PAQR6, chr1:156213206-156217881 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs3768276 chr1:156198366 PMF1-BGLAP C - 13 A vs. G 0.458 (G) 0.233 (A) >1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs3768276 chr1:156198366 PMF1-BGLAP C - 13 A vs. G 0.458 (G) 0.233 (A) >1 (-) 0 (-) <0.05
rs12122180 chr1:156244559 SMG5 C - 13 A vs. G 0.3 (A) 0.2 (A) >1 (-) 0 (-) <0.05
rs2842868 chr1:156196407 PMF1-BGLAP C - 13 T vs. G 0.342 (G) 0.033 (G) >1 (-) 18 (-) <0.05
rs1052067 chr1:156206121 PMF1-BGLAP C - 13 A vs. G 0.292 (A) 0.225 (A) <1 (-) 8 (-) <0.05
rs12146030 chr1:156233787 SMG5 C - 13 A vs. G - - >1 (-) 0 (-) <0.05
rs10908493 chr1:156247481 SMG5 C - 13 T vs. C - - >1 (-) 0 (-) <0.05
rs10908491 chr1:156208230 PMF1-BGLAP C - 13 A vs. G 0.458 (G) 0.5 (G) <1 (-) 33 (-) <0.05
rs2075166 chr1:156215562 PAQR6 C - 13 A vs. G 0.283 (A) 0.192 (A) >1 (-) 1 (-) <0.05
rs2540171 chr1:156195682 PMF1-BGLAP C - 13 A vs. G - - <1 (-) 18 (-) <0.05
rs2241106 chr1:156218910 SMG5 [-105bp] C - 13 C vs. G 0.3 (G) 0.208 (G) <1 (-) 1 (-) <0.05
rs12024813 chr1:156224529 SMG5 C - 13 A vs. C 0.3 (A) 0.208 (A) >1 (-) 0 (-) <0.05
rs909269 chr1:156192028 PMF1-BGLAP C - 13 T vs. C 0.333 (T) 0.033 (T) <1 (-) 16 (-) <0.05
rs12139321 chr1:156230429 SMG5 C - 13 A vs. G 0.3 (G) 0.208 (G) <1 (-) 0 (-) <0.05
rs12142203 chr1:156224951 SMG5 C - 13 A vs. G - - >1 (-) 0 (-) <0.05
rs12118238 chr1:156235221 SMG5 C - 13 A vs. G 0.3 (A) 0.208 (A) >1 (-) 0 (-) <0.05
rs11264463 chr1:156242806 SMG5 C - 13 A vs. G 0.308 (G) 0.2 (G) <1 (-) 0 (-) <0.05
rs2273832 chr1:156233143 SMG5 C - 13 A vs. G 0.3 (G) 0.208 (G) <1 (-) 0 (-) <0.05
rs11264462 chr1:156241728 SMG5 C - 13 A vs. G 0.3 (A) 0.2 (A) >1 (-) 0 (-) >0.05
rs2273833 chr1:156233189 SMG5 C - 13 T vs. C 0.3 (T) 0.208 (T) >1 (-) 0 (-) >0.05
rs12563631 chr1:156258953 TMEM79 C - 13 T vs. C 0.3 (C) 0.2 (C) <1 (-) 0 (-) >0.05
rs3806407 chr1:156251742 SMG5 C - 13 T vs. C 0.3 (C) 0.2 (C) <1 (-) 0 (-) >0.05
rs2247476 chr1:156190280 PMF1-BGLAP C - 13 A vs. C 0.342 (A) 0.033 (A) <1 (-) 20 (-) >0.05
rs12142808 chr1:156230546 SMG5 C - 13 A vs. G 0.3 (A) 0.208 (A) >1 (-) 1 (-) >0.05
rs2075163 chr1:156181833 SLC25A44 C - 3 T vs. G 0.008 (G) 0.292 (G) <1 (-) 0 (-) >0.05
rs2277871 chr1:156246742 SMG5 C - 13 A vs. G 0.3 (G) 0.2 (G) <1 (-) 0 (-) >0.05
rs11264464 chr1:156250887 SMG5 C - 13 T vs. G 0.3 (G) 0.2 (G) <1 (-) 0 (-) >0.05
rs3806408 chr1:156252137 SMG5 C - 13 A vs. C 0.3 (A) 0.2 (A) >1 (-) 0 (-) >0.05
rs28372828 chr1:156253031 TMEM79 C - 13 C vs. G 0.3 (C) 0.2 (C) >1 (-) 0 (-) >0.05
rs3806409 chr1:156252291 SMG5 C - 13 A vs. G 0.3 (G) 0.2 (G) <1 (-) 0 (-) >0.05
rs112597390 chr1:156256729 TMEM79 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs12038203 chr1:156248265 SMG5 C - 13 T vs. C 0.3 (T) 0.2 (T) >1 (-) 0 (-) >0.05
rs10752615 chr1:156248609 SMG5 C - 13 T vs. C 0.3 (C) 0.2 (C) <1 (-) 0 (-) >0.05
rs12038217 chr1:156248297 SMG5 C - 13 T vs. C 0.3 (T) 0.192 (T) >1 (-) 0 (-) >0.05
rs2277870 chr1:156246792 SMG5 C - 13 T vs. C 0.3 (T) 0.192 (T) >1 (-) 0 (-) >0.05
rs12027741 chr1:156248148 SMG5 C - 13 T vs. G 0.3 (G) 0.2 (G) <1 (-) 0 (-) >0.05
rs12027103 chr1:156244856 SMG5 C - 13 A vs. G 0.3 (A) 0.2 (A) >1 (-) 0 (-) >0.05
rs6679145 chr1:156256000 TMEM79 C - 13 T vs. C 0.3 (C) 0.2 (C) <1 (-) 0 (-) >0.05
rs2270291 chr1:156244992 SMG5 C - 13 C vs. G 0.3 (C) 0.2 (C) >1 (-) 0 (-) >0.05
rs12117947 chr1:156244058 SMG5 C - 13 A vs. T 0.3 (T) 0.2 (T) <1 (-) 0 (-) >0.05
rs10908495 chr1:156263940 C1orf85 C - 13 T vs. C 0.3 (C) 0.2 (C) <1 (-) 0 (-) >0.05
rs10908494 chr1:156263097 C1orf85 C - 13 A vs. G 0.3 (G) 0.183 (G) <1 (-) 0 (-) >0.05
rs6800 chr1:156262653 TMEM79 C - 13 A vs. C 0.3 (C) 0.2 (C) <1 (-) 0 (-) >0.05
rs12130361 chr1:156260301 TMEM79 C - 13 T vs. C 0.3 (T) 0.2 (T) >1 (-) 0 (-) >0.05
rs12023438 chr1:156254358 TMEM79 C - 13 A vs. G 0.3 (G) 0.2 (G) <1 (-) 0 (-) >0.05
rs34427109 chr1:156267804 VHLL [-611bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs10908496 chr1:156264000 C1orf85 C - 13 A vs. G 0.3 (A) 0.2 (A) >1 (-) 0 (-) >0.05
rs2736611 chr1:156205383 PMF1-BGLAP C - 13 A vs. C - - >1 (-) 0 (-) >0.05
rs2006302 chr1:156192351 PMF1-BGLAP C - 13 T vs. G - - <1 (-) 24 (-) >0.05
rs12121805 chr1:156257876 TMEM79 C - 13 A vs. G 0.3 (G) 0.183 (G) <1 (-) 0 (-) >0.05
rs41265025 chr1:156163906 SLC25A44 C - 13 T vs. C 0.342 (T) 0.033 (T) <1 (-) 27 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.