NDC1, chr1:54231133-54304533 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1181191 chr1:54224270 NDC1 [-6863bp] All: C 103,235 14 C vs. A - - 0.85 (0.78-0.91) 0 (0-17) 2.27e-05
Meta_image?name=rs1181191

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs12059719 chr1:54190333 GLIS1 C - 13 A vs. C 0.175 (C) 0.208 (C) <1 (-) 13 (-) >0.05
rs12043520 chr1:54184097 GLIS1 C - 13 A vs. G 0.192 (A) 0.225 (A) >1 (-) 13 (-) >0.05
rs1526911 chr1:54181942 GLIS1 C - 13 C vs. G 0.192 (G) 0.225 (G) <1 (-) 13 (-) >0.05
rs11206226 chr1:54320337 YIPF1 C - 13 A vs. G 0.058 (G) 0.075 (G) <1 (-) 29 (-) >0.05
rs1526910 chr1:54182174 GLIS1 C - 13 A vs. G 0.192 (A) 0.233 (A) >1 (-) 13 (-) >0.05
rs4927031 chr1:54183191 GLIS1 C - 13 T vs. C 0.192 (T) 0.225 (T) >1 (-) 13 (-) >0.05
rs115483054 chr1:54215327 GLIS1 [+15450bp] C - 13 A vs. G 0.208 (A) - >1 (-) 0 (-) >0.05
rs1181201 chr1:54303780 NDC1 C - 13 T vs. C 0.058 (T) - >1 (-) 41 (-) >0.05
rs11206219 chr1:54310214 NDC1 [+5681bp] C - 13 A vs. G - 0.067 (G) <1 (-) 37 (-) >0.05
rs12753977 chr1:54312428 YIPF1 [-4964bp] C - 13 T vs. C 0.058 (T) 0.067 (T) >1 (-) 33 (-) >0.05
rs7416528 chr1:54323528 YIPF1 C - 13 A vs. C - - >1 (-) 29 (-) >0.05
rs11206227 chr1:54323368 YIPF1 C - 13 T vs. C 0.058 (C) - <1 (-) 30 (-) >0.05
rs56326158 chr1:54189197 GLIS1 C - 13 A vs. G - - >1 (-) 15 (-) >0.05
rs12085757 chr1:54352197 YIPF1 C - 13 T vs. C 0.342 (T) 0.342 (C) <1 (-) 3 (-) >0.05
rs61774830 chr1:54340621 YIPF1 C - 13 T vs. G 0.058 (G) 0.067 (G) <1 (-) 28 (-) >0.05
rs4927032 chr1:54186489 GLIS1 C - 13 T vs. C 0.175 (T) 0.225 (T) >1 (-) 15 (-) >0.05
rs12091931 chr1:54191103 GLIS1 C - 13 A vs. G 0.192 (A) 0.2 (A) >1 (-) 14 (-) >0.05
rs56087009 chr1:54182502 GLIS1 C - 13 A vs. C 0.183 (C) 0.25 (C) <1 (-) 14 (-) >0.05
rs12022704 chr1:54323891 YIPF1 C - 13 T vs. C 0.058 (C) 0.067 (C) <1 (-) 29 (-) >0.05
rs12021519 chr1:54331152 YIPF1 C - 13 A vs. G 0.058 (A) 0.067 (A) >1 (-) 29 (-) >0.05
rs61774825 chr1:54339484 YIPF1 C - 13 A vs. T 0.058 (A) 0.075 (A) >1 (-) 28 (-) >0.05
rs34589111 chr1:54353126 YIPF1 C - 13 A vs. C 0.058 (C) 0.075 (C) <1 (-) 26 (-) >0.05
rs11206230 chr1:54325688 YIPF1 C - 13 T vs. C 0.058 (C) 0.075 (C) <1 (-) 29 (-) >0.05
rs12744108 chr1:54327983 YIPF1 C - 13 A vs. G 0.058 (G) 0.067 (G) <1 (-) 29 (-) >0.05
rs61774824 chr1:54338772 YIPF1 C - 13 A vs. G 0.058 (A) 0.067 (A) >1 (-) 28 (-) >0.05
rs61774823 chr1:54324598 YIPF1 C - 13 T vs. C 0.058 (T) - >1 (-) 29 (-) >0.05
rs12028193 chr1:54353785 YIPF1 C - 13 C vs. G 0.058 (C) - >1 (-) 26 (-) >0.05
rs61774817 chr1:54303469 NDC1 C - 13 T vs. G 0.058 (G) - <1 (-) 38 (-) >0.05
rs12725248 chr1:54296839 NDC1 C - 13 A vs. T - - <1 (-) 41 (-) >0.05
rs7538888 chr1:54307295 NDC1 [+2762bp] C - 13 T vs. C 0.058 (C) - <1 (-) 37 (-) >0.05
rs11206211 chr1:54188096 GLIS1 C - 13 T vs. C 0.192 (C) 0.225 (C) <1 (-) 11 (-) >0.05
rs12732418 chr1:54308631 NDC1 [+4098bp] C - 13 A vs. G - - <1 (-) 36 (-) >0.05
rs6657508 chr1:54346135 YIPF1 C - 13 A vs. G 0.45 (G) 0.1 (G) <1 (-) 20 (-) >0.05
rs11810159 chr1:54309582 NDC1 [+5049bp] C - 13 A vs. G 0.058 (G) 0.008 (G) <1 (-) 36 (-) >0.05
rs1181156 chr1:54276225 NDC1 C - 13 A vs. T 0.058 (T) - <1 (-) 40 (-) >0.05
rs12727907 chr1:54301944 NDC1 C - 13 A vs. G 0.058 (A) - >1 (-) 38 (-) >0.05
rs1181161 chr1:54219241 NDC1 [-11892bp] C - 13 T vs. C 0.342 (C) 0.267 (C) <1 (-) 12 (-) >0.05
rs1181186 chr1:54292026 NDC1 C - 13 A vs. G 0.058 (A) - >1 (-) 38 (-) >0.05
rs35647900 chr1:54294835 NDC1 C - 13 C vs. G 0.058 (G) - <1 (-) 39 (-) >0.05
rs1181193 chr1:54222119 NDC1 [-9014bp] C - 13 A vs. G 0.333 (A) 0.242 (A) >1 (-) 11 (-) >0.05
rs12744846 chr1:54298315 NDC1 C - 13 T vs. C 0.058 (T) - >1 (-) 38 (-) >0.05
rs79913066 chr1:54293128 NDC1 C - 13 A vs. T 0.058 (A) - >1 (-) 39 (-) >0.05
rs7555869 chr1:54285811 NDC1 C - 13 A vs. G - - >1 (-) 39 (-) >0.05
rs1018402 chr1:54349366 YIPF1 C - 13 A vs. T 0.45 (T) 0.083 (T) <1 (-) 23 (-) >0.05
rs12729768 chr1:54290029 NDC1 C - 13 T vs. C 0.058 (T) - >1 (-) 39 (-) >0.05
rs1181160 chr1:54219484 NDC1 [-11649bp] C - 13 A vs. G - - >1 (-) 8 (-) >0.05
rs35966749 chr1:54282325 NDC1 C - 13 A vs. C 0.058 (C) - <1 (-) 39 (-) >0.05
rs142995127 chr1:54353744 YIPF1 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs78770536 chr1:54196443 GLIS1 C - 11 T vs. C 0.017 (T) - <1 (-) 0 (-) >0.05
rs61774809 chr1:54264780 NDC1 C - 13 A vs. C 0.058 (A) - >1 (-) 39 (-) >0.05

Association studies for this region [+]