NDC1, chr1:54231133-54304533 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1181191 chr1:54224270 NDC1 [-6863bp] All: C 103,235 14 C vs. A - - 0.85 (0.78-0.91) 0 (0-17) 2.27e-05
Meta_image?name=rs1181191

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs72662309 chr1:54240555 NDC1 C - 13 A vs. C 0.133 (C) 0.058 (C) <1 (-) 0 (-) <0.05
rs35655487 chr1:54278471 NDC1 C - 13 T vs. C - - >1 (-) 0 (-) <0.05
rs112350581 chr1:54302624 NDC1 C - 13 T vs. C - - <1 (-) 0 (-) <0.05
rs4927041 chr1:54299440 NDC1 C - 13 A vs. G 0.125 (A) 0.067 (A) >1 (-) 0 (-) <0.05
rs113016399 chr1:54302323 NDC1 C - 13 T vs. C 0.067 (T) 0.05 (T) >1 (-) 0 (-) <0.05
rs2064457 chr1:54299674 NDC1 C - 13 A vs. G 0.125 (G) 0.067 (G) <1 (-) 0 (-) <0.05
rs72662332 chr1:54295139 NDC1 C - 13 C vs. G 0.067 (G) 0.058 (G) <1 (-) 0 (-) <0.05
rs4927040 chr1:54294766 NDC1 C - 13 A vs. G 0.067 (A) 0.05 (A) >1 (-) 0 (-) <0.05
rs55673156 chr1:54302824 NDC1 C - 13 T vs. C 0.067 (T) 0.058 (T) >1 (-) 0 (-) <0.05
rs72662336 chr1:54298297 NDC1 C - 13 T vs. C 0.058 (C) 0.067 (C) <1 (-) 0 (-) <0.05
rs59156571 chr1:54298716 NDC1 C - 13 C vs. G 0.067 (G) 0.067 (G) <1 (-) 0 (-) <0.05
rs34640823 chr1:54300430 NDC1 C - 13 A vs. C 0.308 (A) 0.242 (A) >1 (-) 0 (-) <0.05
rs17388535 chr1:54308972 NDC1 [+4439bp] C - 13 A vs. T 0.042 (T) - <1 (-) 0 (-) <0.05
rs17536501 chr1:54271830 NDC1 C - 13 T vs. C 0.025 (C) - <1 (-) 0 (-) <0.05
rs17388570 chr1:54311234 YIPF1 [-6158bp] C - 13 T vs. C 0.058 (T) 0.05 (T) >1 (-) 6 (-) <0.05
rs150382209 chr1:54312060 YIPF1 [-5332bp] C - 13 T vs. C - - >1 (-) 6 (-) <0.05
rs808860 chr1:54196929 GLIS1 C - 13 T vs. C 0.333 (C) 0.4 (C) <1 (-) 14 (-) <0.05
rs702490 chr1:54195018 GLIS1 C - 13 A vs. G 0.325 (A) 0.375 (A) >1 (-) 15 (-) <0.05
rs797906 chr1:54190695 GLIS1 C - 13 A vs. C 0.333 (A) 0.367 (A) >1 (-) 7 (-) <0.05
rs797907 chr1:54191089 GLIS1 C - 13 A vs. T 0.333 (T) 0.4 (T) <1 (-) 7 (-) <0.05
rs4927030 chr1:54182886 GLIS1 C - 13 A vs. C 0.342 (C) 0.4 (C) <1 (-) 17 (-) <0.05
rs10888811 chr1:54337886 YIPF1 C - 13 A vs. G 0.492 (A) 0.142 (G) <1 (-) 11 (-) <0.05
rs797909 chr1:54197141 GLIS1 C - 13 T vs. C 0.342 (T) 0.4 (T) >1 (-) 15 (-) <0.05
