NLRC4, chr2:32449522-32490923 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs398290 chr2:32503526 YIPF4 All: C 108,990 15 T vs. C 0.292 (T) 0.442 (C) 0.93 (0.90-0.96) 0 (0-30) 7.23e-06
Meta_image?name=rs398290

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs4952258 chr2:32509330 YIPF4 C - 13 A vs. G 0.05 (A) - >1 (-) 31 (-) >0.05
rs139622767 chr2:32513247 YIPF4 C - 10 A vs. G - - >1 (-) 0 (-) >0.05
rs141249832 chr2:32513751 YIPF4 C - 10 A vs. C - - <1 (-) 0 (-) >0.05
rs212749 chr2:32415977 SLC30A6 C - 13 T vs. C 0.4 (T) 0.442 (C) <1 (-) 0 (-) >0.05
rs212741 chr2:32408572 SLC30A6 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs212686 chr2:32434869 SLC30A6 C - 13 T vs. C 0.4 (C) 0.433 (T) >1 (-) 0 (-) >0.05
rs72798734 chr2:32516711 YIPF4 C - 12 C vs. G - - >1 (-) 17 (-) >0.05
rs212687 chr2:32435176 SLC30A6 C - 13 A vs. G 0.4 (G) 0.433 (A) >1 (-) 0 (-) >0.05
rs212744 chr2:32411788 SLC30A6 C - 13 C vs. G 0.4 (C) 0.45 (G) <1 (-) 0 (-) >0.05
rs212753 chr2:32421355 SLC30A6 C - 13 A vs. G 0.392 (G) 0.417 (A) >1 (-) 0 (-) >0.05
rs212740 chr2:32408194 SLC30A6 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs212706 chr2:32451132 NLRC4 C - 13 A vs. G 0.333 (A) 0.483 (G) >1 (-) 0 (-) >0.05
rs212708 chr2:32451446 NLRC4 C - 13 A vs. G 0.333 (A) 0.483 (G) >1 (-) 0 (-) >0.05
rs212707 chr2:32451148 NLRC4 C - 13 T vs. C 0.325 (C) 0.483 (T) <1 (-) 0 (-) >0.05
rs116362351 chr2:32408475 SLC30A6 C - 13 T vs. C 0.042 (T) - <1 (-) 16 (-) >0.05
rs212738 chr2:32403322 SLC30A6 C - 13 A vs. T 0.408 (T) 0.392 (A) >1 (-) 0 (-) >0.05
rs76027085 chr2:32403311 SLC30A6 C - 3 T vs. C - - >1 (-) 82 (-) >0.05
rs77521523 chr2:32453914 NLRC4 C - 5 A vs. G 0.008 (G) - >1 (-) 0 (-) >0.05
rs61045200 chr2:32496875 NLRC4 [+5952bp] C - 12 A vs. G 0.025 (G) - <1 (-) 30 (-) >0.05
rs147796448 chr2:32464727 NLRC4 C - 9 T vs. C - - <1 (-) 0 (-) >0.05
rs111934361 chr2:32433536 SLC30A6 C - 10 A vs. G - - >1 (-) 0 (-) >0.05
rs151219412 chr2:32468067 NLRC4 C - 5 T vs. G - - <1 (-) 43 (-) >0.05
rs140803144 chr2:32402779 SLC30A6 C - 7 T vs. G - - >1 (-) 0 (-) >0.05
rs116366987 chr2:32417845 SLC30A6 C - 4 T vs. C 0.008 (T) - <1 (-) 0 (-) >0.05
rs140503946 chr2:32445967 SLC30A6 C - 7 A vs. G - - >1 (-) 0 (-) >0.05
rs212703 chr2:32446613 SLC30A6 C - 13 A vs. G 0.392 (A) 0.392 (G) <1 (-) 0 (-) >0.05
rs212756 chr2:32424288 SLC30A6 C - 13 A vs. G 0.392 (A) 0.467 (A) <1 (-) 0 (-) >0.05
rs212752 chr2:32419903 SLC30A6 C - 13 T vs. C 0.383 (T) 0.458 (T) <1 (-) 0 (-) >0.05
rs212694 chr2:32438958 SLC30A6 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs212713 chr2:32457537 NLRC4 C - 13 T vs. C 0.4 (C) 0.483 (T) >1 (-) 0 (-) >0.05
rs148749808 chr2:32427357 SLC30A6 C - 10 A vs. G - - >1 (-) 0 (-) >0.05
rs112687939 chr2:32479582 NLRC4 C - 11 A vs. G - - >1 (-) 0 (-) >0.05
rs146067341 chr2:32427027 SLC30A6 C - 10 T vs. G - - >1 (-) 0 (-) >0.05
rs146367647 chr2:32427731 SLC30A6 C - 10 A vs. G - - >1 (-) 0 (-) >0.05
rs151126637 chr2:32428448 SLC30A6 C - 10 C vs. G - - >1 (-) 0 (-) >0.05
rs141378891 chr2:32464771 NLRC4 C - 10 T vs. C - - <1 (-) 0 (-) >0.05
rs72796885 chr2:32432200 SLC30A6 C - 8 A vs. T 0.025 (A) - <1 (-) 0 (-) >0.05
rs212697 chr2:32442494 SLC30A6 C - 6 A vs. G 0.008 (G) - >1 (-) 0 (-) >0.05
rs144194607 chr2:32467162 NLRC4 C - 10 A vs. G - - >1 (-) 0 (-) >0.05
rs6543652 chr2:32400764 SLC30A6 C - 5 A vs. G 0.008 (A) 0.0 (A) >1 (-) 0 (-) >0.05
rs212709 chr2:32453930 NLRC4 C - 6 T vs. C 0.008 (T) - <1 (-) 0 (-) >0.05
rs212688 chr2:32435374 SLC30A6 C - 6 A vs. G 0.008 (G) - >1 (-) 0 (-) >0.05
rs212719 chr2:32464462 NLRC4 C - 6 A vs. G 0.008 (A) - <1 (-) 0 (-) >0.05
rs144601632 chr2:32484935 NLRC4 C - 10 A vs. G - - <1 (-) 0 (-) >0.05
rs4258846 chr2:32402636 SLC30A6 C - 13 T vs. C - 0.392 (T) <1 (-) 0 (-) >0.05
rs212720 chr2:32465217 NLRC4 C - 6 T vs. G - - >1 (-) 0 (-) >0.05
rs212750 chr2:32417022 SLC30A6 C - 7 T vs. C - - <1 (-) 0 (-) >0.05
rs146888659 chr2:32420029 SLC30A6 C - 12 A vs. C - - >1 (-) 0 (-) >0.05
rs150652059 chr2:32422585 SLC30A6 C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs148950310 chr2:32417007 SLC30A6 C - 12 A vs. C - - <1 (-) 0 (-) >0.05

Association studies for this region [+]