NDC1, chr1:54231133-54304533 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1181191 chr1:54224270 NDC1 [-6863bp] All: C 103,235 14 C vs. A - - 0.85 (0.78-0.91) 0 (0-17) 2.27e-05
Meta_image?name=rs1181191

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs12738083 chr1:54279562 NDC1 C - 13 T vs. C 0.058 (T) - >1 (-) 40 (-) >0.05
rs71503616 chr1:54257817 NDC1 C - 13 A vs. G - - >1 (-) 44 (-) >0.05
rs10749692 chr1:54348138 YIPF1 C - 13 T vs. C 0.45 (T) 0.158 (T) >1 (-) 23 (-) >0.05
rs7556247 chr1:54263332 NDC1 C - 13 T vs. C 0.058 (C) - <1 (-) 31 (-) >0.05
rs1181145 chr1:54272330 NDC1 C - 13 T vs. C 0.058 (T) - >1 (-) 40 (-) >0.05
rs1181146 chr1:54272063 NDC1 C - 13 A vs. T 0.058 (T) - <1 (-) 40 (-) >0.05
rs1181178 chr1:54265866 NDC1 C - 13 T vs. C 0.058 (C) - <1 (-) 39 (-) >0.05
rs12747819 chr1:54280994 NDC1 C - 13 A vs. G - - <1 (-) 39 (-) >0.05
rs76776153 chr1:54276154 NDC1 C - 13 A vs. G 0.05 (A) - >1 (-) 37 (-) >0.05
rs6588492 chr1:54328025 YIPF1 C - 12 A vs. G 0.45 (G) 0.1 (G) <1 (-) 27 (-) >0.05
rs61774804 chr1:54259909 NDC1 C - 13 A vs. G 0.058 (G) - <1 (-) 41 (-) >0.05
rs11586129 chr1:54351135 YIPF1 C - 13 T vs. C - - >1 (-) 21 (-) >0.05
rs55949318 chr1:54271441 NDC1 C - 13 A vs. C 0.05 (A) - >1 (-) 42 (-) >0.05
rs34088131 chr1:54252710 NDC1 C - 13 A vs. T 0.058 (A) - >1 (-) 43 (-) >0.05
rs144302278 chr1:54299559 NDC1 C - 8 T vs. C - - >1 (-) 0 (-) >0.05
rs72900609 chr1:54221402 NDC1 [-9731bp] C - 12 A vs. G 0.075 (G) 0.042 (G) <1 (-) 26 (-) >0.05
rs72900605 chr1:54211525 GLIS1 [+11648bp] C - 12 C vs. G 0.108 (C) 0.05 (C) >1 (-) 30 (-) >0.05
rs74416005 chr1:54340580 YIPF1 C - 8 T vs. C 0.025 (C) - <1 (-) 0 (-) >0.05
rs797908 chr1:54191958 GLIS1 C - 13 T vs. C 0.142 (T) 0.1 (T) >1 (-) 0 (-) >0.05
rs1725982 chr1:54211771 GLIS1 [+11894bp] C - 12 T vs. C 0.117 (C) 0.058 (C) <1 (-) 24 (-) >0.05
rs34605269 chr1:54246860 NDC1 C - 13 T vs. C 0.058 (C) - <1 (-) 44 (-) >0.05
rs41302750 chr1:54231832 NDC1 C - 13 T vs. C 0.058 (C) - <1 (-) 44 (-) >0.05
rs12746412 chr1:54228278 NDC1 [-2855bp] C - 13 T vs. C 0.067 (T) - >1 (-) 44 (-) >0.05
rs1614395 chr1:54181668 GLIS1 C - 13 A vs. G 0.233 (G) 0.25 (G) <1 (-) 0 (-) >0.05
rs7547962 chr1:54190045 GLIS1 C - 13 T vs. C 0.142 (T) 0.167 (T) >1 (-) 0 (-) >0.05
rs1883453 chr1:54331763 YIPF1 C - 13 A vs. G 0.425 (G) 0.275 (A) >1 (-) 14 (-) >0.05
rs141724378 chr1:54335769 YIPF1 C - 7 T vs. C - - <1 (-) 6 (-) >0.05
rs71637818 chr1:54233511 NDC1 C - 13 T vs. C 0.058 (C) - <1 (-) 45 (-) >0.05
rs6671310 chr1:54333204 YIPF1 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs146250803 chr1:54260532 NDC1 C - 8 A vs. G - - >1 (-) 0 (-) >0.05
rs12031700 chr1:54186445 GLIS1 C - 13 T vs. C 0.142 (T) 0.117 (T) >1 (-) 0 (-) >0.05
rs28396152 chr1:54188904 GLIS1 C - 13 T vs. C 0.15 (C) 0.125 (C) <1 (-) 0 (-) >0.05
rs9803748 chr1:54186786 GLIS1 C - 13 A vs. G 0.142 (G) 0.192 (G) <1 (-) 0 (-) >0.05
rs71637819 chr1:54240485 NDC1 C - 13 A vs. G 0.058 (A) - >1 (-) 45 (-) >0.05
rs34037846 chr1:54238825 NDC1 C - 13 T vs. C - - <1 (-) 45 (-) >0.05
rs11579257 chr1:54187449 GLIS1 C - 13 T vs. C 0.142 (T) 0.158 (T) >1 (-) 0 (-) >0.05
rs12043385 chr1:54189668 GLIS1 C - 13 A vs. G 0.142 (A) 0.142 (A) >1 (-) 0 (-) >0.05
rs4354491 chr1:54314043 YIPF1 [-3349bp] C - 13 T vs. C 0.2 (T) 0.192 (T) <1 (-) 0 (-) >0.05
rs41311158 chr1:54233542 NDC1 C - 13 A vs. G 0.033 (G) - <1 (-) 28 (-) >0.05
rs148295956 chr1:54352928 YIPF1 C - 9 T vs. C - - <1 (-) 0 (-) >0.05
rs145007396 chr1:54323619 YIPF1 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs149070786 chr1:54235295 NDC1 C - 6 C vs. G - - >1 (-) 0 (-) >0.05
rs2316320 chr1:54208890 GLIS1 [+9013bp] C - 13 T vs. C 0.233 (C) 0.183 (C) <1 (-) 0 (-) >0.05
rs797910 chr1:54198206 GLIS1 C - 13 A vs. G 0.025 (G) 0.225 (G) >1 (-) 0 (-) >0.05
rs111369990 chr1:54207709 GLIS1 [+7832bp] C - 13 T vs. C 0.025 (T) - <1 (-) 0 (-) >0.05
rs72660700 chr1:54223746 NDC1 [-7387bp] C - 6 A vs. G 0.017 (G) - >1 (-) 43 (-) >0.05
rs702489 chr1:54197688 GLIS1 C - 13 A vs. G 0.15 (A) 0.167 (A) >1 (-) 0 (-) >0.05
rs11206223 chr1:54314921 YIPF1 [-2471bp] C - 13 A vs. G 0.283 (A) 0.025 (A) >1 (-) 0 (-) >0.05
rs12120300 chr1:54345014 YIPF1 C - 13 A vs. G 0.125 (A) 0.175 (A) <1 (-) 0 (-) >0.05
rs11206225 chr1:54314930 YIPF1 [-2462bp] C - 13 T vs. G 0.283 (G) - <1 (-) 0 (-) >0.05

Association studies for this region [+]