NLRC4, chr2:32449522-32490923 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs398290 chr2:32503526 YIPF4 All: C 108,990 15 T vs. C 0.292 (T) 0.442 (C) 0.93 (0.90-0.96) 0 (0-30) 7.23e-06
Meta_image?name=rs398290

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs138529890 chr2:32478354 NLRC4 C - 11 A vs. G - - >1 (-) 0 (-) >0.05
rs437764 chr2:32516378 YIPF4 C - 13 T vs. C 0.492 (T) 0.367 (T) >1 (-) 0 (-) >0.05
rs398574 chr2:32538479 YIPF4 C - 11 C vs. G 0.033 (G) - >1 (-) 0 (-) >0.05
rs62134020 chr2:32407688 SLC30A6 C - 13 T vs. C 0.092 (T) - >1 (-) 1 (-) >0.05
rs444226 chr2:32499167 YIPF4 [-3812bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs433248 chr2:32499173 YIPF4 [-3806bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs143949361 chr2:32518557 YIPF4 C - 13 T vs. C - - <1 (-) 14 (-) >0.05
rs10199511 chr2:32409007 SLC30A6 C - 13 A vs. G 0.092 (A) - >1 (-) 1 (-) >0.05
rs115631838 chr2:32439307 SLC30A6 C - 12 A vs. G 0.042 (A) - >1 (-) 18 (-) >0.05
rs2366737 chr2:32414655 SLC30A6 C - 13 T vs. C - - >1 (-) 4 (-) >0.05
rs28434610 chr2:32408218 SLC30A6 C - 13 T vs. G - - <1 (-) 0 (-) >0.05
rs212684 chr2:32433058 SLC30A6 C - 13 C vs. G - - >1 (-) 17 (-) >0.05
rs212685 chr2:32434701 SLC30A6 C - 13 A vs. G 0.233 (A) 0.433 (A) <1 (-) 18 (-) >0.05
rs78404737 chr2:32507477 YIPF4 C - 13 A vs. G 0.083 (G) - >1 (-) 0 (-) >0.05
rs62134040 chr2:32500172 YIPF4 [-2807bp] C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs212682 chr2:32432864 SLC30A6 C - 13 A vs. G - - <1 (-) 4 (-) >0.05
rs212739 chr2:32404703 SLC30A6 C - 13 A vs. G 0.308 (A) 0.392 (G) <1 (-) 0 (-) >0.05
rs72863977 chr2:32439281 SLC30A6 C - 12 A vs. G 0.075 (A) 0.075 (A) >1 (-) 0 (-) >0.05
rs466146 chr2:32539236 YIPF4 C - 13 T vs. G 0.5 (G) 0.375 (G) <1 (-) 27 (-) >0.05
rs143116995 chr2:32536134 YIPF4 C - 8 A vs. G - - >1 (-) 0 (-) >0.05
rs2566483 chr2:32484467 NLRC4 C - 13 A vs. G 0.317 (G) 0.392 (A) >1 (-) 0 (-) >0.05
rs7579330 chr2:32507604 YIPF4 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs72863973 chr2:32437713 SLC30A6 C - 12 C vs. G 0.183 (G) 0.117 (G) <1 (-) 0 (-) >0.05
rs55796887 chr2:32431017 SLC30A6 C - 13 T vs. C 0.367 (C) - >1 (-) 2 (-) >0.05
rs116283582 chr2:32402970 SLC30A6 C - 9 T vs. G 0.017 (G) - >1 (-) 35 (-) >0.05
rs4952260 chr2:32534899 YIPF4 C - 13 T vs. C 0.033 (T) - >1 (-) 2 (-) >0.05
rs659239 chr2:32484569 NLRC4 C - 13 T vs. C 0.308 (T) 0.392 (C) <1 (-) 0 (-) >0.05
rs428002 chr2:32487774 NLRC4 C - 13 A vs. G 0.317 (G) 0.367 (A) >1 (-) 0 (-) >0.05
rs1153121 chr2:32524912 YIPF4 C - 13 A vs. G 0.492 (A) 0.367 (A) >1 (-) 0 (-) >0.05
rs186135 chr2:32432578 SLC30A6 C - 13 T vs. C - - >1 (-) 14 (-) >0.05
rs1265341 chr2:32488060 NLRC4 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs137978420 chr2:32455974 NLRC4 C - 4 A vs. G - - >1 (-) 60 (-) >0.05
rs11887458 chr2:32425630 SLC30A6 C - 12 C vs. G - - <1 (-) 0 (-) >0.05
rs435572 chr2:32488081 NLRC4 C - 13 A vs. G 0.292 (A) 0.392 (G) <1 (-) 0 (-) >0.05
rs212745 chr2:32412832 SLC30A6 C - 13 C vs. G 0.308 (C) 0.442 (G) <1 (-) 0 (-) >0.05
rs408813 chr2:32476390 NLRC4 C - 13 T vs. G 0.3 (T) 0.392 (G) <1 (-) 0 (-) >0.05
rs138302898 chr2:32502987 YIPF4 C - 5 C vs. G - - <1 (-) 0 (-) >0.05
rs212683 chr2:32432934 SLC30A6 C - 13 A vs. T - - <1 (-) 9 (-) >0.05
rs212746 chr2:32413067 SLC30A6 C - 13 T vs. C 0.308 (T) 0.442 (C) <1 (-) 0 (-) >0.05
rs212715 chr2:32460886 NLRC4 C - 13 C vs. G 0.3 (C) 0.408 (G) <1 (-) 0 (-) >0.05
rs212716 chr2:32460934 NLRC4 C - 13 A vs. G 0.3 (A) 0.4 (G) <1 (-) 0 (-) >0.05
rs212723 chr2:32467148 NLRC4 C - 13 A vs. C 0.308 (C) 0.467 (A) >1 (-) 0 (-) >0.05
rs212689 chr2:32437338 SLC30A6 C - 13 A vs. G 0.217 (G) 0.35 (G) >1 (-) 24 (-) >0.05
rs12466245 chr2:32455601 NLRC4 C - 9 T vs. C 0.058 (T) - >1 (-) 0 (-) >0.05
rs455060 chr2:32475109 NLRC4 C - 13 A vs. G 0.292 (G) 0.483 (A) >1 (-) 0 (-) >0.05
rs59398369 chr2:32522318 YIPF4 C - 8 T vs. G - - <1 (-) 15 (-) >0.05
rs62134039 chr2:32499979 YIPF4 [-3000bp] C - 13 A vs. G 0.033 (G) - <1 (-) 19 (-) >0.05
rs212728 chr2:32470307 NLRC4 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs212695 chr2:32440868 SLC30A6 C - 12 T vs. G 0.3 (G) 0.475 (G) >1 (-) 0 (-) >0.05
rs212690 chr2:32437631 SLC30A6 C - 13 C vs. G 0.217 (C) 0.342 (C) <1 (-) 24 (-) >0.05

Association studies for this region [+]