NLRC4, chr2:32449522-32490923 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs398290 chr2:32503526 YIPF4 All: C 108,990 15 T vs. C 0.292 (T) 0.442 (C) 0.93 (0.90-0.96) 0 (0-30) 7.23e-06
Meta_image?name=rs398290

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs212730 chr2:32471673 NLRC4 C - 13 T vs. G 0.292 (G) 0.483 (T) >1 (-) 0 (-) >0.05
rs212731 chr2:32472150 NLRC4 C - 13 A vs. G 0.292 (G) 0.483 (A) >1 (-) 0 (-) >0.05
rs177082 chr2:32438350 SLC30A6 C - 13 A vs. T 0.208 (A) 0.342 (A) <1 (-) 24 (-) >0.05
rs374743 chr2:32494190 NLRC4 [+3267bp] C - 13 T vs. G - - >1 (-) 0 (-) >0.05
rs6543653 chr2:32431321 SLC30A6 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs212737 chr2:32474291 NLRC4 C - 13 T vs. C 0.292 (T) 0.492 (C) <1 (-) 0 (-) >0.05
rs212732 chr2:32472417 NLRC4 C - 13 A vs. C - - >1 (-) 0 (-) >0.05
rs443609 chr2:32483593 NLRC4 C - 13 T vs. C 0.308 (C) 0.383 (T) >1 (-) 0 (-) >0.05
rs212717 chr2:32461640 NLRC4 C - 13 A vs. G 0.3 (G) 0.392 (A) >1 (-) 0 (-) >0.05
rs212727 chr2:32469728 NLRC4 C - 13 T vs. C 0.292 (C) 0.483 (T) >1 (-) 0 (-) >0.05
rs212725 chr2:32468602 NLRC4 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs113756644 chr2:32442001 SLC30A6 C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs438408 chr2:32495395 NLRC4 [+4472bp] C - 13 A vs. G 0.267 (G) 0.383 (A) >1 (-) 0 (-) >0.05
rs212724 chr2:32467489 NLRC4 C - 13 A vs. C 0.292 (A) 0.475 (C) <1 (-) 0 (-) >0.05
rs72796894 chr2:32455012 NLRC4 C - 9 A vs. G 0.042 (G) - <1 (-) 0 (-) >0.05
rs466125 chr2:32462092 NLRC4 C - 13 A vs. G 0.35 (G) 0.392 (A) >1 (-) 0 (-) >0.05
rs12475227 chr2:32504047 YIPF4 C - 12 A vs. C 0.108 (A) - <1 (-) 0 (-) >0.05
rs212726 chr2:32469385 NLRC4 C - 13 T vs. C 0.292 (T) 0.483 (C) <1 (-) 0 (-) >0.05
rs212733 chr2:32472640 NLRC4 C - 13 T vs. C 0.292 (T) 0.483 (C) <1 (-) 0 (-) >0.05
rs4952257 chr2:32509247 YIPF4 C - 13 T vs. C 0.033 (C) - <1 (-) 22 (-) >0.05
rs62134043 chr2:32504444 YIPF4 C - 13 A vs. G 0.033 (G) - <1 (-) 21 (-) >0.05
rs62134044 chr2:32505261 YIPF4 C - 13 A vs. G - - >1 (-) 21 (-) >0.05
rs142762371 chr2:32527376 YIPF4 C - 11 T vs. G - - <1 (-) 21 (-) >0.05
rs466126 chr2:32462094 NLRC4 C - 13 A vs. G 0.358 (G) 0.392 (A) >1 (-) 0 (-) >0.05
rs212735 chr2:32473088 NLRC4 C - 13 C vs. G 0.292 (C) 0.492 (G) <1 (-) 0 (-) >0.05
rs62134045 chr2:32511200 YIPF4 C - 13 A vs. G 0.033 (G) - <1 (-) 26 (-) >0.05
rs61439415 chr2:32502507 YIPF4 [-472bp] C - 13 A vs. G 0.025 (G) - <1 (-) 21 (-) >0.05
rs138857701 chr2:32466328 NLRC4 C - 4 C vs. G - - >1 (-) 44 (-) >0.05
rs111373339 chr2:32496404 NLRC4 [+5481bp] C - 8 T vs. C 0.008 (T) - <1 (-) 35 (-) >0.05
rs72798728 chr2:32513577 YIPF4 C - 13 C vs. G 0.033 (C) - >1 (-) 20 (-) >0.05
rs409188 chr2:32495471 NLRC4 [+4548bp] C - 11 A vs. C 0.242 (A) 0.133 (A) >1 (-) 0 (-) >0.05
rs36107816 chr2:32444197 SLC30A6 C - 12 C vs. G - - >1 (-) 0 (-) >0.05
rs72798733 chr2:32516380 YIPF4 C - 13 A vs. G 0.033 (G) 0.008 (G) <1 (-) 20 (-) >0.05
rs149614505 chr2:32468838 NLRC4 C - 11 A vs. C - - >1 (-) 0 (-) >0.05
rs114619308 chr2:32400896 SLC30A6 C - 9 T vs. G 0.008 (T) - >1 (-) 0 (-) >0.05
rs4952259 chr2:32524626 YIPF4 C - 13 T vs. C 0.017 (T) - >1 (-) 19 (-) >0.05
rs212700 chr2:32443869 SLC30A6 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs212722 chr2:32466607 NLRC4 C - 13 C vs. G - - >1 (-) 0 (-) >0.05
rs212701 chr2:32444054 SLC30A6 C - 13 T vs. C 0.283 (T) 0.475 (C) <1 (-) 0 (-) >0.05
rs212721 chr2:32466029 NLRC4 C - 13 A vs. G 0.258 (A) 0.483 (G) <1 (-) 0 (-) >0.05
rs115376726 chr2:32527681 YIPF4 C - 13 T vs. C 0.017 (C) - >1 (-) 0 (-) >0.05
rs111594663 chr2:32510811 YIPF4 C - 12 A vs. G - - <1 (-) 14 (-) >0.05
rs148797527 chr2:32538473 YIPF4 C - 11 C vs. G - - >1 (-) 0 (-) >0.05
rs212734 chr2:32472753 NLRC4 C - 13 A vs. G 0.283 (A) 0.492 (G) <1 (-) 0 (-) >0.05
rs71446057 chr2:32414391 SLC30A6 C - 10 T vs. C 0.05 (T) - <1 (-) 0 (-) >0.05
rs62134050 chr2:32535718 YIPF4 C - 13 C vs. G 0.033 (C) - >1 (-) 17 (-) >0.05
rs62134033 chr2:32479967 NLRC4 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs212699 chr2:32443519 SLC30A6 C - 13 A vs. G 0.283 (A) 0.475 (G) <1 (-) 0 (-) >0.05
rs62134042 chr2:32503928 YIPF4 C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs479333 chr2:32489158 NLRC4 C - 13 C vs. G 0.292 (C) 0.392 (G) <1 (-) 0 (-) >0.05

Association studies for this region [+]