NDC1, chr1:54231133-54304533 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1181191 chr1:54224270 NDC1 [-6863bp] All: C 103,235 14 C vs. A - - 0.85 (0.78-0.91) 0 (0-17) 2.27e-05
Meta_image?name=rs1181191

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs75514548 chr1:54321013 YIPF1 C - 13 A vs. G 0.117 (A) - <1 (-) 0 (-) >0.05
rs72662344 chr1:54312425 YIPF1 [-4967bp] C - 13 C vs. G 0.3 (C) - >1 (-) 0 (-) >0.05
rs17109525 chr1:54345258 YIPF1 C - 13 A vs. G 0.125 (A) 0.175 (A) <1 (-) 0 (-) >0.05
rs761490 chr1:54216654 NDC1 [-14479bp] C - 13 C vs. G 0.217 (C) 0.167 (C) >1 (-) 0 (-) >0.05
rs72662347 chr1:54318438 YIPF1 C - 13 T vs. C 0.117 (C) 0.167 (C) >1 (-) 0 (-) >0.05
rs61456454 chr1:54313553 YIPF1 [-3839bp] C - 13 A vs. G 0.3 (G) - <1 (-) 0 (-) >0.05
rs6588488 chr1:54215812 NDC1 [-15321bp] C - 13 T vs. C 0.217 (C) 0.233 (C) <1 (-) 0 (-) >0.05
rs17109454 chr1:54322418 YIPF1 C - 13 T vs. C 0.125 (C) 0.175 (C) >1 (-) 0 (-) >0.05
rs143633884 chr1:54210756 GLIS1 [+10879bp] C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs6681067 chr1:54328358 YIPF1 C - 13 A vs. G 0.125 (A) 0.175 (A) <1 (-) 0 (-) >0.05
rs79380987 chr1:54198205 GLIS1 C - 13 T vs. C 0.075 (T) - >1 (-) 0 (-) >0.05
rs1183394 chr1:54222571 NDC1 [-8562bp] C - 13 A vs. G 0.133 (A) 0.175 (A) <1 (-) 0 (-) >0.05
rs35859571 chr1:54319977 YIPF1 C - 13 T vs. G 0.117 (T) 0.175 (T) <1 (-) 0 (-) >0.05
rs148563942 chr1:54200597 GLIS1 [+720bp] C - 7 T vs. C - - >1 (-) 0 (-) >0.05
rs12118172 chr1:54339657 YIPF1 C - 13 T vs. C 0.125 (C) 0.167 (C) >1 (-) 0 (-) >0.05
rs139668419 chr1:54337617 YIPF1 C - 3 C vs. G - - >1 (-) 43 (-) >0.05
rs56320848 chr1:54320905 YIPF1 C - 13 T vs. C 0.4 (T) 0.042 (T) >1 (-) 0 (-) >0.05
rs116562318 chr1:54207344 GLIS1 [+7467bp] C - 8 T vs. C 0.008 (T) - <1 (-) 9 (-) >0.05
rs150286164 chr1:54191719 GLIS1 C - 7 A vs. G - - <1 (-) 0 (-) >0.05
rs12743572 chr1:54345595 YIPF1 C - 13 T vs. C - - >1 (-) 8 (-) >0.05
rs76103914 chr1:54341967 YIPF1 C - 11 A vs. G 0.008 (A) 0.033 (A) <1 (-) 29 (-) >0.05
rs75820566 chr1:54187349 GLIS1 C - 13 A vs. G 0.033 (A) - <1 (-) 9 (-) >0.05
rs3013763 chr1:54198925 GLIS1 C - 13 T vs. C 0.258 (C) 0.25 (C) <1 (-) 30 (-) >0.05
rs797913 chr1:54198562 GLIS1 C - 13 T vs. C 0.1 (T) 0.058 (T) >1 (-) 3 (-) >0.05
