) - <1 (-) 0 (-) <0.05
rs73277591 chr12:40778919 MUC19 [-8278bp] C - 13 C vs. G 0.117 (C) - >1 (-) 0 (-) <0.05
rs141893556 chr12:40789456 MUC19 C - 12 A vs. G - - <1 (-) 44 (-) <0.05
rs139528704 chr12:40790740 MUC19 C - 11 T vs. C - - <1 (-) 53 (-) <0.05
rs77220017 chr12:40822997 MUC19 C - 13 T vs. C 0.017 (C) - <1 (-) 50 (-) <0.05
rs75771828 chr12:40823002 MUC19 C - 13 A vs. G 0.017 (A) - >1 (-) 50 (-) <0.05
rs118064527 chr12:40986273 MUC19 [+21641bp] C - 11 A vs. G 0.017 (A) - <1 (-) 0 (-) <0.05
rs55769912 chr12:40991396 MUC19 [+26764bp] C - 13 C vs. G 0.333 (G) 0.242 (G) >1 (-) 0 (-) <0.05
rs7487209 chr12:40812310 MUC19 C - 13 A vs. G 0.008 (A) - >1 (-) 59 (-) <0.05
rs11564230 chr12:40837264 MUC19 C - 12 T vs. C 0.075 (C) 0.333 (C) <1 (-) 0 (-) <0.05
rs11177373 chr12:40989183 MUC19 [+24551bp] C - 13 A vs. G 0.358 (G) - >1 (-) 0 (-) <0.05
rs141283528 chr12:40962183 MUC19 C - 8 A vs. G - - <1 (-) 0 (-) <0.05
rs12423986 chr12:40803194 MUC19 C - 13 T vs. C - - <1 (-) 59 (-) <0.05
rs4767987 chr12:41006297 MUC19 [+41665bp] C - 13 A vs. T 0.483 (T) - <1 (-) 0 (-) <0.05
rs11177342 chr12:40983205 MUC19 [+18573bp] C - 13 A vs. G 0.333 (G) - >1 (-) 0 (-) <0.05
rs73094979 chr12:40795586 MUC19 All: C 108,990 15 C vs. T 0.125 (C) - 0.94 (0.90-0.98) 0 (0-26) 0.005
rs11564172 chr12:40792224 MUC19 All: C 108,990 15 A vs. C 0.125 (A) - 0.94 (0.90-0.98) 0 (0-28) 0.005
rs117437130 chr12:40818411 MUC19 C - 13 T vs. C 0.017 (T) - >1 (-) 57 (-) <0.05
rs1427262 chr12:40798608 MUC19 All: C 108,990 15 C vs. A 0.125 (C) - 0.94 (0.90-0.98) 0 (0-25) 0.005
rs11564263 chr12:40790698 MUC19 C - 13 A vs. G 0.35 (G) 0.242 (G) <1 (-) 24 (-) <0.05
rs17520991 chr12:40806115 MUC19 C - 13 A vs. T 0.075 (A) 0.125 (A) <1 (-) 0 (-) <0.05
rs10784728 chr12:40989091 MUC19 [+24459bp] C - 13 A vs. G 0.483 (G) 0.442 (A) <1 (-) 0 (-) <0.05
rs994798 chr12:40808832 MUC19 C - 13 A vs. G 0.408 (G) 0.458 (G) >1 (-) 14 (-) <0.05
rs12426498 chr12:40761315 LRRK2 C - 13 A vs. T 0.075 (T) 0.108 (T) >1 (-) 0 (-) <0.05
rs17484493 chr12:40740873 LRRK2 C - 12 T vs. C - - <1 (-) 25 (-) <0.05

Association studies for this region [+]