rs17384346 chr1:54187282 GLIS1 C - 13 T vs. C 0.333 (C) 0.417 (C) <1 (-) 8 (-) <0.05
rs1183026 chr1:54238396 NDC1 C - 9 A vs. T - - <1 (-) 53 (-) <0.05
rs115448697 chr1:54342517 YIPF1 C - 13 T vs. C 0.05 (C) - <1 (-) 23 (-) <0.05
rs113550892 chr1:54200114 GLIS1 [+237bp] C - 11 T vs. C - - <1 (-) 0 (-) >0.05
rs12406120 chr1:54195034 GLIS1 C - 13 T vs. C 0.15 (T) - >1 (-) 7 (-) >0.05
rs1181096 chr1:54326301 YIPF1 C - 13 A vs. C 0.367 (A) 0.35 (C) <1 (-) 0 (-) >0.05
rs1181097 chr1:54326490 YIPF1 C - 13 A vs. T 0.367 (A) 0.35 (T) <1 (-) 0 (-) >0.05
rs11206229 chr1:54324579 YIPF1 C - 13 A vs. G 0.367 (A) 0.35 (G) <1 (-) 0 (-) >0.05
rs79143828 chr1:54311653 YIPF1 [-5739bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs1181094 chr1:54320383 YIPF1 C - 13 T vs. G 0.375 (T) 0.35 (G) <1 (-) 0 (-) >0.05
rs7519869 chr1:54318411 YIPF1 C - 13 A vs. G 0.375 (A) 0.342 (G) <1 (-) 0 (-) >0.05
rs6588493 chr1:54328988 YIPF1 C - 13 A vs. C 0.367 (A) 0.35 (C) <1 (-) 0 (-) >0.05
rs7553929 chr1:54347583 YIPF1 C - 13 A vs. T - - <1 (-) 23 (-) >0.05
rs2015011 chr1:54349600 YIPF1 C - 13 T vs. C 0.45 (T) 0.092 (T) >1 (-) 22 (-) >0.05
rs1936835 chr1:54318765 YIPF1 C - 13 T vs. C 0.45 (C) 0.1 (C) <1 (-) 13 (-) >0.05
rs67497340 chr1:54318725 YIPF1 C - 13 C vs. G 0.45 (C) 0.1 (C) >1 (-) 13 (-) >0.05
rs926456 chr1:54354165 YIPF1 C - 13 A vs. G 0.483 (A) 0.125 (A) >1 (-) 30 (-) >0.05
rs11581991 chr1:54337972 YIPF1 C - 13 A vs. C 0.375 (A) 0.35 (C) <1 (-) 8 (-) >0.05
rs910298 chr1:54193701 GLIS1 C - 13 T vs. C 0.175 (C) - <1 (-) 3 (-) >0.05
rs6687200 chr1:54335640 YIPF1 C - 13 A vs. G - - <1 (-) 2 (-) >0.05
rs7548285 chr1:54353556 YIPF1 C - 13 C vs. G 0.492 (G) 0.125 (G) <1 (-) 29 (-) >0.05
rs10788966 chr1:54348220 YIPF1 C - 13 T vs. C 0.45 (C) 0.108 (C) <1 (-) 24 (-) >0.05
rs7526625 chr1:54353730 YIPF1 C - 13 A vs. C - - <1 (-) 31 (-) >0.05
rs12142958 chr1:54338639 YIPF1 C - 13 A vs. G 0.367 (A) 0.35 (G) <1 (-) 3 (-) >0.05
rs7526351 chr1:54353450 YIPF1 C - 13 T vs. C 0.483 (C) 0.125 (C) <1 (-) 31 (-) >0.05
rs12129074 chr1:54336046 YIPF1 C - 13 A vs. C 0.375 (C) 0.35 (A) >1 (-) 1 (-) >0.05
rs2272928 chr1:54344282 YIPF1 C - 13 A vs. C 0.45 (C) 0.1 (C) <1 (-) 22 (-) >0.05

Association studies for this region [+]