rs61774822 chr1:54323705 YIPF1 C - 12 T vs. C 0.092 (C) - >1 (-) 0 (-) >0.05
rs12075528 chr1:54199484 GLIS1 C - 13 T vs. C 0.117 (T) - >1 (-) 0 (-) >0.05
rs12095931 chr1:54199218 GLIS1 C - 13 C vs. G 0.117 (C) - >1 (-) 0 (-) >0.05
rs146789791 chr1:54330591 YIPF1 C - 5 A vs. G - - <1 (-) 1 (-) >0.05
rs761489 chr1:54204448 GLIS1 [+4571bp] C - 13 A vs. C 0.108 (C) - <1 (-) 0 (-) >0.05
rs797905 chr1:54203608 GLIS1 [+3731bp] C - 13 T vs. C 0.117 (T) 0.033 (T) >1 (-) 0 (-) >0.05
rs11206212 chr1:54193922 GLIS1 C - 8 C vs. G - 0.133 (C) <1 (-) 0 (-) >0.05
rs797912 chr1:54198417 GLIS1 C - 13 T vs. C 0.142 (C) 0.192 (C) <1 (-) 0 (-) >0.05
rs702488 chr1:54204324 GLIS1 [+4447bp] C - 13 T vs. C 0.133 (T) 0.133 (T) >1 (-) 2 (-) >0.05
rs35314517 chr1:54350260 YIPF1 C - 13 T vs. G 0.15 (T) 0.383 (T) <1 (-) 0 (-) >0.05
rs75348889 chr1:54205185 GLIS1 [+5308bp] C - 13 C vs. G 0.117 (C) - >1 (-) 0 (-) >0.05
rs797902 chr1:54205759 GLIS1 [+5882bp] C - 13 T vs. C 0.117 (C) 0.05 (C) <1 (-) 0 (-) >0.05
rs797900 chr1:54207274 GLIS1 [+7397bp] C - 13 A vs. G 0.117 (A) - >1 (-) 0 (-) >0.05
rs151293889 chr1:54346114 YIPF1 C - 3 A vs. G - - <1 (-) 60 (-) >0.05
rs116444243 chr1:54319899 YIPF1 C - 5 T vs. C 0.025 (C) - >1 (-) 0 (-) >0.05
rs78645289 chr1:54293297 NDC1 C - 7 T vs. C 0.033 (T) - <1 (-) 0 (-) >0.05
rs115916161 chr1:54261335 NDC1 C - 7 T vs. C 0.025 (T) - <1 (-) 0 (-) >0.05
rs797899 chr1:54207814 GLIS1 [+7937bp] C - 13 C vs. G 0.117 (C) 0.05 (C) >1 (-) 0 (-) >0.05
rs797898 chr1:54208046 GLIS1 [+8169bp] C - 13 T vs. C 0.117 (T) 0.05 (T) >1 (-) 0 (-) >0.05
rs1185370 chr1:54210713 GLIS1 [+10836bp] C - 13 T vs. C 0.117 (T) 0.05 (T) >1 (-) 0 (-) >0.05
rs809522 chr1:54209984 GLIS1 [+10107bp] C - 13 T vs. C 0.117 (T) 0.05 (T) >1 (-) 0 (-) >0.05
rs797895 chr1:54210123 GLIS1 [+10246bp] C - 13 C vs. G 0.117 (C) 0.05 (C) >1 (-) 0 (-) >0.05
rs12037642 chr1:54333168 YIPF1 C - 13 A vs. C - - >1 (-) 11 (-) >0.05
rs702487 chr1:54208626 GLIS1 [+8749bp] C - 13 T vs. C 0.117 (T) 0.05 (T) >1 (-) 0 (-) >0.05
rs797897 chr1:54208205 GLIS1 [+8328bp] C - 13 A vs. G 0.117 (G) 0.05 (G) <1 (-) 0 (-) >0.05
rs797896 chr1:54208835 GLIS1 [+8958bp] C - 13 T vs. C 0.117 (T) 0.05 (T) >1 (-) 0 (-) >0.05

Association studies for this region [+]