NLRC4, chr2:32449522-32490923 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs398290 chr2:32503526 YIPF4 All: C 108,990 15 T vs. C 0.292 (T) 0.442 (C) 0.93 (0.90-0.96) 0 (0-30) 7.23e-06
Meta_image?name=rs398290

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs71446056 chr2:32413804 SLC30A6 C - 13 A vs. G 0.092 (G) 0.125 (G) <1 (-) 0 (-) >0.05
rs35560333 chr2:32423330 SLC30A6 C - 13 A vs. G 0.092 (G) 0.125 (G) <1 (-) 0 (-) >0.05
rs11895623 chr2:32418729 SLC30A6 C - 13 A vs. G 0.092 (G) 0.117 (G) <1 (-) 0 (-) >0.05
rs6726255 chr2:32494285 NLRC4 [+3362bp] C - 13 A vs. G 0.092 (G) 0.117 (G) <1 (-) 0 (-) >0.05
rs7589416 chr2:32485522 NLRC4 C - 13 A vs. C 0.075 (A) - >1 (-) 15 (-) >0.05
rs11895183 chr2:32400596 SLC30A6 C - 13 C vs. G 0.092 (C) 0.092 (C) >1 (-) 0 (-) >0.05
rs79274122 chr2:32452004 NLRC4 C - 13 C vs. G 0.042 (G) 0.05 (G) <1 (-) 0 (-) >0.05
rs76571118 chr2:32452001 NLRC4 C - 13 A vs. T 0.042 (A) 0.05 (A) >1 (-) 0 (-) >0.05
rs77803927 chr2:32424432 SLC30A6 C - 13 T vs. G 0.092 (G) 0.117 (G) <1 (-) 0 (-) >0.05
rs419301 chr2:32497236 YIPF4 [-5743bp] C - 13 C vs. G 0.433 (G) 0.358 (G) <1 (-) 0 (-) >0.05
rs116275523 chr2:32484679 NLRC4 C - 6 A vs. G 0.008 (G) - >1 (-) 19 (-) >0.05
rs6741519 chr2:32531681 YIPF4 C - 11 T vs. C 0.017 (C) - >1 (-) 0 (-) >0.05
rs76202333 chr2:32532116 YIPF4 C - 11 A vs. G 0.017 (A) - <1 (-) 0 (-) >0.05
rs72865574 chr2:32525770 YIPF4 C - 11 T vs. G 0.017 (T) - <1 (-) 0 (-) >0.05
rs72865577 chr2:32530384 YIPF4 C - 11 A vs. G - - <1 (-) 0 (-) >0.05
rs76384199 chr2:32524215 YIPF4 C - 11 T vs. C 0.017 (C) - >1 (-) 0 (-) >0.05
rs57272947 chr2:32522270 YIPF4 C - 11 T vs. C - - <1 (-) 0 (-) >0.05
rs6755587 chr2:32524944 YIPF4 C - 11 C vs. G - - >1 (-) 0 (-) >0.05
rs72865568 chr2:32521300 YIPF4 C - 11 T vs. C 0.017 (T) - <1 (-) 0 (-) >0.05
rs72865567 chr2:32520645 YIPF4 C - 11 T vs. C 0.017 (T) - <1 (-) 0 (-) >0.05
rs55665681 chr2:32523424 YIPF4 C - 11 A vs. G - - <1 (-) 0 (-) >0.05
rs72865565 chr2:32514732 YIPF4 C - 11 T vs. C 0.025 (C) - >1 (-) 0 (-) >0.05
rs78997314 chr2:32513569 YIPF4 C - 11 A vs. T - - <1 (-) 0 (-) >0.05
rs112641895 chr2:32538881 YIPF4 C - 11 T vs. C - - <1 (-) 0 (-) >0.05
rs79892028 chr2:32458118 NLRC4 C - 13 T vs. C 0.092 (C) - <1 (-) 11 (-) >0.05
rs72865564 chr2:32504012 YIPF4 C - 9 A vs. G - - >1 (-) 6 (-) >0.05
rs72865581 chr2:32537133 YIPF4 C - 10 A vs. C 0.017 (C) - >1 (-) 0 (-) >0.05
rs113113884 chr2:32509766 YIPF4 C - 10 A vs. G - - >1 (-) 0 (-) >0.05
rs115648330 chr2:32441151 SLC30A6 C - 3 A vs. G 0.008 (A) - <1 (-) 0 (-) >0.05
rs139257022 chr2:32409695 SLC30A6 C - 3 A vs. G - - <1 (-) 0 (-) >0.05
rs6757121 chr2:32449261 SLC30A6 C - 13 T vs. C 0.092 (T) 0.117 (T) >1 (-) 0 (-) >0.05
rs13423310 chr2:32470023 NLRC4 C - 13 T vs. G 0.075 (T) - >1 (-) 14 (-) >0.05
rs112397595 chr2:32512206 YIPF4 C - 10 T vs. C - - <1 (-) 0 (-) >0.05
rs62134028 chr2:32457939 NLRC4 C - 13 A vs. T 0.092 (T) - <1 (-) 3 (-) >0.05
rs79339040 chr2:32437414 SLC30A6 C - 3 A vs. G - - <1 (-) 0 (-) >0.05
rs113021069 chr2:32505309 YIPF4 C - 10 A vs. G - - <1 (-) 0 (-) >0.05
rs148904546 chr2:32505606 YIPF4 C - 10 T vs. C - - <1 (-) 0 (-) >0.05
rs59675286 chr2:32498259 YIPF4 [-4720bp] C - 10 A vs. C - - <1 (-) 0 (-) >0.05
rs80037272 chr2:32443314 SLC30A6 C - 13 A vs. G 0.075 (G) 0.125 (G) <1 (-) 0 (-) >0.05
rs77890389 chr2:32448506 SLC30A6 C - 13 A vs. C 0.092 (A) 0.133 (A) >1 (-) 0 (-) >0.05
rs60906113 chr2:32452144 NLRC4 C - 13 T vs. C 0.092 (T) 0.125 (T) >1 (-) 0 (-) >0.05
rs116037274 chr2:32436217 SLC30A6 C - 6 A vs. G 0.017 (A) - <1 (-) 0 (-) >0.05
rs79053728 chr2:32478255 NLRC4 C - 7 C vs. G - - <1 (-) 10 (-) >0.05
rs139207991 chr2:32449231 SLC30A6 C - 8 T vs. C - - <1 (-) 0 (-) >0.05
rs28713298 chr2:32400532 SLC30A6 C - 13 T vs. C 0.092 (C) - <1 (-) 0 (-) >0.05
rs385076 chr2:32489851 NLRC4 C - 13 T vs. C 0.267 (T) 0.458 (C) <1 (-) 0 (-) >0.05
rs60266202 chr2:32501369 YIPF4 [-1610bp] C - 13 T vs. G - - >1 (-) 0 (-) >0.05
rs17011863 chr2:32407674 SLC30A6 C - 13 C vs. G 0.092 (G) - <1 (-) 3 (-) >0.05
rs56349188 chr2:32511663 YIPF4 C - 13 A vs. G 0.083 (A) - >1 (-) 24 (-) >0.05
rs116040574 chr2:32425994 SLC30A6 C - 12 T vs. C 0.017 (T) - <1 (-) 5 (-) >0.05

Association studies for this region [+]