NUPL2, chr7:23221446-23240630 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1637190 chr7:23269065 GPNMB [-6521bp] All: C 108,990 15 G vs. A 0.375 (G) 0.317 (G) 0.89 (0.87-0.92) 14 (0-52) 7.78e-12
Meta_image?name=rs1637190

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs117715796 chr7:23264689 GPNMB [-10897bp] All: C 103,470 14 T vs. C 0.025 (T) - 0.78 (0.70-0.88) 0 (0-41) 2.54e-05
rs117398425 chr7:23264688 GPNMB [-10898bp] All: C 103,470 14 A vs. C 0.025 (A) - 0.78 (0.70-0.88) 0 (0-41) 2.56e-05
rs55775122 chr7:23228758 NUPL2 All: C 108,990 15 G vs. A 0.125 (G) - 0.89 (0.84-0.94) 49 (8-72) 5.01e-05
rs706014 chr7:23275250 GPNMB [-336bp] C - 13 C vs. G 0.417 (C) 0.175 (C) >1 (-) 30 (-) <0.05
rs73086128 chr7:23188203 KLHL7 C - 13 A vs. T 0.433 (A) 0.15 (A) >1 (-) 34 (-) <0.05
rs75239735 chr7:23182564 KLHL7 C - 10 T vs. G 0.033 (T) - <1 (-) 0 (-) <0.05
rs12538942 chr7:23192726 KLHL7 C - 13 C vs. G 0.458 (G) 0.242 (G) <1 (-) 32 (-) <0.05
rs144422895 chr7:23286131 GPNMB C - 13 T vs. C - - <1 (-) 53 (-) <0.05
rs4719731 chr7:23271086 GPNMB [-4500bp] C - 13 A vs. T 0.208 (A) 0.375 (A) >1 (-) 0 (-) <0.05
rs76036890 chr7:23277372 GPNMB C - 13 A vs. G 0.058 (A) - <1 (-) 54 (-) <0.05
rs117435549 chr7:23253551 NUPL2 [+12921bp] C - 13 T vs. G 0.05 (G) - >1 (-) 55 (-) <0.05
rs76883725 chr7:23194400 KLHL7 C - 13 T vs. C 0.058 (T) - <1 (-) 58 (-) <0.05
rs12700416 chr7:23184666 KLHL7 C - 13 C vs. G 0.1 (G) 0.2 (G) <1 (-) 0 (-) <0.05
rs13240597 chr7:23284961 GPNMB C - 13 T vs. G 0.183 (G) 0.05 (G) <1 (-) 8 (-) <0.05
rs34575510 chr7:23209757 KLHL7 C - 10 T vs. C - - >1 (-) 0 (-) <0.05
rs17147930 chr7:23278903 GPNMB C - 10 C vs. G 0.05 (G) - <1 (-) 0 (-) <0.05
rs12700417 chr7:23195207 KLHL7 C - 13 T vs. C - - >1 (-) 0 (-) <0.05
rs28502783 chr7:23282960 GPNMB C - 10 T vs. G 0.05 (T) - <1 (-) 0 (-) <0.05
rs58856240 chr7:23186444 KLHL7 C - 7 A vs. T 0.008 (A) 0.258 (A) >1 (-) 10 (-) <0.05
rs78213073 chr7:23256951 NUPL2 [+16321bp] C - 10 C vs. G 0.058 (C) - <1 (-) 6 (-) <0.05
rs41273975 chr7:23236835 NUPL2 C - 11 A vs. G - - <1 (-) 0 (-) <0.05
rs73086142 chr7:23194401 KLHL7 C - 7 A vs. G 0.017 (A) 0.283 (A) >1 (-) 18 (-) <0.05
rs139440593 chr7:23277758 GPNMB C - 11 T vs. C - - <1 (-) 0 (-) >0.05
rs138530777 chr7:23209690 KLHL7 C - 9 A vs. G - - >1 (-) 0 (-) >0.05
rs10232205 chr7:23230554 NUPL2 C - 10 A vs. C 0.083 (C) - >1 (-) 0 (-) >0.05
rs148807573 chr7:23197017 KLHL7 C - 10 T vs. C - - >1 (-) 0 (-) >0.05
rs117173417 chr7:23192207 KLHL7 C - 10 A vs. G 0.008 (G) - <1 (-) 0 (-) >0.05
rs138218950 chr7:23178645 KLHL7 C - 10 A vs. G - - <1 (-) 0 (-) >0.05
rs11770879 chr7:23208043 KLHL7 C - 10 A vs. G 0.083 (A) - >1 (-) 0 (-) >0.05
rs199356 chr7:23288550 GPNMB C - 11 A vs. G - - <1 (-) 0 (-) >0.05
rs10234873 chr7:23264413 GPNMB [-11173bp] C - 10 T vs. G - - >1 (-) 39 (-) >0.05
rs76497142 chr7:23231803 NUPL2 C - 10 A vs. G 0.133 (A) - >1 (-) 22 (-) >0.05
rs7795053 chr7:23253361 NUPL2 [+12731bp] C - 10 A vs. G 0.033 (G) - >1 (-) 20 (-) >0.05
rs79298837 chr7:23179679 KLHL7 C - 8 A vs. C 0.017 (C) 0.133 (C) <1 (-) 0 (-) >0.05
rs141769898 chr7:23258179 GPNMB [-17407bp] C - 7 T vs. C - - >1 (-) 0 (-) >0.05
rs76076073 chr7:23176466 KLHL7 C - 8 C vs. G 0.008 (G) - <1 (-) 0 (-) >0.05
rs117213652 chr7:23189630 KLHL7 C - 7 C vs. G 0.017 (C) - >1 (-) 0 (-) >0.05
rs113396742 chr7:23202452 KLHL7 C - 9 C vs. G - - <1 (-) 0 (-) >0.05
rs17147940 chr7:23286284 GPNMB C - 4 A vs. G - 0.092 (G) <1 (-) 63 (-) >0.05
rs142066782 chr7:23172263 KLHL7 C - 6 C vs. G - - <1 (-) 0 (-) >0.05
rs144460857 chr7:23225427 NUPL2 C - 10 T vs. C - - >1 (-) 0 (-) >0.05
rs34832582 chr7:23234374 NUPL2 C - 7 A vs. C - - >1 (-) 0 (-) >0.05
rs117886838 chr7:23206391 KLHL7 C - 9 A vs. G 0.042 (G) - <1 (-) 0 (-) >0.05
rs860817 chr7:23251469 NUPL2 [+10839bp] C - 13 A vs. G 0.033 (A) - <1 (-) 0 (-) >0.05
rs6955934 chr7:23251499 NUPL2 [+10869bp] C - 13 T vs. G 0.033 (T) - <1 (-) 0 (-) >0.05
rs1728322 chr7:23232120 NUPL2 C - 13 C vs. G - - <1 (-) 0 (-) >0.05
rs858265 chr7:23210389 KLHL7 C - 12 C vs. G 0.025 (C) - >1 (-) 0 (-) >0.05
rs858285 chr7:23249518 NUPL2 [+8888bp] C - 13 T vs. C 0.033 (T) - <1 (-) 0 (-) >0.05
rs199358 chr7:23287875 GPNMB C - 13 A vs. G 0.025 (A) 0.017 (A) <1 (-) 0 (-) >0.05
rs6961813 chr7:23195123 KLHL7 C - 13 A vs. G - - >1 (-) 0 (-) >0.05

Association studies for this region [+]